KEGG   Cololabis saira (Pacific saury): 133456907
Entry
133456907         CDS       T09849                                 
Symbol
plod1a
Name
(RefSeq) procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 isoform X1
  KO
K00473  procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 [EC:1.14.11.4]
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai00310  Lysine degradation
csai01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:csai00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    133456907 (plod1a)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csai04147]
    133456907 (plod1a)
Enzymes [BR:csai01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.4  procollagen-lysine 5-dioxygenase
     133456907 (plod1a)
Exosome [BR:csai04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   133456907 (plod1a)
SSDB
Motif
Pfam: 2OG-FeII_Oxy Anp1 2OG-FeII_Oxy_3 CKI
Other DBs
NCBI-GeneID: 133456907
NCBI-ProteinID: XP_061591587
LinkDB
Position
12:13569387..13590777
AA seq 732 aa
MRPASLLLFSWVCFGALFLQTSCEDRRLPAEKLLVVTVATNETDGFKRFLRSAKHFNYTV
KVLGRGQTWRGGDYMSAPGGGQKVNLLKAALQEMKDDDLIILFIDSYDVVFASSPKELLR
KFQQAKHKVVFSSESLIWPDRHLEDKHPYVREGNRFLGSGGFMGFLPNVRDMVANWTGKD
DDSDQLFFTKIYIDPVKRKSLNITLDSRCRLFQNLHGALDEVVLKFEDGRVRARNVVYDT
LPVILHGNGPTKLQINYLGNYIPNTWTFETGCVVCHENLLSLAALKESEYPLVMIAIFVQ
EPTPFVTVFFERLLKLQYPKDRLTLFVYNQQPHHERQVSSFLQDHGSLYRGVKSIGPEEE
MDGAAARDLALDVCRKDKDCEYFFNLDIEVVLKNENVLKILIEQNLPVVAPMITRTGRLW
SNFWGALSAEGYYARSEDYVDIVQGRRVGVWNVPYVSSVYLVKANLLRSELKDYEMFSSE
SLDPDMTFCLKIRDKGIFMYVSNMHTFGRILSTENYQTDHLHNDLWQIFENPLDWQARYI
HENYSRIMNDKLIETPCPDVYWFPIFSDVACNHLVEEMENFGKWSGGANVDQRIQGGYEN
VPTIDIHMNQVNFEKEWQKFLVEFIAPITERMYPGYYTKAHFDLAFVVRYKPDEQPSLRP
HHDASTFTINIALNEAVLEYQGGGCRFLRYNCSVQAPRKGWAIMHPGRLTHYHEGLPTTA
GVRYIAVSFVDP
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgaggccggcgtcgctgctactgttctcgtgggtttgttttggtgcacttttcctgcag
accagctgtgaggacagaagactcccggcggagaaacttctagtagtgaccgttgcaacc
aatgagacagatggcttcaagcggtttttgaggtcagctaaacacttcaattacacagtc
aaggtcctcggccgaggtcagacatggagaggaggggattacatgtcggctccaggagga
ggccagaaagtgaacctcctcaaagcagctcttcaggagatgaaggacgacgacctaatc
atcctctttattgacagctatgacgtggtcttcgcctcgagtcccaaagagctgctcagg
aagttccagcaggccaagcacaaggtggtgttctcgtccgagagcctgatctggcccgac
agacacctggaggacaaacacccctacgtgagggagggcaaccgtttcctgggctcagga
ggtttcatgggcttccttcccaacgtcagagacatggtcgctaactggacgggaaaagac
gacgacagcgaccagctgttcttcaccaagatttacatcgacccagtgaagaggaaatcc
ttgaatatcaccctggacagtagatgcagactgtttcaaaacctccacggagccctggac
gaggtggtgctgaagttcgaggacggtcgcgtacgagccagaaatgtggtgtacgatacg
ctgccagtcatcctgcacggaaacggaccaacaaagttgcagatcaactacctgggcaac
tacatccccaacacctggacgtttgagactggctgcgtcgtgtgtcacgagaatctgctt
tctctcgcagctctgaaggagagtgaatacccactggtgatgatcgccatcttcgttcag
gagcccactccatttgtcacggtgttctttgaacgcctcctgaagctccagtacccgaag
gacagactaacactcttcgtttacaaccagcaaccccatcacgagcgtcaggtcagctct
ttcctgcaggatcacgggagcctttatcggggcgtcaaatccatcgggcccgaggaggag
atggacggagccgctgctcgggacttggccttggacgtgtgccggaaggacaaggactgt
gaatacttcttcaacttggacattgaagttgtattaaagaacgagaacgttcttaaaatc
ctcattgaacaaaaccttccagtggtggcgcccatgatcactcgaacgggacggttgtgg
agcaacttctggggagctctgagcgcagaaggctactacgcaagatccgaggactacgtg
gacatcgtccagggacggcgggtgggcgtgtggaacgtcccgtacgtgtctagcgtgtac
ctggtgaaagccaacctcctgcgatcagagctgaaggactatgagatgttcagctcagag
agcctggaccccgacatgaccttctgcctcaagatccgggacaaggggatcttcatgtat
gtgtccaacatgcacacctttggtcgcatcctgtcaacagaaaactaccagacggatcat
ctgcacaatgacctgtggcagatctttgaaaaccccctggactggcaggcccgctacatc
cacgagaactacagccgcatcatgaatgacaagctgatagaaaccccgtgtccagatgtg
tactggttccccattttcagcgatgttgcctgcaaccaccttgttgaggaaatggaaaac
tttggaaaatggtcgggaggcgcgaacgtggatcaaaggatccagggaggctacgagaac
gtccccaccatcgatatccacatgaatcaagtcaactttgagaaagaatggcagaagttc
ctggtggagttcatagctcccatcacagagagaatgtacccaggttactacactaaggct
cactttgacttggcctttgtagttagatataagccagatgagcagccctctttgaggcca
caccacgacgcctccactttcactataaacattgcgctcaatgaagcggtccttgagtac
cagggtgggggatgcaggttcctgcgctacaactgctccgtgcaggctcctcgtaaaggc
tgggccatcatgcacccgggccgcctcacccactaccacgaaggcctgcccacgaccgcg
ggcgtccgctacatcgccgtgtccttcgtggacccctga

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