KEGG   Cololabis saira (Pacific saury): 133456697
Entry
133456697         CDS       T09849                                 
Symbol
kdm5c
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
csai  Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:csai00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:csai01009]
    133456697 (kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:csai03036]
    133456697 (kdm5c)
Enzymes [BR:csai01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     133456697 (kdm5c)
Protein phosphatases and associated proteins [BR:csai01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     133456697 (kdm5c)
Chromosome and associated proteins [BR:csai03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    133456697 (kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID JmjN zf-C5HC2 PHD DUF7793
Other DBs
NCBI-GeneID: 133456697
NCBI-ProteinID: XP_061591218
LinkDB
Position
12:complement(5423968..5453110)
AA seq 1590 aa
MEGEEFIPPPECPVFEPTWEEFQDPLGYIAKIRPIAEKSGICKIRPPPDWQPPFSVELDN
FHFTPRIQRLNELEAETRVKLNYLDRIARFWEIQGSSLKIPHIERRIVDLFSLSKVVTDE
GGFEMVCKERRWARVAQRLGYPPGKNIGSLLRSHYERIVYPFEMFQSGASLPSCKPKHYD
GEEVDKEYKPHSIPLRQSVQPSKMSSYGRRANRCQPDGPEDLAPHPLTTGSQLISAPEPT
EEDIEKNPELKKLQIYGAGPKMMGLGLVARDKGIRKKDELPQTVTVKESVSPAPVDTAVK
SEPLEPEEKPSDESPSSLQPPPQSITVKTEVKKEEHEENGKGNDRKREDANGPCTKMTMR
LRRNLNNPQCVDSFVCRMCGRGDDDEKLLLCDGCDDNYHTYCLLPPLTDPPKGNWRCPKC
VAEECKKPSEAFGFEQATREYTLQSFGEMADAFKADYFNMPVHMVPTELVEREFWRLVSS
IEEDVTVEYGADIHSKEFGSGFPMNTGKRVLTKEEEEYARSGWNLNVMPVLEQSLLCHIN
GDISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSVAAERLEDVMKK
LTPELFEYQPDLLHQLVTIMNPNILMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNF
AEAVNFCTADWLPAGRSCIEHYRRLRRYCVFSHEELTCKMAASPEKLDLNLAAATHREMF
IIVQEERKLRKSLMERGITEAEREAFELLPDDERQCDKCKTTCFLSALACSNCPESLVCL
YHTQDLCNCPTEKLYLRYRYTLDELLAMLHRLKVRSESFDFWANRVKEALEQEDGNKIEI
EDLEKLKAEAAEKKFPDNELLRKLNTVLKDIESCKKTSAELLTNSKNSESKMTFAELKSL
VEKMQRLPCEGNRLEEVQAVLLTVEDFQKEAQALVNNRDWRKDSLPPEQLQTLLEQGDNL
PVVVPECELLQGLKEQGHWLAKVRRTLGTEEEERQEVTLDVLRNLMEAGCNVPQSVSVET
AMAELQELLTIAERWEEKAQICLEQRQKHPLSTLEAIVNEAQLIPVTLPNILALQDCLTR
ARAWVTDLEEIQNGEHYPCLDDLEGLVAIGRDLPVYMEELRQLELQVASAHSWRDKASKT
FLKKSSQHSLLEVLCPCAKRREKRSHTEPLDEPLEDSDTNTLGLSAQALRDPAAIVMAFK
EGEHQEKEALLRLQKSNMCKSGLGPAVAKENGWDDTMDTRTSSHPENSVQGNGDHSRTAF
PQAMCVCDGQPRAPQLRCHLCKDWFHGGCVSFPSVLPPTGPNLWTNLFCWWDWDSRFLCP
QCQRSRRPRLETILALLVALQRLPVRLPEGEALQCLTERAITWQGRAKEALETPELQRAL
QRLQKLKDTLRYDPEKEEDKKKETEGNSVIVLSDSEGGEGEDGVIDLTEDSSPKKKTKES
NNLQARWENGIGKKSNITGVGSLLPLLPSLRGRVVELPPATRLQLEELQLEGDLLEVSLD
