Cololabis saira (Pacific saury): 133455435
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Entry
133455435 CDS
T09849
Symbol
cacna1bb
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133455435 (cacna1bb)
04020 Calcium signaling pathway
133455435 (cacna1bb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133455435 (cacna1bb)
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133455435 (cacna1bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
133455435
NCBI-ProteinID:
XP_061590464
LinkDB
All DBs
Position
11:complement(39084194..39332809)
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AA seq
2496 aa
AA seq
DB search
MKRTVPYNSRWAERRSTVLYAVRAATFGSWRMLTLGSEYEDTWAVSPDRKQGPSKEVKED
SGDAEDPDVYAEELQESSWRAGQEEAGNKYDTVLHLVGERRAGPQDGVGQAIWKHDMLNN
SPLIWRMARFTEDLPPRYGGSAGGGGRGGPGAGRGGARGGGAPGGQRMYKQSMAQRARTM
AIYNPNPVKQNCLTVNRSLFIFREDNLIRKYAKRITEWPPFEYMILATIIANCIVLALEQ
HLPANDKTPMSERLDDTEPYFIGIFCFEAAIKIIALGFAFHKGSYLRNGWNVMDFVVVLT
GILATVGSDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVM
FAIIGVEFYMGKFHYTCFNNSTGERAADWPCGNEPPARTCPNGTVCREYWTGPNFGITNF
DNILFAVLTVFQCITMEGWVDILYHTNDVVGNTWNWAYFIPLIIIGSFFMLNLVLGVLSG
EFAKERERVEKRQEFLKLRRQQQIERELTGYLEWICKAEEVLLEEEDEIAEEKSPLDGAW
YKRKQNLSVLKRGKIKKVKNDLIGAEEGEDPFAEMSSIAPPSSPFGRASVKSAGKLDSSS
YFRRKEKRTRFFIRRMVKAQSFYWIVLCLVGLNTLCVAIVHYDQPEWLTTALYAAEFVFL
GLFLTEMTMKMYGLGPRNYFHSSFNCFDFGVIVGSIFEVIWDMIKPGASFGISVLRALRL
LRIFKVTKYWNSLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETP
TTNFDTFPAAILTVFQILTGEDWNAVMYHGIESQGGVHRGMFSSIYFIVLTLFGNYTLLN
VFLAIAVDNLANAQELTKDEEEQEEAANKKLAMQKALEVKEVSPMSAANISITAFVKQNR
DALSRRSSINSIQSPKEQLRSAKNKSIWEQRTTQLRRHNMKLSSEALFNELNPEERLRIS
STLHLHPEMKTHMDRPLRVQAKNGDQPNPPHEESTEEGSQLDGVGDSFHTHSRRHHRHRD
KNGEGGGSRGERYHMHHSRSREQNADGPQMKEGGGERNQRCDGGRHRQHHQAGSPEDEAS
DVQGGRGREERGHRHHHSHRTPKEGNGLLVNSAQGEGRGRGGNGGNGNGERKRRQSRMTR
AQSTLGRDECKRNDDKACRERQPDADEDSFACSPVNSNITLNAKQEDDDNQKNSSRASQV
GLNSNTIHIPVTITAPPGETTIIPMNNIEADNIQLSEEKKDLEDDEDAAEGPRQILPYSS
MFIFGQTNPVRRLCHYVVNLRYFEMCILMVITMSSITLAAEDPVQANAPRNNILKYLDYV
FTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFACSGTKGKDINTIKS
LRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFF
YCTDESKGLEKDCRGQFLDYDRDDVAAQPREWKKYEFHYDNVLWAFLTLFTVSTGEGWPL
VLKHSVDATYEDQGPSPGFRMETSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKAMSE
CSLEKNERACIDFAINAKPLTRYMPANKQSFQYKMWKFVVSPPFEYAIMTLIALNTVVLM
MKFYGAPDLYESMLKYLNIIFTGLFTLECILKIIAFSPLSYLKEPWNVFDFVTVIGSITD
ILFTEINNKMINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFF
IYAIIGMQVFGNIELIEESAINHHNNFQTFFQALTLLFRSATGEAWHEIMLACLSNRPCD
KLSGTAGTECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDASILGPHHLDEF
IRVWAEYDPAACGCMTYRNMYEMLRDMSPPLGLGKKCPPRVAYKRLVRMNMPIADDNTVH
FTSTLMALIRTALEIKLASGFLAQQLSDIDLRREINRVWPNLSQKTIDLLVTPHKYNELT
