Cololabis saira (Pacific saury): 133456951
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Entry
133456951 CDS
T09849
Symbol
vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133456951 (vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133456951 (vps35)
Membrane trafficking [BR:
csai04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
133456951 (vps35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
FerA
Motif
Other DBs
NCBI-GeneID:
133456951
NCBI-ProteinID:
XP_061591681
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Position
2:1011012..1084027
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AA seq
798 aa
AA seq
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MPTTQQSPQDEQEKLLDEAVQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVR
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDDGEQPDGTEEMTGDIND
SIDFVLLNFAEMNKLWVRMQHQGHSRDREKREKERQELRILVGTNLVRLSQLEGVNVDKY
KQVVLPGVLEQVVNCRDSLAQEYLMECIIQVFPDEFHLQTLNPFLRSCAELHQHVNVKNI
IIALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLA
MKCYPDRVDYVDKVLESTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILMVLQL
KHFPPLFEYFDYESRKSMSCYVLSNTLDCNTTIVAQEQVDTILNLVSTLIQDQPDQPADD
PDPEDFAEEQSLVGRFIHLFHSDDPDQQYLILNTARKHFGAGGNQRIRYTLPPLVFAAYQ
LAFRYKKNSSADDKWEKKCQKIFSFAHQTISALIKAELSELPLRLFLQGALAAGEIGFEN
HETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMRCFSEENHEPLRTQCALAAS
KLLKKPDQCRAVSTCAHLFWSGRSTDKNGEEIRDGKRVMECLKKALKIANQCMDSSLQVQ
LFIEILNRYICFYERENDAVTVQVLNQLIQKIREDLPNLEASEETEQINKHFHNTLEHLR
LQRESPESEGPVYEGLVL
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
atgccaaccacgcagcagtctcctcaggatgaacaggaaaagcttctggatgaagctgtg
caagctgtcaaggtccagtcattccagatgaagcgatgcctggacaagaacaagttgatg
gatgcactgaaacatgcttccaacatgctgggagagctgaggacctccatgctttctcca
aagagttactatgagctctacatggctatatctgatgaactccactatctggaggtttat
ttgactgatgagttcgccaagggccgcaaggtggcagacctgtatgaactggtccagtac
gccggcaacatcatccccagactctatcttctgattacagtgggtgtggtgtacgttcgc
tccttccctcagtctcgcaaggacattctgaaggacttggttgagatgtgtcgaggtgtt
cagcacccactcagaggtctcttcctcaggaattatctgctgcagtgcacgcgcaatata
cttcctgatgacggagagcagcccgatggaacagaggagatgactggagacattaatgac
tccattgactttgttcttctaaactttgcggaaatgaacaaattatgggttcgaatgcag
catcaaggtcacagcagagaccgagagaagagagaaaaggaacgacaagaattgaggatt
ctagtgggcaccaatctagttcgcctcagccagctggagggcgtcaacgtggacaagtac
aaacaggtagttcttcctggagtgctggagcaggttgtgaactgcagagactcattggcc
caggaatatctaatggagtgcattattcaggttttcccagatgagttccatctacaaacc
ttgaacccctttctgcgttcctgtgcagagcttcatcaacacgtcaacgtcaagaacatc
atcattgctctcattgacaggcttgctctgtttgctcatcgagaagacggcccggggatc
ccagcggagatcaagctgttcgacatcttctctcagcaagtggccactgtcatccaatct
cgtcaggacatgccgtcagaggacgtggtctctcttcaggtgtctctcatcaacttagcg
atgaaatgctaccccgaccgggtggactacgtagacaaggtcctggagagcacggtggaa
atcttcaacaagctcaacctggagcacatagcaaccagcagtgctgtgtctaaagagctt
acccgacttttgaagatccccgtggatacgtacaacaatatcctgatggtgctgcagctc
aaacacttccccccgctctttgaatactttgactacgagtcccgcaagagcatgagctgc
tacgtgctgagcaacacgctggactgcaacaccaccatcgtggcccaggaacaggtggac
accatcttgaacttggtgtcgacactgatccaggaccagccggaccagccggccgacgac
cccgacccggaggactttgctgaggagcaaagccttgtgggtcgattcatccacctgttc
cactccgacgaccccgaccagcagtatctgattctcaacacggcccggaaacactttggt
gccggtggaaaccagaggatccgctacactctgccccctctggtgttcgctgcgtaccag
ctggccttcagatacaagaagaactcctcagcagatgacaagtgggaaaagaagtgccag
aagatcttttcatttgcccaccagaccattagtgctcttatcaaggccgagctttctgag
ctgccgctccgtctcttcctgcaaggagcgctggctgcaggagagattgggtttgagaac
catgaaactgtagcttacgaattcatgtctcaggccttctctctttatgaagatgagatc
agtgactccaaagcccagctggcagccatcacgttgatcatcggcacgtttgagcggatg
agatgtttcagcgaggaaaaccacgagcccctgaggactcagtgtgccctggctgcatcc
aaactcctgaagaaaccggaccagtgtagagctgtgagcacgtgtgcccacctcttctgg
tcgggccgcagcaccgacaaaaatggagaagagatccgtgatgggaagcgggtgatggag
tgtctaaagaaagccctgaagatcgccaaccagtgcatggactcgtctctgcaggtccag
ctgttcatcgagatcctgaacagatacatctgcttctatgagagagaaaatgatgcggtg
acggtccaggtgttaaaccagctgatccagaagatcagggaggatcttcccaacctggaa
gcaagtgaagaaactgaacagatcaacaaacatttccacaacacactggagcatctgcgt
ctgcagagagagtcccccgagtccgagggccccgtctacgagggcctggtcctttaa
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