QTSTIHRVLEAASDPPTETLHTLIQIELDEQRRTNRGRPKDPKRKRKGHRSGSREGPGEK
SLDVSKSKKTCPVKHSPSPQPPVQSYPESL
NT seq 4773 nt   +upstreamnt  +downstreamnt
atggaaggggaagagtttattcctcctccggagtgtcccgtttttgagccaacatgggag
gagtttcaagatccgttgggctatatcgcaaagatacgtccgattgcagagaagtctgga
atctgtaaaattcgacctccaccggactggcagccaccattttctgtggagctggataac
ttccacttcacacctcgcatccagagacttaatgagttagaggctgagaccagagtgaag
ctcaattatttggaccgtattgccagattttgggagattcagggatcctctttaaaaatc
ccacacattgaaaggcgcattgtggatctcttcagcctgtcaaaagtggtgacagatgaa
ggaggttttgagatggtgtgtaaggagcggcggtgggctcgtgtagcccagcggctcggc
taccctccaggcaaaaacattggctctctgctgcgctcccactatgagaggatcgtctac
ccatttgaaatgtttcagtctggcgccagtcttccgtcttgcaagccaaagcactatgat
ggtgaagaagtggataaagaatataagcctcactccatcccactgcgacagtctgtgcag
ccatccaaaatgagcagttatggacgccgagcaaaccggtgccagcctgacggtccagag
gatctggccccccatcctctcacaactggctctcaactcatctctgcgcccgaacctaca
gaggaagacatagagaagaaccccgagctgaagaagttacagatctacggtgcagggcct
aagatgatgggactgggactagtggcaagagacaaaggcataaggaagaaagatgagttg
cctcaaacagttactgtcaaggagagtgtgtctcctgctcccgttgacactgcagtcaag
tctgagccactggagcctgaagaaaagccaagtgatgagagcccatccagcctccaacct
cctccccagagcatcaccgttaagacagaagtgaagaaagaagaacatgaggagaatgga
aaaggaaatgatcggaaaagggaggatgcaaatggaccttgcactaaaatgaccatgagg
ttaagacgcaacctcaacaacccacaatgtgtggattcttttgtttgtcggatgtgtgga
cggggagatgatgatgagaaactcctcctgtgtgatggctgcgatgacaactatcacaca
tactgcctgctgcctccactcactgatccgcccaaaggcaactggcgatgcccgaagtgt
gtcgctgaagaatgcaagaaaccttcagaagcatttggctttgaacaagcaacaagagag
tacactctgcaaagttttggggaaatggcagatgctttcaaagcagattattttaacatg
cctgtccatatggttcccactgagctcgtggagagagagttctggagattagtcagtagt
attgaagaagacgtgactgttgagtatggagcagacatacactccaaagaatttggcagc
ggtttcccaatgaacactggcaaaagggtcctcaccaaagaagaagaggaatatgcccgc
tctggctggaacctgaatgtgatgccagtgttggagcagtcactgctgtgccatattaat
ggagacatctctgggatgaaggtgccatggctttatgttggcatggtgttctcagccttc
tgctggcacatcgaggatcactggagctactccatcaactacctgcactggggtgaaccc
aaaacttggtatggggttccctctgtggcagctgagcgacttgaggacgttatgaagaag
ctgacaccagagctctttgagtaccagcctgacctcctgcatcagctcgtcaccatcatg
aaccccaacatcctcatgtctcacggtgtcccggttgttcgcaccaaccagtgtgctggt
gagtttgtcatcaccttccccagagcctaccacagtggcttcaatcagggttataacttc
gctgaggcggtcaacttctgcacggcagactggcttcctgctggtcgttcctgtattgaa
cactaccggcgtctgaggaggtattgcgtcttttctcatgaagaactcacctgtaaaatg
gcagctagcccagagaaactggacctgaacctggctgcagccacacaccgggagatgttc
atcatcgttcaagaggagaggaagctccgcaagagtctgatggaaaggggcattacagaa
gcagagcgggaggcttttgaactgctgcctgatgacgagagacagtgtgataaatgtaag
accacatgcttcctctctgctctggcatgttcaaactgtccagaaagtctggtgtgtctc
