Cololabis saira (Pacific saury): 133456343
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Entry
133456343 CDS
T09849
Symbol
fmodb
Name
(RefSeq) fibromodulin
KO
K08121
fibromodulin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133456343 (fmodb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
csai00535
]
133456343 (fmodb)
Proteoglycans [BR:
csai00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
133456343 (fmodb)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRRNT
LRR_9
LRR_6
LRR_LRWD1
DUF6483
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
133456343
NCBI-ProteinID:
XP_061590805
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All DBs
Position
12:19303111..19309513
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AA seq
345 aa
AA seq
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MLAVVFLLVMGMVDVSTSQRFSPFQRLSHLRGRWQNAGWYSEDIDCPLECDCPAAYPMAM
YCQSRSLQHVPYIPSHIKYVYLQNNQITGIQDGVFNNATNLLWLIMSHNKLKSDQISKNV
FSKLEKLEQLYLDHNELSHMPQNLPVSITNLRLGHNKISKISSNSFEGMVNLTTLQLLAN
IIEDTPDVFKGLKSMTLLDMRKNKLKQIPVNLPEDLQQLYLEFNDIESVPPGFLTMNPKL
QFVRLSHNKLTDKGLPASVFNISTLVELDLSFNKLEKIPAVSTNLQNLYLQANKIKEFSL
SSFCSTTDMTNFSMLKMLRLEANEISASEIPAEAAYCLRRAFVDV
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgttggcagtggtgttcctgcttgtgatgggtatggtggatgtgagcaccagccagcgt
ttcagtccattccagcggctgtcccatttaagagggcgatggcagaatgccggctggtat
tccgaggacatagattgccccctggagtgtgattgcccagcagcctaccccatggctatg
tactgtcagagtcgcagccttcagcatgttccttatatcccatcacatatcaaatatgtc
tacctgcagaataaccagatcacaggcatccaggatggtgtgtttaacaatgctaccaac
ctgctctggttgattatgtctcacaacaagctcaagtcagaccagatcagcaagaatgtc
ttcagcaaattagaaaaattggaacagctctacctggaccataatgagctgagccatatg
cctcagaacttgcccgtatctatcacaaacttgcggcttggtcataataagatctcaaaa
atctcctccaactcgtttgaaggaatggtcaaccttaccaccctacaactcctagcaaat
atcatagaggacacaccagatgtatttaagggactgaagtccatgaccctgctggatatg
aggaagaacaagctcaaacaaatccctgtcaacctcccagaggacctgcagcagctttac
ctggagtttaatgacattgaaagtgtgccaccaggctttctcaccatgaatcccaaactg
caatttgtccggttgtctcataacaagctgactgacaaaggacttcctgccagtgtcttc
aatatcagcacacttgttgaacttgacctgtcttttaataaactggagaagatccctgct
gttagcacgaatctgcagaacctgtacttgcaagccaataagatcaaagagttctccctg
agcagtttctgcagtacaactgacatgacaaacttctcaatgctaaaaatgctgcgtttg
gaggccaatgagatcagcgccagtgagattcctgctgaagctgcctactgtttgaggcgt
gcctttgtggacgtgtag
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