Cololabis saira (Pacific saury): 133456770
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Entry
133456770 CDS
T09849
Symbol
itga5
Name
(RefSeq) integrin alpha-5
KO
K06484
integrin alpha 5
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03266
Virion - Herpesvirus
csai04145
Phagosome
csai04510
Focal adhesion
csai04512
ECM-receptor interaction
csai04810
Regulation of actin cytoskeleton
csai04820
Cytoskeleton in muscle cells
csai05100
Bacterial invasion of epithelial cells
csai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03266 Virion - Herpesvirus
133456770 (itga5)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133456770 (itga5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133456770 (itga5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
133456770 (itga5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133456770 (itga5)
04810 Regulation of actin cytoskeleton
133456770 (itga5)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133456770 (itga5)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133456770 (itga5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csai04147
]
133456770 (itga5)
04515 Cell adhesion molecules [BR:
csai04515
]
133456770 (itga5)
04090 CD molecules [BR:
csai04090
]
133456770 (itga5)
Exosome [BR:
csai04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133456770 (itga5)
Cell adhesion molecules [BR:
csai04515
]
Integrins
Integrin alpha subunits
133456770 (itga5)
CD molecules [BR:
csai04090
]
Proteins
133456770 (itga5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_3
Integrin_A_Ig_2
Integrin_A_Ig_1
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-GeneID:
133456770
NCBI-ProteinID:
XP_061591325
LinkDB
All DBs
Position
12:7247241..7302147
Genome browser
AA seq
1059 aa
AA seq
DB search
MGLEGFCARTPGTESFFSRSFLCILGVLVSVCPPVSEGFNLDTENPAVYSGPNGSYFGYA
VDFYLSDSASASVVIGAPKANTSQVNITEGGSVFYCPWSLGQSDCHAIEFDADGDRIVLL
NDTEHQADFKSHQWFGATVRSHGDTILACAPLYSWRTKNDVPHSDVTGTCYLSVQNFTKF
VEYAPCRTEISDRGGQGYCQGGFSADFTKDGKVVLGGPGSYFWQGQLISAAKEDIVKAYY
PGYFMQAVEGQIQTKQAQVAHDDSYQGYSVAVGEFSGDEVEDFVAGVPKENMLYGLVSIL
NGADLTIMKSYSGEQMGSYFGYALATTDINNDGMTDLLVGAPMLMVKGSDGHLEEMGRVY
VYLQRGPLDLELLLPHLTGTQAYGRFGSTVAPLGDLNQDGFNDVAVSCPFGGEDRQGLVY
IYNGYSEGLREKPSQVIAGQWAAGAFPASFGFALRGAKDLDMNGYPDLIVGAFGVNKAVL
YRSRPIVNASGSLIVSPTMINPEEKNCEVTDGNSRLLVSCVNLSFCIFAEGKHLPDNLDF
QVEVQLDSQKHKQKGAVKRALFEDSQQPLLQKSVRVRHGERVCNHTKIYLRDEKDFRDKL
SPILVSLNFSLDPHAAADSHGLQPILNYQTANVIVQKAQILLDCGEDNICVPDLKLAVHS
NRKEVYLGDENALTLTFNARNEGEGGAYEAELHVVLPSEADYSGIARNNESFTQLTCSYE
TENQTRYLSCDLGNPMKAGTDLLAGLRFTVPRLKDTHKTVQFEFQIRSKNENNSHSEVVP
YKLEVVVQADVILQGVSRPDKVFFPPANWKVPKNYEAEQDVGPAMEHIYELVNNGPSQIS
HTFLELRCPLRAPAHTLLYPLEFSTEGPINCTANLTMNHLNLKLQRPSTESPILALKAPE
HHVVRRDVHKEQFAHLTNLSCSNVECWTLQCNVGLLGKGTTAILKVRSRIWAQTFTEKPY
KNHVLECLARYNVKKMPYAILPKVYPSGQKKVVTPVVWNKPDIENSVPLWIIILAILAGL
LLLALLIYVLYRFGFFKRSVPYGTAMEKAQLKPQAASEA
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgggtttggaaggattttgcgcacggacgccggggaccgaatccttcttcagccgctct
ttcctttgtattctcggggtcttggtcagtgtttgtccgcccgtgagtgagggtttcaac
ctggacacggagaacccggctgtttacagcggacctaacgggagctacttcggatacgcg
