Cololabis saira (Pacific saury): 133455500
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Entry
133455500 CDS
T09849
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
133455500 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133455500 (myo5b)
04131 Membrane trafficking [BR:
csai04131
]
133455500 (myo5b)
03029 Mitochondrial biogenesis [BR:
csai03029
]
133455500 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133455500 (myo5b)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
133455500 (myo5b)
mRNA cycle factors
P-body specific factors
133455500 (myo5b)
Membrane trafficking [BR:
csai04131
]
Others
Actin-binding proteins
Myosins
133455500 (myo5b)
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
133455500 (myo5b)
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
133455500 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Denso_VP4
Myosin_N
AAA_22
NPHP3_N
AAA_16
nSTAND3
Motif
Other DBs
NCBI-GeneID:
133455500
NCBI-ProteinID:
XP_061590556
LinkDB
All DBs
Position
11:44282124..44367059
Genome browser
AA seq
1812 aa
AA seq
DB search
MATDYYPYIKYTRVWIPDPDDVWKAAEITKDYKEGDPVLHLKLEDEATLEYPVGPKANPL
PFLRNPDILVGENDLTALSYLHEPAVLHNLRVRFLESNHIYTYCGIVLVAINPYEQLQIY
GEEVINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKYAMRF
FATVGGSANDTNVEEKVLASNPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRHYHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFQELGLTSAEDFIYTSLGENIFIESV
NDAEELKKTREAFMLLGVKETSQSSIFKIIAAILHLGNIEISPERDQESCSVSSDDLYLQ
NFCRLLGVELQQMKHWLCHRKLATASETYVKSMSLKQALNARNALAKHIYARLFDWIVEH
VNKALHTSFKQHSFIGVLDIYGFETFEVNSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KELIPWTLIDFYDNQPCIDLIEARLGVLDLLDEECKVPKGTDKNWAEKLYKQNSSSAHFQ
KPRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASQFQMVADLFHEQGDAP
VAKSSRVNVRAAKTVPKYPNKEHRKTVGHQFRSSLHLLMETLNATSPHYVRCIKPNDEKE
CFSFDSRRAVQQLRACGVLETIRISAAGYPSRWTYQDFFSRYRVLMKKSDMTATDKKPVC
RNLLETLIKEPDMFQFGKTKIFFRAGQVAYLEKLRADRFRSACIKIQKTVRGWLQKLRYR
RIRKSAITLQRYGRGYLARRHAEFLRLSRAALICQKQYRMVRERRAYQRVRWAVVTIQAY
TRGMYTRRIYWEFMLHHKAMIIQKNVRGWLQRRKFIRARNAAITIQCAFRRMHAKRQLKQ
LKIEARSAQHLKNLNSGMENKIVQLQRKMDDQSKELRTQNNQLLSTNTTLGSELTRLQKQ
LEQVHSQPGDTGRVVSLQEEVERLREELQEAHNHRRKLEEEHGSEKLELTQRVEDLQREN
SQLKAEKEEINQQILQDSRSSEEETSRASLQLELDAERERYQNLLKEFGRLEQRFDNLKE
EVSLNKFHPGHRRTTSNQSSLESDSNYPSISTSEVGDTEDSIQLVDEMGVEKAAMDISLF
MKLQKRVRELEQERKKLQVNLDKMEELAKHKGSEPRSPSSDQEMADLAYNNLKRQELESE
NKKLKNDLNELRKTIGDHASQNNSSNQLQDSYNLLVSQLKAANEEMDARKEEVLILRTQI
LSNAELHERSKQMQETEKEAELNSKEPLDKEEALQAYHRLSESKRLLEAQLQTQSRQNQD
ELEALHTQIELLKADIESKQEMLNYTQSLSPEAKVEYSVQLEITRLTNKNLDLKELVEKL
EKNERKLKKQLRIYMKKVQELEASAAQSSSSKPELTHQVTVQRKEKDFEGMLEYSKEVEG
RLIQTLVKDIRPSMVSATVPCLPAYILLMCIRHTDYVNDDQKLSSLLTSTINAIKKVLKK
NNDFEMMSFWLANTSRLLHCLKQYSGEESFMTRNTDKQNEHCLKNFDLTEYRQVLSDLSI
QIYQQLVKVAEGIIQPMIVSAMLESESIPSLAGMKPMGYRNRSSSMDTDADGPTSYTLQA
LIRQLGQFHSIMQDHGLDPEITGQVVRQLFSCINAHTLNNLLLRKDVCSWSTGMQLRYNT
