KEGG   Cololabis saira (Pacific saury): 133456979
Entry
133456979         CDS       T09849                                 
Symbol
trim101
Name
(RefSeq) tripartite motif containing 101
  KO
K10654  tripartite motif-containing protein 55
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:csai00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    133456979 (trim101)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:csai04121]
    133456979 (trim101)
Ubiquitin system [BR:csai04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    133456979 (trim101)
SSDB
Motif
Pfam: zf-RING_UBOX zf-C3HC4 zf-C3HC4_2 RING_XB3-XBAT31 zf-B_box zf-RING_5 zf-C3HC4_4 zf-RING_2 zf-C3HC4_3 zf-RING_6 Sina_RING Serine_rich Ribosomal_L26 Zn_ribbon_FGT1_2 zf-RING_11
Other DBs
NCBI-GeneID: 133456979
NCBI-ProteinID: XP_061591725
LinkDB
Position
12:16608947..16628145
AA seq 478 aa
MSLSADRSPLGGIKGAESEATLVTLEKQLMCPICLEMFRKPVVILPCQHNLCRKCANELY
QPSLFQARTTMSVNSGRFRCPSCRQEVVLDRHGVYGLPRNILVENIIDSYKQEISIPSPL
PTPPPPSQLTCSSHEDEKVNIYCLTCQVPTCSLCKVFGAHQSCQVAPLTDVHQQQKDELS
KGITSLMAFTDKVKTLINELEDTCRTIEENSKIQKQRVCDKFNQVLSILENRRKVMEQKI
SPELEEKAGYSQLLVRCYEERIEANRKLVQSTQSSMDELDMAAFVQNSRQLTTKVIAAAS
ACPSEMLKLGCENPHHNKLNFSKQERALKSISFMKVSEDVPEAQLDPEQENSVPNLDGVV
GSIKEPVPALLSPPLEPAGKEMASDPPATTLQRPSLESVGECMQLEQNEFDANEEGQGHF
NVESRKEMDEVQKALESPHPANEHQEGMSTQQAVTLIFYLLGFIAILQKLWDYIGCFI
NT seq 1437 nt   +upstreamnt  +downstreamnt
atgtctctgtcagctgaccgtagccccctggggggcatcaagggagcagagtctgaagca
actttagtgacgctggagaaacagctgatgtgtccaatctgcctcgagatgttcagaaag
ccagtggtgatcctgccatgccagcataacctctgcagaaagtgtgctaatgaactctac
cagccatcactgttccaggcccggaccactatgagtgtgaatagcggccgtttccgttgt
ccttcttgcagacaggaagtggtcctggatcgacatggtgtctatggccttccaagaaac
attctggttgaaaacatcattgatagttacaaacaagaaatcagtatcccaagccccctc
cctactcccccacctccttctcaattaacatgctctagccatgaggatgagaaggtgaac
atttattgtctcacctgtcaagttcctacatgttctctgtgcaaagtgtttggggctcat
cagtcctgccaggtagctcctctgacagacgtccaccagcagcagaaggatgagctgagc
aaaggaatcacttcgttgatggcgttcactgacaaagtcaagactctcatcaatgagtta
gaggacacttgtagaactatagaggagaactctaagattcagaaacagcgtgtgtgtgac
aagttcaaccaagtgctttccattctggagaacagacgtaaggtgatggaacagaaaatc
agccctgagctggaagagaaggcaggctattcccagttgctagtgcgatgctatgaggag
agaattgaagccaacaggaaactggtgcagagtacacagagcagcatggacgagcttgac
atggctgcttttgttcagaattcaagacaactgactacaaaagtaatagcagcagccagc
gcctgtccatctgagatgttgaaactaggttgtgagaatccacaccacaacaaacttaat
ttcagcaagcaagaaagggctctgaagagcatcagtttcatgaaggtgtcagaggatgtt
ccagaagcacaactggatccagagcaagaaaactcagtgccgaacctggatggtgttgtc
ggatcaatcaaagagccagttccagctctattaagccccccattagaaccagctggaaaa
gaaatggcctctgacccaccagctacaacactacagagaccctctctggagtctgttggg
gaatgtatgcagctggagcagaatgagtttgatgcaaatgaagaaggccagggacatttt
aatgtggagagcaggaaggagatggatgaggttcaaaaagcactggagtctccacatcct
gcaaatgaacaccaggagggaatgagcacgcagcaggctgtcacattgatcttctacctg
ttgggcttcattgccatcctgcagaagctttgggattatattggttgtttcatttga

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