Cololabis saira (Pacific saury): 133456337
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Entry
133456337 CDS
T09849
Symbol
mbd4
Name
(RefSeq) methyl-CpG-binding domain protein 4
KO
K10801
methyl-CpG-binding domain protein 4 [EC:3.2.2.-]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
133456337 (mbd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133456337 (mbd4)
03400 DNA repair and recombination proteins [BR:
csai03400
]
133456337 (mbd4)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
133456337 (mbd4)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
133456337 (mbd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
133456337
NCBI-ProteinID:
XP_061590798
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All DBs
Position
12:complement(18950653..18956538)
Genome browser
AA seq
470 aa
AA seq
DB search
MENSAGMNDQSHESLMPSGWIKVVRQRKGGKTAGKLDVYIISPKGQRFRSKASLQAFLLE
SVEWNLDINLFDFTASKDNVTTSETHPLNAKPRRRRKKQPDGQQEKSDKKMDSIPSKSKK
SSSFLSSDIKDRKVRTPEDTNSINSKIQVESVADIEVCEDKNEEIVKDCSQTASLGLVDD
VNVQKSPQKVGQLREKLFRLAPSSNQQNTLLFHNNTQTDLQLSVPSLTVEAATGSETEGE
KASDTDITQFHCKGENKSNSDVEADADSHQDVEEEVLLPDITSGSCTPMSGSQNKSKSLE
TKRKTSPYFSRKPLGDGISPPRRKAFKKWTPPRSPFNLVQETLFHDPWKLLVATIFLNKT
SGKMAIPVLWQFFERYPSAQMTREADWKPMSELIKPLGLYELRAKTLIRFSDEYLSKQWR
YPIELHGIGKYGNDSYRIFCVEEWRQVTPEDHMLNKYHAWLCETQETSGI
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggagaacagtgcgggtatgaatgaccaaagtcatgaatccctaatgccatcagggtgg
attaaagtggttaggcagcgaaaaggaggcaagacagcagggaaactggatgtctacata
ataagtcccaaagggcagaggttccggtcaaaagcgtccctccaagctttccttttagaa
agtgttgaatggaacttggacataaacctatttgatttcaccgcatccaaagataatgtc
actacctcggaaacacatcctttaaatgcaaagcccaggagacgaaggaaaaagcaacca
gatggacagcaggagaaaagcgataaaaagatggattccattccaagtaaatctaaaaaa
tcctcttccttcctcagcagtgatattaaagacagaaaagtaaggactccagaagatact
aactctattaacagcaaaattcaagttgagagtgttgcagacatagaggtttgtgaagac
aaaaatgaggagattgtgaaggattgctcacaaactgcatcattaggattagtggatgat
gtgaacgtgcagaagagccctcagaaagtcgggcagctgagagagaagctcttcagactg
gccccttccagtaatcagcagaacactttactttttcacaacaatacacagacagacttg
cagctttcagtccccagtctgactgttgaagctgcaactgggagtgaaacagaaggtgag
aaagcatcagacacagatatcacacagtttcactgcaaaggtgagaacaagtctaattct
gatgtggaggctgatgctgacagtcaccaggatgttgaagaggaggtgttgttacctgac
atcacaagtgggagctgcacaccaatgtcgggttcccagaataagtccaagagcttggaa
actaagcggaaaaccagcccttatttcagcagaaaaccccttggagatggaattagccca
cctaggaggaaagccttcaagaaatggacacctccccgctctcccttcaacctcgttcag
gagacccttttccatgacccttggaagctcctggttgccactatttttttgaacaagaca
agtgggaagatggccattccagtgctgtggcagttctttgagcgttacccatctgcacag
atgacccgggaagcagactggaagcccatgtctgaacttataaagccactcggtctgtac
gagcttcgagccaaaacacttatccgcttctcagatgagtatctatcgaaacagtggcgc
taccctatcgagctgcacggtatcggaaaatacggcaacgactcctacaggatcttctgt
gttgaagagtggagacaggtgacgcctgaagatcacatgttaaataaatatcatgcctgg
ctctgtgagacccaggaaacatcgggaatatga
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