VGKVYAAHMIFDYYKQNQAKKLQQQNPSGVSQNKLGALFRPVLPFTHIHEVQPPISSPKP
PSPPPLKPELQQEPPAPRDTTLTQRNVIKHSQSGDVSQTAQRPKARRKLQRGQSEDVQYF
TKPQELVELKQVENLSDTEGYPILESHCRAASLPRLNAEYYRSHPRHAPGTHLAPIVDLS
PIKRSASSLTPQCHQEEAGLREFDLECVGQAHSSAGLGQVQQGQDRPHHHHHHHRCHRRR
DKDRRQKSLDKATSPHPSNTDGSPTEPPAEGLSRERARERDRSRPHERRHHSSAGEKQRY
YSCERYGSREQCHARSAGPSRSTSPGEAQDPSILKQGSSVVKTGTNTPGRGRRQLPQTPL
TPRPAVAYKTANSSALPSSVVATTAEHQTRASRGLSAHDRLPVGIKSPIPVTCIGSDPNL
SRQQLDSSQLALLEDTEDFEDAVSSHGGGRSARTAGSTTASATQGTADAPATAPATQGRA
AAVPNGYHFNLGVSSPSGPGNRGTGSLREREEDDWC
NT seq
7491 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacagttccttacaactcgagatgggcagagagacggtccacggtgctttat
gccgtacgtgcagccactttcggctcctggaggatgctcaccctggggtctgagtacgag
gacacctgggctgtgtcccctgacaggaagcaaggcccctcaaaagaagtcaaggaggat
tcaggtgatgccgaagacccagatgtctacgctgaagagttacaggagtcatcatggaga
gctggccaagaggaagccggaaacaagtatgacacggttttacacttggtcggtgaaaga
agagcaggaccgcaggacggtgtcggccaggccatctggaagcacgacatgctgaacaac
tccccactgatctggagaatggctcgattcacggaagatctccccccccgctacggaggc
agcgcaggcggcggagggagaggcggcccgggcgctggcagagggggagcccggggcgga
ggcgctccgggcggccagaggatgtacaagcagtcgatggcccagagagcccggactatg
gccatttacaaccccaatcccgtcaagcagaactgcctcactgtcaaccgctctctcttc
atcttccgtgaggacaatctcatcaggaagtatgcaaagcggataacagagtggcctcca
tttgaatatatgatcctggcaacgattatcgccaactgcatcgtcttggccttggagcaa
catctacctgctaatgacaagacgcccatgtcagaacgcctggatgacacagagccctac
tttattggaatattctgttttgaggctgccattaagatcattgccctgggctttgcattt
cataaaggctcctacctccgcaacggctggaatgtaatggacttcgtggtcgtcctcaca
ggaattcttgccacggtgggttcggactttgacctgagaacgctgcgagcggtgagagtg
ctgagacccctgaaactcgtgtcaggaatcccaagtctgcaggtggtgttgaagtccata
atgaaagccatggttccgttgcttcagattggtttgctgcttttctttgccatcgtcatg
tttgccattatcggggtggagttttacatgggaaaattccactacacctgcttcaacaac
agcacaggggagagagccgctgactggccttgtggtaatgagccccccgccaggacttgt
cccaatggaaccgtttgcagagagtactggactggacccaactttggcatcaccaacttc
gacaacatcctgtttgccgtgcttactgtattccagtgcatcaccatggagggctgggtg
gacatcctctaccacaccaatgacgttgtaggaaacacctggaactgggcgtacttcatc
cctctcatcatcatcggctcttttttcatgctcaatctggtcctcggtgtcctatcagga
gaatttgctaaagagcgcgagcgtgtggagaagaggcaggagttcctaaagctacggcga
caacagcagatcgagagagagctcactggatacttggagtggatctgcaaagcagaggaa
gtgttgctagaggaagaagatgagattgctgaagagaaatcaccgctggacggtgcgtgg
tacaagaggaaacaaaacctttcagttctgaagcgaggcaaaatcaaaaaggttaaaaac
gacttaattggtgctgaggagggggaagatccttttgctgaaatgtcctccattgctcca
cccagctcaccgtttggtcgcgcgagtgtgaaaagtgccggaaaactggacagctcctct
tacttccggcgaaaagaaaagaggacacgtttctttatccgtcgtatggtgaaagctcaa
agtttctactggattgttctgtgcttggtgggactcaacaccctgtgtgttgccatagtg
cactacgaccaaccagaatggcttacaacagctctctacgcagcagagtttgtgtttctg
ggtttgtttctcactgagatgactatgaagatgtacggccttggaccaagaaactacttc
cactcctcctttaactgctttgattttggtgtaattgttggaagcatttttgaggtgatt
tgggacatgattaaacctggagcatcatttggtatcagtgtcttgagggccttgagactt
