Cololabis saira (Pacific saury): 133456970
Help
Entry
133456970 CDS
T09849
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b
KO
K14966
host cell factor 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03083
Polycomb repressive complex
csai04980
Cobalamin transport and metabolism
csai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133456970 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
133456970 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133456970 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csai01009
]
133456970 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133456970 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
csai03029
]
133456970 (hcfc1b)
Protein phosphatases and associated proteins [BR:
csai01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133456970 (hcfc1b)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
133456970 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
133456970 (hcfc1b)
MLL-HCF complex
133456970 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
133456970 (hcfc1b)
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
133456970 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
133456970
NCBI-ProteinID:
XP_061591708
LinkDB
All DBs
Position
12:complement(16239440..16268238)
Genome browser
AA seq
1537 aa
AA seq
DB search
MAEPATPAVLKPCWKRVLGWTGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTA
TNQWFIPAVRGDVPPGCAAFGFVCDGTRLLIFGGMVEYGKYSNDLYELQASRWEWKHLKA
KPPKNGPLPCPRLGHSFSLIGTRCYLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSSVF
GWEIPVTTGTPPPPRESHTAVVASSGGANKLVIYGGMSGCRLGDLWVLDVESLEWSRPTL
GGVPPLPRSLHSATTIKNKMYVFGGWVPLVMDDVKTATHEKEWKCTNTLACLNMDTMCWE
TVVIDADEENLPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLWSLETECPVAP
SRVQLVRANTTSLEVSWGPSQTADTYLLQLQKYDIRAMPSSSAAPATTPVANAPQIPTPA
ATTPAHQIVPKSGITLVPASAVAVSGSPLVSKTPAILRVSSAPVAGGGTPVVTVRQATPR
SPGALTTLPAGVRMVVPAQPLQTPISSSPQMSGMAALVAAAAVTQKIPPSTARAQNIPPG
GTIVKTVAVNNPATRLLKTAAAQVGGVSAVSSPASTSRPIITVHKSGTVTVSQQAQVVTT
MVGGVTKTITLVNSPLSMGGGGSLISNLGNLGNLGNLGKVVSMVQTKPVQTGAVTGQAGV
NPATHILQTKGRLPAGTILKLVTSADGKQTTILSTAHAGSTATKPTILSVSPTTSKPGTT
IIKTIPVSALQGVAGGNSPVTFLTSKMMTSGTAGKIFTALPKMSASSQQGLTQVVLKGAP
GSAGTILRSVPMGGVRLVSPGAVGSKPVTTLVVKSSSGVSSLETVTNLSTMVAEGAAAAT
IASTPITTLATIATLASQVSTTTPTGPRQVTLITTPSGAEAQPLVQDLPVSIMASPTSEE
PGTSTTTTTTTTAQAGQGDTAVTAGVMQICSNPPCETHETGTTNTTTTAGAGGVQQVCSN
PPCEIHETGTTQTTTVASARMNPELQVSSDQPVASLNGGTVCSNPPCETHETGTTNTATT
ATAQPAGDNQQVDSTEPAFDPTPSTAASQSRAVTTVTQATPTPGPSIPEISSLVGEGRME
SPEAVVMVTEADEGAEPMQTSGHSEDLMLSAASVLQVLVESGVTAAKISSSDSCVPQQLM