tatcacactcaggatctgtgcaactgccccactgaaaaactctacctcaggtacagatac
accttggatgagttgttagcaatgttgcatcgattgaaagtccgttccgagtcctttgat
ttctgggcaaacagagtaaaagaggcacttgagcaggaggacggaaacaagatagaaatt
gaagacctggaaaaactgaaggccgaggcagcggaaaagaaatttcctgacaatgaactt
ctcaggaaactcaacactgtccttaaagacatagaatcttgtaaaaagacaagtgctgag
ctccttaccaattcaaagaacagcgaaagcaagatgacgtttgcagagctgaaatccttg
gtggagaaaatgcagcgtctgccctgtgaagggaaccggctggaggaagtgcaggcggtt
ctgctgacggtggaggatttccagaaagaggctcaagccctggtcaacaacagggactgg
aggaaggactcgctgccacctgagcagttgcagacgttgttggagcagggggacaacttg
cctgtcgtggtcccagagtgtgagttactccagggcctgaaggagcagggccattggttg
gcaaaggtgaggcgcaccctgggcacggaagaggaggagaggcaggaagtgaccctggac
gtgttgaggaacctgatggaagcaggttgcaatgtgccccagagtgtgtctgtggagacg
gctatggccgagctccaggaactgctcacaattgctgaacgctgggaggagaaagctcag
atctgcctagagcaaaggcagaagcatcctctttccaccctggaggcaattgtaaatgag
gctcaacttatcccagtgacactccccaacatcctggccctgcaggactgtctaacacgt
gctcgggcctgggtgacagacttggaggaaatccagaatggggagcattacccgtgtctg
gacgacctggagggcctggtcgctattggacgggacctgccggtctacatggaggagctg
aggcagctggagctgcaggtggccagtgctcattcgtggagggacaaggccagcaagacc
ttcctgaagaagagcagtcagcacagcctcttagaggttttatgtccatgtgctaaaagg
cgggagaagcggagccatacagagcctttggacgagcccttagaggattctgataccaac
actctgggcctttctgctcaggctttaagggatcccgcagctattgtaatggctttcaaa
gaaggggagcaccaggagaaggaggcgcttctgaggttacagaaaagtaacatgtgtaaa
tctggactcggccctgcagttgctaaagagaacgggtgggacgacaccatggacacgcgt
acgtccagccatcccgagaactctgtccagggtaacggcgaccacagccgcaccgccttc
cctcaggcgatgtgcgtgtgcgacgggcagccccgtgctcctcagctccgctgccatctc
tgcaaggactggttccacgggggctgcgtctccttcccctccgtgctacctcctactgga
cccaacctctggacgaaccttttttgctggtgggactgggactcgcgcttcttgtgtccc
cagtgccagcggtcgcggcggccacgtctggagactattctggcgttgcttgtagccctg
cagagactgcccgtgcgtctgcctgaaggagaagcgctgcagtgtctcacagagagggcc
atcacatggcagggccgagccaaggaggcgctagagacgcccgagctgcagcgcgcactt
cagaggctgcagaaactcaaagacactctccgctacgacccggaaaaagaggaagacaag
aaaaaggagactgaagggaattctgttattgttctgtcagactctgagggaggggaaggg
gaggatggagtcattgatttaacagaggactcttcacctaaaaagaaaacaaaggaaagc
aacaaccttcaggctcgatgggaaaatgggatcggcaagaaatcaaacatcacaggtgtg
ggctctctgctgccccttctgccctcgttgaggggccgggtggtggagctgcccccggcc
accaggctccagctggaggagctgcagctggagggagacctgctggaggtgtcactggac
cagaccagcaccatccaccgagtcctggaagctgcgtctgacccccccacagaaaccctg
cacacactcatccagattgagcttgacgagcagagacgcacgaatcgtggccgccccaag
gaccccaagcggaagagaaaaggccaccggagcgggagcagggaggggcccggagaaaag
tccctggacgtctccaagtcgaagaaaacgtgtcccgtcaagcacagcccctccccccag
ccgccagtccagagctatccagagagtttgtga

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