Cololabis saira (Pacific saury): 133455514
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Entry
133455514 CDS
T09849
Symbol
ythdc1
Name
(RefSeq) YTH domain-containing protein 1 isoform X1
KO
K20100
YTH domain-containing protein 1
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133455514 (ythdc1)
Spliceosome [BR:
csai03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133455514 (ythdc1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
PI3K_1B_p101
Motif
Other DBs
NCBI-GeneID:
133455514
NCBI-ProteinID:
XP_061590575
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All DBs
Position
11:44885803..44910295
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AA seq
701 aa
AA seq
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MAAERREDKDGELNVLEDLLTEAPDQDDELYNPETERELTDKKGTKRKSERSDSQDLKRI
RSSGHAPSRSSSSSNKRGLGSSLSSSKKVSSPRGRHTASYRHDYYEERKGRRGPREGPRE
GPREGPREGPREGPREGPRSRAGDDGRRRDSHRGLESLSQKLRHDERRESPAPHDEDNQS
EEEVAAEYGSDQVSGSSSPAASHVGEEEEEQEEEDEEEEGMEDEEEEEEEEEEGEKEDDE
EEEEEEEYDERRGGADGNDYDTRSEAGDSCSSSVSFSDEGGSAHSGSGSEASGSGKKREK
LSSSVRAVRKGMENPTTKLRYILRDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNA
AFRAARSVILVFSVRESGKFQGFARLASESHHGGSPIHWVLPAGMNAKMLGGVFKIDWLC
RRELPFIKTAHLSNPWNEHKPVKIGRDGQEIQPDIGAQLCALFPLDESVDIHQVARRIRH
KRRTPSEPRPRGRPPQREPGRRRPEEYDIHGRKRPRTDGLPDFSQRTGFIQDLRNQPMDR
RFSSVRRDVFLNGSYNDYMRDYHHSVGPPAPWQTLAAYPGVEQQPPHHPPYYHHSHPPPP
PHQAYHHHHHPALPPHDAPPPRFRDKQRVPQHRTFTSSPHDYDMRVDDFLRRTQAVVSSR
RERERQRERERGGPRRDRERERPRDRERERERDKERGRYRR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgagcggcgcgaggacaaagatggtgagctcaatgttctggaggatttgttg
accgaagctcccgatcaagacgatgaactctacaaccccgagacggagcgtgaactcact
gacaagaaaggaaccaagaggaagagtgagcgctctgacagccaggacctgaagaggatc
cgctcctcgggccacgccccctccagatcctcctcctcctccaacaagagaggcttgggc
tcgtccctgtcttcctccaagaaggtgtccagcccccgcggccgccacactgccagctac
cgtcacgactactatgaagagcgaaaggggcgtcgagggccccgagaggggcccagagaa
gggcccagagaagggcccagagaggggccccgagaggggcccagagaggggccccggagc
cgcgctggagatgatggccgccgccgagattcgcacaggggcctggagagcttgagtcag
aagctgcggcatgatgagcggcgggaaagccccgccccccatgatgaagacaaccagtca
gaggaggaggtggcagcagagtacggctctgaccaggtctcaggcagctcctctcctgcc
gcttcccatgtaggagaggaagaggaggagcaggaggaggaagatgaagaggaagagggc
atggaggacgaggaggaggaagaggaagaagaggaggaaggagagaaggaggatgacgag
gaagaggaggaggaagaggaatacgatgagcgtcggggcggcgccgatgggaacgactat
gacactcgcagcgaggccggcgactcctgctcctcctccgtcagcttctcagatgaaggc
gggtcagcacactcgggctctgggtccgaggcctcaggatcggggaaaaagcgtgagaag
ctgtcatcgtccgttcgagctgttcgtaaagggatggaaaaccccaccaccaaactgcgt
tatatcctgcgggatgcgcggttctttctcatcaagagcaacaaccacgagaacgtttcc
ctggccaaagcaaagggcgtttggtcgacgctaccggtcaacgagaagaagctgaacgcg
gcgttccgcgctgctcggagcgtcatcctggttttctccgtgagggagagcgggaagttc
caaggttttgctcgtttggcgtcagagtctcatcacggcggttctccgatccactgggtt
cttccagctggcatgaacgcaaagatgctgggaggagtgttcaagatcgactggctgtgc
aggcgggagcttcctttcatcaagacagcgcacctgtccaacccctggaatgaacacaag
cctgtcaagattggccgtgacggacaggagatccagcccgacatcggtgcgcagctttgt
gccctgttccccctggatgagagcgtggatattcaccaggtggctcgccgcattcgtcac
aagcgtcggaccccatcggaacctcggcctagaggccgaccgcctcagcgtgaaccggga
aggcgtcgccctgaggagtacgacatccacggcaggaagcgaccacgaaccgatggtctg
ccggacttcagtcagagaacagggttcatccaggacctacggaatcaaccaatggacagg
agattctccagcgtcagaagggacgtgttcctcaacgggtcatacaacgactacatgagg
gactaccaccacagcgtcgggcccccggctccctggcagactctggcagcgtaccctgga
gtggagcagcagcctccccaccaccccccctactaccaccacagccaccccccgcccccg
ccacaccaggcctaccaccaccatcaccaccccgctctgccacctcacgacgctcctccc
ccccgcttcagagacaagcagcgtgtgccgcagcaccgcaccttcacgtccagcccgcat
gactacgacatgcgtgtggacgacttcctccggcgaacgcaggcggtggtgagcagcagg
cgcgagcgtgagcggcagcgggagcgcgagcgaggcggaccacgccgcgaccgagagcgc
gagcgaccaagggaccgggagagggagagagagagggacaaggagagggggcggtaccga
cggtga
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