ctcaggattttcaaagtcaccaaatattggaactcattgaggaatcttgtcgtttccctc
cttaactccatgaagtccatcatcagtttgctcttcctgctctttctcttcattgtcgtt
tttgcattgctgggtatgcagctctttggaggacagtttaattttgaggatgaaacacca
acaacaaactttgataccttcccagcagccatcctcactgtgttccaaattctgaccggt
gaggactggaacgctgtgatgtaccacggcattgagtcccaaggaggtgtacatcgcggc
atgttttcctccatctatttcattgtcctgacgctctttggaaactacaccctactgaat
gtgttcttggccattgctgttgacaacctcgcaaatgcccaggagttgactaaggatgaa
gaggaacaggaggaggcagccaataagaagcttgcaatgcagaaggcactagaagtgaag
gaagttagcccaatgtcagctgccaacatttcgatcactgcttttgtaaagcaaaatcga
gatgcactctctcgcaggtcgtccatcaacagcattcagtcacccaaggagcaactgcga
tctgcaaagaacaagtcaatatgggagcagaggacgacccaattgaggagacacaacatg
aagctgagcagtgaggccttgtttaatgaactcaacccagaggagcgcctccggatatcc
agcacccttcatctccatcctgaaatgaagactcatatggaccggccacttcgggtacag
gccaagaacggtgaccagcccaacccaccccatgaagaaagtacggaggagggttcccag
ctggatggggtgggtgacagcttccacacacactccaggaggcatcaccgccatcgtgac
aagaatggtgagggaggtggcagccggggagagagataccacatgcatcacagcaggagc
agagaacaaaatgcagacggcccccagatgaaagaggggggaggggagaggaaccagagg
tgtgatggaggcagacacagacaacaccaccaggctggatctcctgaggatgaggccagt
gatgtacagggggggagagggagagaggagagagggcatcgccaccatcactctcatcga
acaccaaaagaaggaaatggcttgttagtgaacagcgcacagggagagggcagaggaagg
ggtggaaatggagggaatggcaatggagagaggaaaagacgccaatctcgcatgaccaga
gctcagtctactttgggtcgagatgagtgcaagaggaacgatgacaaagcttgtcgagag
aggcagccagatgctgatgaggacagctttgcctgcagtcctgtgaacagtaacataact
cttaatgcaaagcaagaggatgatgacaaccagaagaactccagcagggccagccaggtt
ggcctcaacagcaacactatccacatccctgtcaccatcactgcacctcctggagaaacc
accatcatacccatgaataacattgaggctgacaacattcaactcagtgaagagaagaaa
gatttggaagacgatgaagatgcagccgaggggccccggcagatccttccctacagctca
atgttcatctttggacagacgaacccagtgcgacgcctgtgtcactatgtggtcaactta
cgctactttgagatgtgcatcctgatggtcattaccatgagcagcatcaccctagcggcc
gaggaccccgtgcaagccaacgcaccccggaacaatattctgaaatatctggactatgtc
tttactggggtcttcacatttgagatggtgattaagatgattgacctgggacttcttctc
caccctggctcctatttccgtgacctttggaacattcttgacttcatagtggtcagtgga
gccctggtggcctttgcttgctcaggcacaaaaggcaaagacatcaacaccattaagtca
ctcagagtcctcagagtcctgcggccactcaagaccattaaacggcttcccaagctgaag
gccgtgtttgactgcgttgtgaactctctgaagaacgttctcaacatcctcatcgtctac
atgctcttcatgttcatatttgccgtcatcgctgtgcagctgtttaagggcaagtttttc
tactgcacggatgagtcaaagggtctggaaaaagactgccggggacagtttctggactat
gacagggacgatgtggcggctcagcctagagagtggaagaagtacgagtttcactacgat
aatgttctctgggccttcctaacactctttaccgtctccactggagagggttggccactg
gtcctaaagcactctgtagatgccacgtatgaggaccagggccccagcccaggcttccgc
atggagacatccatcttttacgtggtctactttgtggttttcccctttttctttgtcaac
atatttgtggctttgatcatcataaccttccaagagcaaggagacaaggccatgtcggag
tgcagcttggagaaaaatgagagggcgtgtattgactttgccatcaatgccaagccgctt
acgagatacatgccggcgaacaagcagtccttccagtacaagatgtggaaatttgtggtg
tcgccaccttttgagtacgccatcatgactttaattgccctcaacacagtagtgctgatg
