Cololabis saira (Pacific saury): 133456966
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Entry
133456966 CDS
T09849
Symbol
fgd1
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 1 isoform X1
KO
K05720
FYVE, RhoGEF and PH domain containing 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
133456966 (fgd1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133456966 (fgd1)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
133456966 (fgd1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
FYVE_2
PH_13
RHG20_PH
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
133456966
NCBI-ProteinID:
XP_061591698
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All DBs
Position
12:complement(16016609..16047028)
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AA seq
1052 aa
AA seq
DB search
MQLNRACSAMPGFSCPPPPPPPPPPPSSFSSRFSTMRFSYHLPTAAAHGSATCRTGPSSS
SSSSVLTKSLPLEPSCSPCGHQVAPDGDVPEQSGSDPGPGSPFSGPASLKEGAGLTEHCS
SVNDTGPPELPVTLVTPPCRSRPPLLGPKPLVPPKPPHLQQQAGGSRPRPRALDKPLPPP
PPCRPLPADPRGGWPPPNQADDTTPPSCVLSLIEKFEREQIIVVPDITGGALCPRLQDPP
SSLSSSRPSSPLSSSVLSPPPSEREPPSDITSDDDITQEGEGGEEQVPADDDDDEDDEDE
ELAAACCDELHQKRLSMESGYSPSEKHLEDEAVAVEMGDQQQQPSLLCDQSELPSERLSL
PSSQTDGKLANRDSGIDSISSPSHSEELCFASVDDGGVAYPCSPALLPRLSSSSSYAGEG
EEGEARAGGRTRREFSEEGDSDLEEEEEAELTLVLEPPKTDRQDSSELSVHQRVFNIANE
LLHTETAYVSKLHLLDQVFCARLLEEARCRSSFPCDVVQGIFSNICSIYCFHQQFLLPAL
QKRMDEWDLNPRIGDILQKLAPFLKMYGEYVKNFDRAMELVNTWMERSAQFKAIIQEIQR
EERCGNLTLQHHMLEPVQRIPRYELLLKDYLHRLPEDAPDHRDAQKSLELIATAAEHSNA
AIRKMERMRKLLKVYELLGGEEDIVNPTNELIKEGHILKLSNKNGTTQDRYLILFNDRLL
YCVPKLRLMGQKYGVRTRIDVDGMELKETSSAAVPRTFLVSGKQRSLELQARTEEDKKDW
IKAIQATIQRHEQTAESFRHLSCSLRDDESTPPHSPSCVELGKRAPTPIREKEVTLCMKC
QEPFNSITKRRHHCKACGHVVCGKCSEFRARLSYDNNRTNRVCIDCYVTLVGASPSPAGL
SSSSQRRRSILEKQASLAAENSVMCSFLHHMEKGGGRGWQKAWFVIPENEPLVLYIYGAP
QDVKAQRSVPLIGFDVSLPESCDRLERRHAFKISQSHLTLYFCAEGEELQRRWMDVLSRA
GRGEEPLIHQPIAESLEEEGEELVAEAEGENT
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atgcagctgaaccgggcctgcagtgccatgcccgggttcagctgccctcctcctcccccg
ccgccaccgcctcccccctcctccttctccagcaggttcagcaccatgaggttctcctac
cacctccccacagcggcagcacacggcagcgccacctgcaggacaggaccctcctcctcc
tccagttccagcgtgctgacaaagagcctccctctggagccgtcctgctcaccgtgcggc
caccaggtggcgcctgatggggacgtccccgagcagtcaggctccgaccctggacccggc
tccccattttcaggcccggcctccctgaaagaaggggcgggtctaactgagcattgcagc
tctgtgaatgacacggggccaccggagctgccggttaccctggtaacgccaccatgtcgg
agcagaccgccactactggggcccaaacctctggtgccaccgaagcccccccacctccaa
caacaggccggagggtcaaggccacggccccgggccttagacaagcccctgccacctccg
cccccctgcagacccctcccagcagacccccggggaggctggcccccgcccaaccaggca
gacgacactaccccccccagctgtgtcctctcgcttatagagaaatttgagcgagagcag