SLEGDGGAEVSGKTSLLVTAATDQLPIATDNAAQHATIQAVLHAAGDSEHERTIPIVLTQ
QELAALVQQQLQGVHQTQPELQPESQPQPEHSSVPTEGLAPADSLNDPAADGSGHETTSS
AITNAVARLASTFSPAQSLTPRQVKTSASSTGTEATNGMAATTAKPEPQARPVSQEDRWF
DVGIVKVTNMVVTHYYVPNDDAVADEDPGVTLDYSRMRRVELQPGTAYKFRVAGINICGL
GAFSEVSAFKTCLPGFPGAPCAIKISKSLDGAQLTWEPPTVTSGKISEYSVYLAIQSSQA
TPASASGPAQLAFMRVYCGSEPSCLVQAASLAKAHIDYTTKPAIIFRIAARNQKGYGPAT
QVRWLQEASKDPKAGVKRGGTSPDMKQIGPKKFRTDQ
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcccgccacccccgcggtgctgaagccctgctggaagcgggtcctgggctgg
accggccctgtgccgcggccccgccacgggcaccgggccgtggccatcaaggagctgatg
gtggtgttcgggggcgggaacgagggcatcgtggacgagctgcacgtctacaacaccgct
accaaccagtggttcatcccagcggtgcgcggtgacgtcccaccagggtgtgccgccttc
ggctttgtgtgcgatgggaccaggctgctgatcttcggagggatggtggaatatggcaaa
tacagcaacgacctgtatgagctgcaggccagtcgatgggagtggaaacatctgaaagcc
aaacctccaaagaacggcccgctcccctgcccccgcctcggccacagtttttctttgatc
ggtacccgctgctacctgtttggaggactggccaatgacagcgaggaccctaagaacaac
atccccaggtatctcaacgacttgtactgtctggagctgcggccaggctccagtgtgttt
ggatgggagattcccgtgacgacggggacgccgccgccacccagagaaagccacacggcg
gtggtggcgagcagcggcggagccaacaaactggtcatctacggtgggatgagtggctgc
aggctgggagacctgtgggtcctggatgtagagtctctggagtggagcagacccaccctc
ggcggggtgccccccctcccccgcagcctgcactctgccaccaccatcaagaacaagatg
tacgtgtttgggggttgggttcctctggtcatggatgacgtcaaaacagctacacatgag
aaggagtggaagtgcacgaacacactggcctgcctcaacatggataccatgtgctgggag
acggttgtgatagacgccgatgaggagaacctccccagagctcgggcaggtcactgcagt
gtggcaatcaactctaggctctacatctggagcggcagagacggatacaggaaggcctgg
aacaaccaggtgtgctgcaaggacctatggagcctggagacagagtgtcctgtggctccg
tctcgagtccagctggtccgggccaacaccacgtctctggaggtgagctgggggccgtct
cagacggcggacacctacctgctgcagctgcagaagtatgacattcgcgccatgccttca
tcttccgccgcccccgccaccactcccgtagctaacgcacctcagatccccacccctgct
gccacgacaccagcccaccagattgtcccgaagtctggtatcacactcgttcctgcctct
gctgtcgctgtatctggaagcccattggtgtccaaaactccagcaatcctgagggtgtca
tcagctcccgttgcagggggaggaacccctgtggtcacagtcagacaggccacgcccaga
tccccgggagctttgacaacacttcccgcaggtgttcgtatggtggtacctgctcagcct
ttgcagacgccaatcagcagcagtcctcagatgagcggcatggcggcgctggtggcggct
gctgcagttacccaaaaaatccccccgtccacagcgagggctcaaaacatccctccagga
gggaccattgtgaagacggtggcggtgaacaatcctgcgactcgattgttgaaaacagct
gctgctcaggtgggcggggtttctgcagtctcctcccctgcttccactagccggccaatc
atcactgtccataagtctggcacggtgacggtctcccagcaggctcaggtggtcaccacc
atggtgggtggagtcacaaagaccatcacgctggtcaacagtccattgagtatgggagga
ggcggatctctgatcagtaacctggggaacctggggaacctggggaacctggggaaggta
gtgtcgatggtccagaccaaaccagtccagaccggagcagttactggtcaggctggggtc
aacccagccacccacatcctccagacgaagggcaggctgcctgcaggaaccatcctgaag
ctggtcacatcagcagacggcaaacagaccaccatcctcagcaccgcgcacgcaggctcc