SQMEEWLRANNLYQSNAAETLEPIIQAAQLLQVKKKTSQDAEAICSLCTALTMQQIVKIM
NLYTPLNDFEERVTVSFIRNIQTCLQDRTERPQLLVDTKHVFPVHFPYSPSALTLDTLHI
PASLGLDFLTRV
NT seq
5439 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgactactacccgtacatcaagtacacacgggtgtggatcccggacccagac
gatgtgtggaaagctgcagagatcaccaaagactacaaggagggagatcctgtcctccac
ctgaagctggaggatgaagcgactctggagtacccagtgggtccaaaggcgaaccccctg
cctttcctgcggaacccggacatcctggtgggcgagaacgacctgacggctctcagttac
ctgcatgaacctgcagtgctgcacaacctgcgagtacgcttcctggagtccaaccacatc
tacacctactgcggcattgttctggtggccattaacccgtacgagcagctgcagatttac
ggagaagaggtgatcaatgcctacagcgggcagaacatgggggacatggacccccacata
ttcgctgtggccgaggaggcgtacaagcagatggccagagatgagaggaatcaatccatc
atcgtcagcggagaatctggagcagggaagacggtttctgccaagtacgccatgcgcttc
tttgccaccgtgggcggctctgcaaacgacaccaacgtggaggagaaggttctagcgtcc
aatcccatcatggaggccatcggaaacgccaaaaccacccggaatgacaacagcagccgc
ttcgggaagtacatccagatcggcttcagcagacactaccacataatcggggccaacatg
aggacgtacctgctggagaagtcccgcgtggtcttccaggccgaggacgagaggaactat
cacatcttctaccaactgtgtgcctcggccagtttaccagagttccaggagctcggcctc
accagtgctgaagacttcatctacacatctttaggagagaacatcttcattgagagcgtg
aacgatgctgaggagctgaagaagaccagagaggccttcatgctgctgggtgtgaaggag
accagccagagcagcatcttcaaaatcatcgccgccattctccatctgggcaacattgag
atttccccggagcgagatcaggagtcctgctcagtctcgagtgacgacctctatctgcag
aacttctgcaggctgctgggggtggagctgcagcagatgaagcactggctctgccacagg
aagctggccacggcgtctgaaacctacgtgaaaagcatgtccctgaagcaggcgctcaac
gcccgtaacgcgctcgccaagcacatttacgcccgcctgttcgactggatcgtggagcat
gtcaacaaggcgctgcacacctctttcaagcagcactccttcatcggggtcctggacatc
tacgggttcgagacgttcgaggtgaacagctttgaacagttctgcatcaactacgccaac
gaaaagctgcagcagcagttcaactcgcacgtcttcaagctggaacaggaggagtacatg
aaggagctgatcccctggacgctcatcgacttctacgacaaccagccctgcatcgacctg
atcgaagcgcgactcggagtcctggacctcctggatgaggagtgtaaagtgccaaaggga
acagataagaactgggcagagaagctctacaagcagaactccagcagcgcgcacttccag
aaaccccggatgtccaatacgtctttcatcatcatccacttcgctgacaaggtggaatat
cagtgcgaaggctttctggagaagaacagagacaccgtctacgaagagcagatcaacatc
ttgaaggccagccagtttcagatggttgcagatctgtttcatgagcagggcgacgctccc
gtcgccaagtcctccagagtgaacgtccgagcggccaagactgtccccaaatatcccaac
aaggagcacaggaagacggtgggccaccagttccgctcgtctctgcacctcctcatggag
accctgaatgccacgtctcctcactacgtccgctgcattaagcccaacgacgaaaaggag
tgcttctcgtttgactctcggcgagccgtgcagcagctccgagcctgcggagtgctggag
accatccggatcagcgcagccgggtatccgtccaggtggacataccaggacttcttcagc
aggtatcgagtcctgatgaagaagtcggacatgacggcgacggataagaaaccggtgtgc
agaaacctactggagacgctgataaaggaaccggacatgttccagtttggaaagacgaag
atcttcttccgagccggtcaggtggcgtacctggagaagctgcgagccgacaggttccgc
tcggcctgcatcaagatccagaagacggtccggggctggctgcagaagctccggtaccgg
aggatccgcaagtcggccatcaccctgcagagatacggccgtggatacctggcgcgcagg
cacgcagagttcctccgtctgagccgggccgccctcatctgccagaaacagtaccgcatg
gtgagagaacgacgagcctatcagagagtgagatgggccgtcgtcaccatccaggcctac
acccgagggatgtacacccgcaggatctactgggagttcatgctgcaccacaaggccatg
atcatccagaagaacgtacgcggctggctgcagaggaggaagttcatccgagcgcgcaac