atcattgttgttcctgacatcaccgggggagctctctgtccccgcctccaggaccccccc
tcctccctgtcttcttctagaccttcatccccgctgtcatcatcggtgctctcccctccc
ccgtcagagagggagccccccagtgacatcacatctgatgatgatatcactcaggagggg
gagggaggggaggagcaggtacctgctgatgacgacgatgatgaggatgatgaggatgaa
gagctggcggcggcgtgctgtgacgagctccaccagaagcgtctgtccatggagtcaggt
tacagcccctcagagaaacacctggaggacgaggcggttgccgtggagatgggcgaccaa
cagcagcagccatcgctgctgtgtgaccaatcagagctgccgtccgagcgtctgtccctc
ccgtcctcgcagacggacgggaagctggccaaccgcgacagcggcatcgacagcatcagc
tcgccatcacacagcgaggagctctgcttcgccagcgtggacgacgggggcgtggcttat
ccctgcagccccgccctcctgccccgcctgtccagctcctcctcctacgctggggagggg
gaggagggggaggccagggccgggggcaggacgaggagggagttctctgaggagggagac
agcgacctggaggaggaggaggaggcagagctgactctggtgctggaacccccgaagacg
gacaggcaggactcttcagagctgtccgtccaccagagagtcttcaacatcgccaacgag
ctgctgcacacggagacggcctacgtgtccaagctccacctcctggaccaggttttctgt
gccaggctcctggaggaggcgcgctgccgctcctcgttcccctgcgacgtggtccagggc
atcttctccaacatctgctccatctactgcttccaccagcagttcctgctgccagcgctg
cagaagcgcatggacgagtgggacttgaacccccgcatcggtgacatcctgcagaagctg
gctccgttcctgaagatgtacggggagtatgtgaagaactttgaccgggccatggagctg
gtgaacacctggatggagaggtcggctcagttcaaggccataatccaggagatccagagg
gaggagcgctgtgggaacctgactctgcagcatcacatgctggagccggtccagaggatt
cctcgctatgagcttctgctcaaagattacctgcatcgactgccagaggatgcgccggac
caccgagacgcccagaagtctctggagctgatcgccacagcagccgagcactccaacgcc
gccatcaggaagatggagcgaatgaggaagttactgaaggtgtatgagctgttaggaggc
gaggaggacatcgttaatccaactaatgagctcattaaagaaggacacatcctgaaactg
tccaacaagaatggcaccacgcaggaccggtacctcatcctgttcaacgaccgcctcttg
tactgtgtccccaagctgcgtctgatgggtcagaagtacggcgtccgcactcgcatcgat
gtggacggcatggagctgaaggagaccagcagcgctgccgtccccagaacctttctggtg
tcaggaaaacagaggtccctcgagctgcaggccaggacagaggaggacaagaaggactgg
atcaaggccatccaggcgaccatccagcgccatgagcagacggccgagagtttcagacac
ctgagctgttccctgcgagacgacgagtccacgccgcctcactccccgagttgtgtcgag
ttgggaaaacgagctccgactcccatcagagagaaggaagtgactctatgcatgaagtgt
caggaacccttcaactccatcaccaagagacggcaccactgcaaagcctgtggacacgtg
gtttgtgggaagtgctccgagttccgtgcacgtctgtcatacgacaacaaccgaactaac
cgtgtttgcatcgactgctacgtcaccctcgtaggagcgtcgccgtcgcctgctggactg
agcagcagcagccagaggaggcgctccatcctggagaaacaggcctcgctcgcagcagaa
aacagtgtgatgtgtagttttctccaccacatggagaagggaggggggcggggctggcag
aaggcgtggttcgtcatcccggagaacgagccgctggtgctctacatctacggagctcca
caggacgtgaaggcgcagcgcagcgtgcctctcattggctttgacgtttctctgcccgag
tcatgtgaccggctggagcgacgtcacgccttcaagatctcccagagtcacctgaccctg
tacttctgcgctgagggggaggagctacagcgcaggtggatggatgtcctgtcacgggcc
gggcgaggggaggagccactgattcaccaaccaatcgcggagagtctggaggaagaaggg
gaggagcttgttgctgaagcggagggggaaaacacgtga
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integrated database retrieval system
