Cololabis saira (Pacific saury): 133456979
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Entry
133456979 CDS
T09849
Symbol
trim101
Name
(RefSeq) tripartite motif containing 101
KO
K10654
tripartite motif-containing protein 55
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133456979 (trim101)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133456979 (trim101)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133456979 (trim101)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
zf-RING_6
Sina_RING
Serine_rich
Ribosomal_L26
Zn_ribbon_FGT1_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
133456979
NCBI-ProteinID:
XP_061591725
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All DBs
Position
12:16608947..16628145
Genome browser
AA seq
478 aa
AA seq
DB search
MSLSADRSPLGGIKGAESEATLVTLEKQLMCPICLEMFRKPVVILPCQHNLCRKCANELY
QPSLFQARTTMSVNSGRFRCPSCRQEVVLDRHGVYGLPRNILVENIIDSYKQEISIPSPL
PTPPPPSQLTCSSHEDEKVNIYCLTCQVPTCSLCKVFGAHQSCQVAPLTDVHQQQKDELS
KGITSLMAFTDKVKTLINELEDTCRTIEENSKIQKQRVCDKFNQVLSILENRRKVMEQKI
SPELEEKAGYSQLLVRCYEERIEANRKLVQSTQSSMDELDMAAFVQNSRQLTTKVIAAAS
ACPSEMLKLGCENPHHNKLNFSKQERALKSISFMKVSEDVPEAQLDPEQENSVPNLDGVV
GSIKEPVPALLSPPLEPAGKEMASDPPATTLQRPSLESVGECMQLEQNEFDANEEGQGHF
NVESRKEMDEVQKALESPHPANEHQEGMSTQQAVTLIFYLLGFIAILQKLWDYIGCFI
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtcagctgaccgtagccccctggggggcatcaagggagcagagtctgaagca
actttagtgacgctggagaaacagctgatgtgtccaatctgcctcgagatgttcagaaag
ccagtggtgatcctgccatgccagcataacctctgcagaaagtgtgctaatgaactctac
cagccatcactgttccaggcccggaccactatgagtgtgaatagcggccgtttccgttgt
ccttcttgcagacaggaagtggtcctggatcgacatggtgtctatggccttccaagaaac
attctggttgaaaacatcattgatagttacaaacaagaaatcagtatcccaagccccctc
cctactcccccacctccttctcaattaacatgctctagccatgaggatgagaaggtgaac
atttattgtctcacctgtcaagttcctacatgttctctgtgcaaagtgtttggggctcat
cagtcctgccaggtagctcctctgacagacgtccaccagcagcagaaggatgagctgagc
aaaggaatcacttcgttgatggcgttcactgacaaagtcaagactctcatcaatgagtta
gaggacacttgtagaactatagaggagaactctaagattcagaaacagcgtgtgtgtgac
aagttcaaccaagtgctttccattctggagaacagacgtaaggtgatggaacagaaaatc
agccctgagctggaagagaaggcaggctattcccagttgctagtgcgatgctatgaggag
agaattgaagccaacaggaaactggtgcagagtacacagagcagcatggacgagcttgac
atggctgcttttgttcagaattcaagacaactgactacaaaagtaatagcagcagccagc
gcctgtccatctgagatgttgaaactaggttgtgagaatccacaccacaacaaacttaat
ttcagcaagcaagaaagggctctgaagagcatcagtttcatgaaggtgtcagaggatgtt
ccagaagcacaactggatccagagcaagaaaactcagtgccgaacctggatggtgttgtc
ggatcaatcaaagagccagttccagctctattaagccccccattagaaccagctggaaaa
gaaatggcctctgacccaccagctacaacactacagagaccctctctggagtctgttggg
gaatgtatgcagctggagcagaatgagtttgatgcaaatgaagaaggccagggacatttt
aatgtggagagcaggaaggagatggatgaggttcaaaaagcactggagtctccacatcct
gcaaatgaacaccaggagggaatgagcacgcagcaggctgtcacattgatcttctacctg
ttgggcttcattgccatcctgcagaagctttgggattatattggttgtttcatttga
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integrated database retrieval system