Cololabis saira (Pacific saury): 133456251
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Entry
133456251 CDS
T09849
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133456251 (apex2)
Enzymes [BR:
csai01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
133456251 (apex2)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
133456251 (apex2)
BRITE hierarchy
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GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
133456251
NCBI-ProteinID:
XP_061590687
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Position
12:5182903..5187336
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AA seq
572 aa
AA seq
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MKIVTWNINGIRTFKGGIKSALDSLGADIVCVQETKVTRDLLDERTAIVDGYNSYFSYSR
GRSGYSGVATYCRDSSTPFAAEEGLSGLLTNHEGAVGCYGDLSEFSNEELQLLDNEGRAV
ITQHKIMCQGEEKTVTVINVYCPRADPEKPERKQFKLHFYKLLQSRAETILKEGSHVIVL
GDVNTSHRPIDHCDPSDIDDFGENPGRKWLNSFLHSSEQEDDHSEKQSDEEFELLNPNQK
GKFVDTFRYFHPTRHNAFTCWSTLTGARQTNYGTRIDYIFGDRQLAKEQFVAADIMPEME
GSDHCPVWGKLSCSVLPCSKPPPLCTRYLPEFAGKQQKLSRFLVKVDQKSVQPAQMKVLP
GSQEEEERRENLNPFGAEKKTLAPNGKKRLTSDFSAPKGKKTKTVNSSLKPQGNLLSFFK
PKVGNVKQCDKALEEVTSSHSVPKVSPNSDLGSVGALKAEGTEVIYPGSSQLCTSSTTVE
MDNLVQTKHLTPRGNGGHSEVKNGASVFWKSVLQGPPRPPRCKAHGEPCVLRTVKKEGPN
MGKQFFVCCRPQGHPSNPEARCNFFHWVEKEK
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcgtcacctggaatataaacggcatcaggactttcaaaggcggcataaaaagc
gctctcgactcgctgggcgcagacattgtctgtgttcaagagacgaaggtgacaagagat
ctgctggacgaaaggactgcgattgttgacggatacaattcatatttcagctacagccgg
ggacgcagcggctattcaggtgttgccacctactgtagggacagctccaccccgtttgct
gcagaggagggtctctcaggtctgctgaccaaccatgaaggggctgtcggttgctacgga
gacctctctgagttttcaaatgaagagctgcagcttttggacaatgaagggcgagcagtc
atcacacaacacaaaatcatgtgtcagggcgaagagaaaaccgttactgtaattaatgta
tactgtccacgggctgaccctgaaaagccagagagaaagcagttcaaacttcacttctac
aagctccttcagagtagggcggaaactatactgaaagaggggagccatgtgattgtttta
ggagatgtgaacacgtctcatcggccaatagaccactgtgaccccagtgacattgatgat
tttggtgaaaaccctgggaggaaatggctgaacagttttttgcacagcagtgaacaagaa
gacgaccacagtgaaaagcaatctgatgaagaatttgagcttttgaatcccaaccaaaaa
ggaaaatttgtagatacctttcggtatttccacccgacccgtcacaacgccttcacgtgc
tggtcaactctcactggggcacggcagaccaactatggcacacgcatcgactatatcttt
ggggaccgccagctggccaaggagcagtttgtggcggccgacatcatgccggagatggag
ggctcggaccactgtcctgtgtgggggaaactgagctgctctgttcttccttgctccaag
cccccgcctctctgtactcgctacctgccagagtttgctggcaaacagcagaagctctct
cgcttccttgttaaggtggaccaaaaatcagttcagccggcccagatgaaagtcttaccc
ggatctcaagaagaggaggaaagacgggagaatttaaacccgtttggagctgaaaaaaaa
accttggctccaaacggcaagaaacgtttaacatcagacttttctgccccaaaggggaaa
aagacaaagacagtaaacagctctttaaagcctcaaggcaacctcctttccttctttaaa
ccaaaagtcggaaatgttaagcagtgtgacaaagcgctagaggaagttacctcatcacac
agtgttccaaaagtatctccaaatagtgacttgggttcagtcggtgccttaaaagctgaa
ggtactgaggtgatttatcccggttcatcccagttgtgcaccagtagcaccacagtggaa
atggacaacctggttcagacaaaacacttgacccctcgggggaacgggggacactcggag
gtcaagaacggggcatcagtgttttggaagtcggtgcttcagggtcccccccggcccccc
cgctgtaaggcccacggagagccctgcgtgcttcgtactgtaaaaaaagagggtccgaat
atggggaagcagttctttgtatgttgccgtcctcagggacatccttccaaccctgaggcg
cgatgcaatttctttcattgggttgagaaggaaaagtga
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