Cololabis saira (Pacific saury): 133456998
Help
Entry
133456998 CDS
T09849
Name
(RefSeq) cadherin-4-like isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04514
Cell adhesion molecule (CAM) interaction
csai04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133456998
04519 Cadherin signaling
133456998
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133456998
Cell adhesion molecules [BR:
csai04515
]
Cadherins
Major cadherins
133456998
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
Ig_CLSTN
F59B103_C
Cadherin_CELSR2_9th
DUF2254
NCMAP
Motif
Other DBs
NCBI-GeneID:
133456998
NCBI-ProteinID:
XP_061591776
LinkDB
All DBs
Position
12
Genome browser
AA seq
933 aa
AA seq
DB search
MRTDFAVVLTAALLLDTFWRNNGERASKGPCRPGFSQSFYSVQISRNVLQGQSILKGTTL
SSQKVKFDDCMGNEAVVFQSNDPVFSVRTDGSIFAQGEGASLDELVQFKLTASAPHTHVW
ETVVQLALTDLVSPERNENEVTEEEWKVTKQKEKRESFQEPPSVIMFSGSGLNATKGLRR
QKRDWVIPPINVAENSRGPFPQMLVSIRSDQDQDISIRYSITGMGADQPPNEVFSIDPVV
GKMFVTKPLDREHRSSYHLRAHAVDMNGNQVENPIDLYIFVIDMNDNRPEFKNQVYNGSV
DEGSKPGTYVMHLSAFDADDNTTANGMVRYRILSQSPHSPIPNMFTINSETGDIVTVAPG
LDREKVSQYTIIVQATDMEGNLNFGLSNTATAIITVTDINDNPPTMTSRTFSGEVPENRV
DTVVANLTVLDADQPHSPNWNAIYRIISGDPAGHFIIRTDPVTNDGMVTVVKPVDFEMNR
AFMLTVVVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPYFPTNPKHIRFEEGVPAGTSL
TTFSASDPDRLQMQQIIRYSKLNDPADWLSINRTNGQIVATSILDRESIYVKNNIYEATF
LATDNGSPAASGTGTLQIYLIDINDNPPVLVPRNSQICERMNKNVNGVNITAADADTDPN
AGPFVFELPNFPTSIRRNWTISRLSGDYARLALRYQVYLEPGMYEVPIIVSDSGNPPLSN
RSVIKVKVCPCDDNGDCTTLGAVAAAGLGTGAIVSILICIIILLSLVLLFVVWIKRKEKE
RQTKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPDSLEHIMTKPPGIRRVDER
PIIPESQYPIRPVVPHPGDIGDFIHEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSS
LNSSSTGEQDYDYLNEWGPRFKKLADMYGGGDD
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgagaactgacttcgcagtggtcctgacagcagcgcttcttcttgacacgttctggagg
aataatggggagcgtgcctccaaaggtccctgccgacctggcttctcgcaaagcttttac
tctgtgcagatttcaaggaatgtactgcaaggccagagcatacttaaagggactacttta
tcatcacaaaaagtgaagtttgatgactgcatggggaatgaagctgtggttttccaaagc
aatgaccccgtcttcagtgtgcggacagatggatccatctttgctcagggagagggagcc
agcttggatgaactagtccagttcaaactgacagcgagtgctccacatacacatgtctgg
gaaactgtggttcaactggcactgactgacctagtatcacctgagcgaaatgaaaacgag
gtcacagaagaagaatggaaagtcactaagcagaaggagaagagagagtcgttccaagag
ccaccttctgtcatcatgttctcagggtcgggcctcaacgctaccaagggtttgaggagg
cagaagagggactgggtgatcccaccgattaatgtggcggaaaattctcgagggccgttc
ccacagatgctcgtcagtattcgttccgaccaggaccaagacatctcaattcgatacagc
atcactggtatgggagcagatcaaccacccaacgaggtattcagtattgacccagttgtt
ggaaagatgtttgtcaccaaacctctggatcgtgaacatcgatcttcttaccatctgcga
gcccatgctgtggacatgaatggaaaccaggttgagaaccccatcgatctgtatatcttc
gtcatcgatatgaatgacaacagaccagagttcaaaaaccaggtctacaatggttctgtg
gatgagggttccaaaccaggaacttatgtgatgcatctgtcagcatttgatgctgacgac
aacacaactgctaatggaatggtgcgctatcgaatcctgtcccaaagcccgcacagcccc
attcctaacatgttcaccatcaacagtgagactggcgatattgtgacagtggcacctgga
ctcgatcgagagaaagtgtcccagtataccatcattgtgcaagccacagacatggagggt
aacctgaactttggcctatccaacacagccactgccatcatcaccgtgacggacatcaat
gacaaccctcccacgatgacctccagaactttttccggggaggttccagagaatcgagtg
gatactgtggtggctaatctgaccgttttagatgcagaccagccgcactcacctaattgg
aacgccatctacaggatcatcagtggagacccagctggacatttcattatccgcactgat
cctgtcaccaatgatgggatggtcactgtggtcaaacctgtagactttgagatgaaccgt
gccttcatgctgacggtggtggtgtctaaccaggcccacctagccagtggcatccaatcc
tcgcttcagtccaccgctggagtcactatatctgtccaggacgtcaatgaacctccttat
tttcccacaaatccaaaacacatccggtttgaggagggtgttcctgctggtaccagcctg
acgactttctcagcctccgatcctgaccgactgcagatgcaacagataatcaggtattca
aagctgaacgaccctgcagactggctgtccattaacagaaccaatggtcagatagtagca
acgtcaatactcgaccgggaatctatctatgtgaaaaacaatatatatgaagctacattt
ctggcaacagacaatggctctcctgcagccagtggcacaggcacactgcagatctatctg
atagatattaatgacaaccccccagtgctggtgcccagaaactctcagatctgtgaaagg
atgaacaagaacgtcaatggtgtcaacattacagctgccgatgccgacacggatcccaac
gccggaccttttgtattcgaattgcccaacttcccaaccagcatacgacgcaactggaca
atttcacggttaagtggtgattacgcgcgcctggctctgcggtaccaggtatatttagag
ccaggaatgtacgaggtccccataattgtgtcagactcgggcaaccctccgttgtccaac
aggtcagtcatcaaagtgaaggtgtgtccgtgtgatgacaatggagactgcaccactctt
ggggctgtagcagccgcaggtctgggaactggagccatcgtctccatcctcatctgcatc
atcatactgctcagtctggtgctgttgtttgtggtgtggatcaagcgcaaagagaaggaa
aggcagacaaagcaactgcttattgaccctgaggacgatgtcagagacaacatcctgaaa
tatgatgaggagggaggcggagaagaggatcaagactacgacctgagccaactgcagcag
cccgactccttagagcacatcatgaccaagccacctggaatacgcagggtggatgaacgc
cccatcatcccagagtcccaatatcccatcagacctgttgtgccccaccctggagatatt
ggtgacttcatccacgagggtctgcgagcagcagacaacgacccaacggcccctccgtat
gactccctgctagtgtttgattacgagggcagtggctccactgccggatctgtcagctcc
cttaactcctccagcacaggagaacaggactatgactacctcaacgagtggggccctcgc
ttcaagaagttggccgacatgtacggaggaggcgatgattaa
DBGET
integrated database retrieval system