gtggacttttatttgtccgactctgccagtgccagtgtggtgatcggtgcccccaaggcc
aacacgagccaggtcaacatcacagagggagggtcggtcttctactgtccctggagcctc
ggacagtcagactgtcacgccattgagttcgatgcagatggggatcgcattgtcctcctc
aatgatacagaacatcaggccgatttcaagtcccaccagtggttcggcgctactgtccgc
tctcacggcgacaccattctggcttgtgctccgctgtactcctggagaactaaaaatgac
gtcccccactccgacgttacaggaacctgctatctctcggtgcagaacttcaccaaattt
gtggagtatgcaccctgtcggacagaaatcagcgaccgaggaggtcagggctactgccag
ggaggattcagtgctgacttcaccaaggatggtaaagtggtgttgggagggccgggcagc
tacttctggcaagggcagttaatctctgcagcaaaggaagacattgtcaaagcatactac
ccgggctattttatgcaggctgtcgagggccagatccagaccaaacaggctcaggttgcc
catgacgacagctaccaaggctactcggttgctgttggagaattcagtggagatgaagtg
gaagattttgtcgccggagttccgaaggaaaatatgctttatggtttggtgtccattttg
aacggtgcagatcttacgatcatgaagagctacagcggtgagcagatgggctcatatttc
ggctatgcactggcgacgactgacatcaacaacgatgggatgacggacctgctggtggga
gctcccatgctgatggtgaaaggctccgacggtcacctggaggagatgggtcgggtttat
gtttacctgcagcgcgggcccctggacctggagctgctcctgcctcacctgaccggcacg
caggcgtacgggagatttggcagcacggttgcacctctgggagatctgaaccaggatggg
ttcaatgatgtggctgtgagctgtccgttcgggggggaggaccggcagggactggtctac
atttataacggatactcggaaggcctgagggaaaagccgtctcaggtgatcgcgggccag
tgggcggccggggccttccctgccagcttcgggttcgccctcagaggagccaaggacctg
gacatgaacggatacccagatctcatcgttggagccttcggggttaataaggcggttctc
tataggtcccgccccatcgtcaacgccagtggttctctaatagtttcccccaccatgatc
aaccctgaagagaaaaactgcgaggtcaccgatggaaactccaggcttctcgtttcctgc
gttaacctgagtttctgcatatttgctgaggggaagcacctaccagacaacctagatttc
caggtggaggtgcagctcgacagtcaaaagcacaagcagaaaggtgcggtgaagagagct
ctgttcgaggattcccagcagcctttgctgcagaagagcgtgcgggtgcgccacggagaa
cgcgtgtgcaaccacacgaagatctacctaagagatgaaaaagacttcagggataaactc
tcccccatcttggtgtccttgaacttcagcttggacccacatgctgcagcagactcccat
ggcctgcagcccatccttaactaccagaccgccaacgttatcgtgcagaaggctcagatt
ctcttggactgtggagaagacaacatctgtgttcctgacttgaagctggcagttcatagc
aacaggaaggaagtctacctcggcgatgaaaacgcgctgaccttgactttcaacgccagg
aacgagggcgaggggggggcgtacgaggcggagctgcacgtggtgctgccctctgaagct
gactacagcgggatcgcccgcaacaacgagagcttcacccagctgacctgcagctacgag
acggagaaccagacgcgctacctcagctgtgatctgggaaacccgatgaaagctggcact
gatcttctggcaggcctgcgcttcacggtgccgaggctaaaggacacacacaagacggtg
cagttcgagttccagattcgcagtaaaaatgagaacaattcccacagcgaagttgtgccc
tataagcttgaggtggttgtccaagctgacgtcattttacagggcgtatcgcgacccgat
aaggtcttctttccacccgccaactggaaggttcccaaaaactacgaggctgagcaggat
gttgggcctgcgatggagcacatttatgagctggtgaacaatggccccagtcagatcagc
cacaccttcctggagctgcgctgtcctctccgagccccggcgcacaccctcctctacccc
ctggagttctccaccgaaggccccatcaactgcactgccaacctaaccatgaaccacctc
aatctcaaactccagcgcccgtccactgaatctccgatcctggctctgaaggcccctgag
caccacgtcgtgaggagggacgtccacaaggagcagttcgctcatctgactaacctgtct
tgctccaacgtggagtgctggacactccagtgcaacgtgggtctgctggggaaaggaacc
accgccatcctcaaagtgcgctcccgcatctgggcccagactttcaccgagaaaccttac
aagaaccatgtcctggagtgcctggccagatacaatgtcaagaagatgccatacgcaatc
ctgcccaaagtctatcccagtggacagaaaaaggtcgtgaccccggtggtgtggaacaag
ccggacatcgagaactcggtcccactgtggatcatcatcctagctattctggccggttta
ctgctcctggctctcctcatctacgtcctttacaggttcggctttttcaagcgatctgta
ccttacggcacggccatggagaaagcacaactgaaaccacaggctgcgtctgaggcctag
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