Cololabis saira (Pacific saury): 133456606
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Entry
133456606 CDS
T09849
Name
(RefSeq) tubulin alpha-1B chain-like
KO
K07374
tubulin alpha
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04145
Phagosome
csai04210
Apoptosis
csai04517
IgSF CAM signaling
csai04530
Tight junction
csai04540
Gap junction
csai04814
Motor proteins
csai05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133456606
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133456606
09143 Cell growth and death
04210 Apoptosis
133456606
09144 Cellular community - eukaryotes
04530 Tight junction
133456606
04540 Gap junction
133456606
09142 Cell motility
04814 Motor proteins
133456606
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133456606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133456606
03036 Chromosome and associated proteins [BR:
csai03036
]
133456606
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133456606
04147 Exosome [BR:
csai04147
]
133456606
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133456606
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
133456606
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
133456606
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133456606
Exosomal proteins of other body fluids (saliva and urine)
133456606
Exosomal proteins of colorectal cancer cells
133456606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
133456606
NCBI-ProteinID:
XP_061591088
LinkDB
All DBs
Position
2:complement(40073444..>40075618)
Genome browser
AA seq
453 aa
AA seq
DB search
NSQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQTRSDKTVGGGDDSFNTFFSETGA
GKHVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLV
LDRIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVS
TAVVEPYNAVLTTHTTLEHSDCSFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSI
TASLRFAGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEP
ANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQ
PPTVVPGGDLAKVQRALCMLSNTTAIAEAWGRLDHKFDLMYAKRAFVHWYVGEGMEEGEF
SEAREDMAALEKDYEEVGVDSVDDGGEEEAGEY
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
aattcccagcgtgagtgtatctcagtgcacgtgggccaggccggtgttcagattggaaat
gcatgctgggagctttactgcctggagcacggcatccagccggacggacagacccgaagt
gacaagacagtcggcggaggagacgactccttcaacaccttcttcagtgaaacaggagct
ggaaaacacgtgccgagagccgtctttgtggacctggagcccaccgtcatcgatgaggtg
cggtcggggacctaccgtcagctgttccaccccgagcagctgatcactggcaaggaggat
gctgccaacaactacgcccgcggacactacaccatcgggaaagaaatcatagacctggtt
ctggaccggatccggaaactggcggaccagtgcaccggcctgcagggcttcctggtgttc
cacagcttcggcgggggcaccggctctggtttcacctccctgctgatggagcgtctgtcc
gtggactacggcaagaagtccaagctggagttctccatctacccggccccccaggtgtcc
acggcggtggtggagccgtacaacgccgtcctgaccacccacaccaccctggagcactcc
gactgctccttcatggtggacaacgaggccatctacgacatctgccgcaggaacctggac
atcgagcgtcccacctacaccaacctgaaccggctcatcagtcagatcgtgtcctccatc
accgcctccctccgcttcgccggcgccctcaacgtggatctgacggagttccagaccaac
ctggtgccgtatccccggatccacttccctctggccacctacgcccccgtcatctcggcg
gagaaggcctaccacgagcagctgaccgtagctgagatcaccaacgcctgcttcgagccg
gccaaccagatggtgaagtgcgaccctcgccacggcaagtacatggcctgctgcctgctg
taccgcggagacgtggtgcccaaagacgtcaacgccgccatagcaaccatcaaaaccaag
cgcagcatccagttcgtggactggtgccccaccggcttcaaggtgggcataaactaccag
ccccccaccgtggttcccgggggagacctggccaaggtgcagagggctttgtgcatgctg
agcaacaccaccgccatcgccgaggcctggggccgcctggaccacaagtttgacctgatg
tacgccaagcgggccttcgtccactggtacgtgggggaggggatggaggagggggagttc
tccgaggcccgggaggacatggcggctctggagaaggattacgaggaggtgggagttgac
agcgttgatgatggaggagaggaagaggcaggggaatattaa
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