acggcaaccaaacccaccatcttgagcgtttccccgacaacctccaaacccggtactacc
atcatcaagaccatcccggtatcagcgctgcagggagtggcaggtgggaacagtccagtc
accttcctcaccagcaagatgatgacgtcaggaacagctgggaaaatattcactgccctc
ccaaagatgtctgccagcagccagcagggcctcacgcaggtggttctgaaaggagctcca
ggttcagcagggacaatcctcaggtctgtccccatgggaggagtcagactggtgtctcca
ggagctgttggttccaaacctgtcaccacgctggtcgtcaagtcaagctcaggtgtgtct
agcctagagacggtaacaaatctctccaccatggtagctgaaggagctgccgccgccaca
attgcctccacgcccatcaccaccctggcaaccattgccacgctggccagccaggtctcc
acgacaactcccacaggaccaagacaggtgactctgatcactactccgagtggagctgag
gctcagccgctggtccaggacctgcccgtctccatcatggcctcgccgacctcagaggaa
cccgggacttcaaccaccacgaccaccactactacggcccaggcggggcaaggagacaca
gcggtgacggcaggggtgatgcagatctgctccaacccgccctgtgagacccacgagact
ggaaccaccaacaccaccacgacagctggagctggaggagttcagcaggtgtgttcaaac
cccccctgtgagatccacgagaccggcaccacccaaaccaccacggtggcctcggcccgc
atgaacccggagctgcaggtgagttcagaccagcctgttgccagtctgaacggaggaacc
gtctgctccaacccgccctgtgagacccacgagaccggaaccaccaacaccgccaccacg
gctacagctcagccggccggagacaatcaacaggtagactccacagagcccgcctttgac
cccacgccctccactgcagccagtcagagcagagctgtgaccaccgtcacacaggccacg
cccacacctggaccatcaatacctgagatttcttcgttggttggagagggtaggatggag
tcacctgaagctgttgtcatggttacagaagcagatgaaggggcggagcccatgcaaaca
tccggccattcagaggacctgatgttgtcagcggcatcagtgttgcaggttctcgtagag
agcggtgtgacagcggccaagatatcatcctcggacagctgtgtccctcagcagctgatg
tcattagaaggagatgggggggcggaggtttcaggaaagacgtctctgctggtgacggcg
gccacagatcagctgcccatagcaacagacaacgcagctcagcatgcaacgattcaggcg
gtgctgcacgcagctggagactctgaacacgagcggactattccgatcgttctgacgcag
caggagctggcagcgctggtgcagcagcagctgcagggcgtccaccagacacagccagaa
ctccagccagagtctcaaccccaaccagagcacagcagtgtccccacagagggcctggct
ccagccgacagcctcaacgacccggcggcagacggcagcggacacgagaccacgtcctcc
gccatcaccaacgccgtcgcccgattggccagcacgttcagtcccgcccagtctttgact
ccccgtcaggtgaagacttcagcctccagcaccgggacggaagcgaccaatggcatggcg
gcaaccacagcgaagccagaacctcaggcgaggccggtgtcccaggaggatcgatggttc
gacgtgggcatcgttaaagtcaccaacatggtggtcacgcattactacgtccccaacgac
gacgccgtggctgacgaggacccgggtgtgacgctggactacagtcggatgaggagggtg
gagctccagccggggacggcctacaaattccgtgtggcggggatcaacatctgcggcctc
ggcgccttctcagaggtgtcggcgtttaaaacgtgtctgcctggtttccccggggcacca
tgtgccatcaagatcagcaagagcctggatggcgctcagctcacctgggaacctcccacc
gtgacatcggggaagatcagcgagtactcggtctacctggccatccagtccagccaggcc
acgcccgcctctgcttcgggccccgcccagctggccttcatgagggtgtactgcggctcc
gagccgtcctgcctggtccaggccgccagcctcgccaaggcccacatcgactacaccacc
aagcccgccatcatcttccgcatcgctgcacgcaaccagaagggctacgggccggccacg
caggtccggtggctgcaagaagcgtctaaagatcccaaagccggagtaaagaggggcgga
acttctcctgacatgaaacagatcggaccaaagaaattcaggactgaccagtag
DBGET
integrated database retrieval system