gccgccatcaccatccagtgcgccttcagacggatgcacgccaagcggcagctgaagcag
ctgaagatcgaagcacgctcagcacaacatctgaaaaacctcaactcgggcatggagaac
aagatcgtacagctgcagaggaagatggatgaccagtccaaagagttacgaacgcagaac
aatcagctgctgtcaaccaacaccacgctgggctcggagctgacccggctgcagaagcag
ctggagcaggtccacagccagccgggcgataccggccgcgtggtgtcgctgcaggaggag
gtggagaggctgcgagaggagctgcaggaggcgcacaatcacaggaggaagctggaggag
gagcacggtagtgagaagctggagctcacacagagggtggaggacctgcagagagagaac
tcccagctgaaggccgagaaggaggagattaaccaacagatcctgcaggactccaggagt
tctgaagaggagacaagcagggcgtcgctgcagttggagttggacgcggagcgcgagcgc
taccagaacctcctgaaggagttcggccggctcgagcagcgctttgacaacctgaaggag
gaggtgtctctgaacaagttccatcccggccacaggaggactacgtccaaccagagcagc
ctggagtcagactccaactacccgtctatctccacctctgaggtgggagacaccgaggat
tccattcagctggtggacgagatgggcgtggagaaggcagcgatggacatcagtctgttc
atgaagctgcagaagagggtccgagagctggagcaggagaggaagaagctgcaggtcaac
ctggacaaaatggaagagctggccaagcacaagggctcggagccgaggagtccctcttct
gatcaggagatggcagatctggcctacaacaacctcaagagacaggagctggaatcagaa
aacaagaagctgaagaatgacctgaatgagctgaggaagaccattggtgatcacgcatcg
cagaacaactcgtccaatcagctgcaggacagttataacctgctggtcagtcagctgaag
gcagccaatgaggaaatggatgcccgcaaggaggaggtccttatcctgagaactcagata
ctgagcaacgctgagctgcatgagaggagcaagcaaatgcaggaaactgagaaggaagct
gaactgaacagcaaggagccgctggacaaagaagaggctctccaagcttatcacagactc
tccgagtccaaaaggctgctggaggcccagctgcagacccagtccaggcagaaccaggac
gagctggaggccctgcacacccagattgagcttctcaaggccgatatagagagcaagcag
gagatgctgaactacacccagtctctgtccccggaggcaaaggtggagtacagcgtccag
ctggagatcacacgcctcaccaacaaaaacctggacctcaaggagctggtggagaagctg
gagaagaatgagcggaagctgaaaaagcagctgaggatctacatgaagaaggtccaagag
ctggaagcatctgctgctcagagcagctcctccaaaccggagctgacccaccaggtgacg
gtgcagaggaaggagaaggactttgaaggaatgctggagtacagcaaggaggtggaagga
cgcctcatccaaactctggtcaaagacatcaggcccagcatggtgtcggccaccgtcccc
tgtctgccggcgtacatcctcctaatgtgcatccgccacactgactacgtcaatgacgac
cagaagttgagttctctgctcacctccaccatcaacgccatcaagaaggtcctaaagaag
aacaacgactttgagatgatgtcgttctggctggccaacaccagccggttgctgcactgc
ctgaagcagtacagcggggaggagtccttcatgacccggaacaccgacaagcagaatgaa
cactgtctgaagaactttgacctgactgagtaccgccaggtgctgtccgacctgtccatc
cagatctaccagcagctcgtcaaagtggccgagggaatcatccagcccatgatcgtgtcg
gcgatgttggagagcgagagcatcccgagcctggcgggcatgaagccgatgggctaccga
aaccgctcgtccagcatggacacggacgccgacggccccaccagctacaccctgcaggcg
ctgatccgacagctgggacagtttcacagcatcatgcaggaccacggcctggaccccgag
atcacgggccaggtggtccggcagctcttcagctgcatcaacgcccacaccctcaacaac
ctgctcctgcgcaaagatgtctgctcctggagcaccggcatgcagctcaggtacaacacc
agtcagatggaagagtggctcagagcaaacaatctgtatcagagcaacgccgccgagact
ctggagcccatcatccaggccgctcagctgctgcaggtcaagaagaagacgtcccaggac
gctgaggccatctgctcgctgtgcacggctctcaccatgcagcagattgtgaagatcatg
aacctctacacccctctgaacgactttgaagagcgagtcaccgtgtccttcatcagaaac
atccagacatgcctgcaggacaggaccgagcgtcctcagctcctggtggacaccaagcac
gtcttccccgtccacttcccgtactccccgtcggccctgaccctggacacgctgcacatc
cccgcctccctcggcctcgacttcctcaccagggtgtga
DBGET
integrated database retrieval system