atgaagttctacggagctcctgatctgtatgagtcgatgctgaagtatttaaacatcatc
ttcactgggctcttcacattggagtgcatcctcaagattattgccttcagcccactgagc
tacctaaaggagccatggaatgtgtttgactttgtgaccgtgattggaagcatcacagac
attttgtttacagagataaataacaagatgataaacctgagtttcttgaggctcttcaga
gcagctcgtcttatcaagctgctgcgccagggctacaccatccgcatcttgctgtggact
ttcgttcagtccttcaaggccttgccatatgtgtgcctgcttattgccatgctgttcttc
atttatgccatcattggcatgcaggtgtttggtaacattgagctgattgaggaatctgcc
ataaatcaccacaacaacttccagacctttttccaggccttgactcttctgttcaggagc
gcgacaggcgaagcatggcatgaaatcatgctagcctgcctcagtaatcgaccatgtgat
aagctgtcgggaacggctgggacggaatgcggcagtgattttgcttacttctactttgtc
tcctttatcttcctctgctcctttctgatgttgaacctctttgttgctgtcatcatggac
aactttgaatacctgaccagagatgcctccattctggggcctcaccacctggatgaattc
attcgtgtttgggcagagtatgaccctgctgcgtgtggctgcatgacttatcgcaatatg
tatgagatgctgcgcgacatgtcgcccccgcttggtttgggaaagaaatgtccaccccga
gtcgcctataagcgattggtgaggatgaacatgccaattgcggatgacaacacggttcat
ttcacctccacgctgatggctctgattcgcacagctcttgagatcaaactggcatctggg
ttcctggcacagcagttgtctgatattgacctgaggagggagatcaaccgggtttggcca
aacctgtctcagaagaccattgacctgctggtgacgccacataaatataatgagctgact
gtggggaaggtctatgcagctcacatgatctttgactactacaagcagaaccaggcaaag
aagctccagcagcagaacccttcaggggtgtctcagaacaaactgggggcgctgtttcgt
cctgtgttgcccttcactcacatccacgaagtccagcctccaatctccagccccaagcca
ccttctcctcctccgctgaagccagaactgcaacaggagcccccagccccgagagacaca
acactaacccagagaaatgtcataaagcattcccagtctggagatgtttctcagacagct
cagaggccaaaagctcggaggaagcttcagagaggccagtcagaagatgtacaatatttc
acaaaaccccaggagttggttgaactgaagcaggtggaaaatctctcagacacagaggga
tatcccattctggagagccactgcagagcagcctctctacccaggctcaatgctgagtac
tatcggagccaccctcgccacgcccccgggacccacctggcaccgattgttgacctgagt
cccatcaaacgctctgcatcctccctgacccctcaatgccaccaagaggaggctgggctg
agggagtttgacctggagtgtgtgggtcaggctcattcctctgcagggctgggacaagtc
cagcagggacaggacagacctcaccaccatcaccaccaccaccgctgccatcgccgcagg
gacaaagacaggaggcaaaagtctttggataaagctacatcaccgcatccgtcaaacact
gacggttcacctacagagcctccagctgaaggcctgtccagagagcgagcgagggagcgg
gaccgcagtcgcccgcatgagaggaggcaccactcctcggcgggggagaagcagcgctac
tattcctgcgagcgttatggcagcagagagcagtgccacgcccggtcagccggtcccagc
cgatccacgtctccaggagaggctcaggaccccagcatcctcaaacagggtagcagcgtg
gtcaaaactggtacaaacactcccggccgagggcgccggcagcttccacagacacccctc
accccgcgtccagctgtggcctacaagacggccaactcctcagctctcccgtccagtgtt
gtcgccactacggcagaacatcagactcgcgccagccgtggcctttcagcgcacgatcgc
ctacccgttggcattaagtctccgatacccgtcacctgcataggttcagaccccaaccta
agccgccagcagctggactcctcccaactggccctccttgaggacacagaagactttgag
gatgctgttagtagccacggaggaggacgctcagccagaactgctggttccaccacagcc
tcagccacacagggcacagccgatgcacccgccacagcaccagccacgcagggacgggcg
gcagctgtgcctaacgggtaccacttcaacctcggagtcagttcaccatctggacctgga
aacagaggaacgggaagtctcagggagagggaggaagatgactggtgctaa
DBGET
integrated database retrieval system
