Cololabis saira (Pacific saury): 133456999
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Entry
133456999 CDS
T09849
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133456999
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csai03021
]
133456999
03036 Chromosome and associated proteins [BR:
csai03036
]
133456999
Transcription machinery [BR:
csai03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133456999
Coactivators
SAGA/TFTC/STAGA complex
133456999
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
133456999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
tRNA-synt_1c
Motif
Other DBs
NCBI-GeneID:
133456999
NCBI-ProteinID:
XP_061591778
LinkDB
All DBs
Position
12:complement(18033593..18053332)
Genome browser
AA seq
721 aa
AA seq
DB search
MQTSTSISSHGACAALSPGPAVNKADSTKTQTAAQVVSSAAATTTMRSPAILQNLRTSVP
ATTSPGGVRTIAPQMLAARLTQPQQHATNIQNIQLPPGMVLVRSESGQLLMIHQHTLAQM
QSQSAMTPRPTAPTSTPPVQITSLQTPAASVLARPVTPTTIIKQGSPVQTTGTATTTLQR
PPVLQNTIMLGGNAAATGQPLGTPIAVQPAGAVTQKMGPVVTTKTPPTPVSAETLDNVKK
CRNFLSTLIKLASNETQSSETTASVKELVKKLLEAKIEPEDFTSRLYQELNSSPQPYLVP
FLKRSLPALRQMTPDPDAFIQQSLLPSSSAQPAAAASTALTAVVLRPPLSTAVNTATSTA
SSKATVITLTQTPHNKPGMIVPQHQGTVVRQQVTLGPAPMVTVRDQTHSRIIVGQPQVVK
QLSAGLSSKVSAVKMLAPGVRGVQVLSQTSTADAQKSRLKEAGSGTFKDDDDINDVASMA
GVNLSEESARILATNSELVGIVTRSCKDETFLSTSPLTRLTLDIGKKFGVGELGTDVISY
ISHATQQRLQNLLEKVSHVAQQKNVTFKDDERHEQVSNVRSQFKFLEQLDQMEKQRKEEQ
EREILLKAAKSRSRQEDPEQLRLKQKAKEMQQLELAQIRQREANLTALAAIGPRKKRKMD
SPVRGASAEGSGSEPAGSSGSGSRQFTRQRVTRVNLRDLLFCLENEKETSRSQLLYKGFL
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacttccacttccatcagttctcacggcgcatgcgcagcgctgtcgcccggtcct
gctgtcaacaaagcagactccactaaaactcagactgctgcccaagtcgtgtcttcagct
gctgcgacgaccaccatgaggagtcctgctattttgcaaaacttgaggacttctgtacca
gcaacaacctctcctggtggagtgagaaccatcgctccgcagatgttggctgctcgactc
actcagcctcagcaacacgccacaaacatccaaaacattcaactccccccaggcatggtg
ttggtccgcagtgagagtgggcagttgctgatgattcaccagcataccttggctcagatg
cagtcacaaagtgccatgacaccacgacctacggctcccaccagcactccacctgtgcag
atcacatctctacagactccagctgcatcagtgttggctcgcccagttacgcccaccacc
attattaaacaaggctccccggtccagaccacaggcacagccaccaccacactgcagagg
ccccctgtgctgcagaataccatcatgctgggaggaaatgccgctgctaccggacagcca
ctaggaacacccattgcagttcagcctgctggagcagtcacgcagaagatggggcctgtg
gtgaccacgaaaacacctccaacacctgtctcagctgaaacactggacaatgtgaaaaag
tgtcgaaactttctgtccacactcatcaagctagcatccaatgaaacacagtcatcagaa
accacagccagcgttaaagagctggtcaagaagctgctggaagcaaagatagagcctgag
gatttcaccagcaggttgtaccaggaacttaactcttcacctcagccgtaccttgtacca
tttcttaagagaagtctcccagcactgcgccagatgaccccagaccctgatgccttcatc
cagcaaagcctgttgccttcatcaagtgctcagcctgccgcagcagcatccacagctctc
actgctgtggtgctgcgccctccgctctccaccgctgttaacacagccacaagcactgcc
tcaagcaaagccacggttatcaccctcactcagacgccccacaataaacctggaatgatt
gtgccccagcaccagggcaccgtggtgagacaacaggtcactctgggcccggctcccatg
gtaaccgtcagagatcaaactcatagccggatcattgtgggtcagccacaggtggtcaaa
cagctatcagcaggtttaagttcaaaagtttcagcggtgaagatgttggctccaggggtg
agaggtgttcaagttctcagtcagacctccactgctgatgctcagaagagcaggctgaag
gaagctggaagcggaactttcaaggatgatgatgatatcaatgatgtggcctcaatggca
ggtgtcaacttatcagaggagagtgcccgtatcttggcaaccaattctgagcttgttggg
attgtaacgcgttcctgtaaggacgaaaccttcctctccacctccccactcacccggcta
actctggatattggtaagaagtttggtgtcggcgagttaggcacagatgtgatcagctac
atttcacatgctactcaacaacggttgcagaacctcttggaaaaggtgtcgcatgtggca
cagcagaagaatgtaactttcaaggacgatgagcggcatgagcaggtcagcaatgttcga
tcccagttcaagttcctcgagcagctggaccagatggagaagcaaagaaaagaggagcag
gagagagagatcctcttgaaagctgccaagtctcggtcgcggcaagaagaccctgaacaa
ctccgactgaaacagaaggccaaagagatgcagcagttggagctggctcagatcaggcag
agagaagcaaacctgacagctctggcagcaatcggcccaaggaaaaaacggaagatggac
tctcctgtcaggggtgcaagtgcagagggctcagggtcagagcctgcgggctctagtggt
tcaggctccagacagtttacacggcagcgcgtcacaagagtcaacctccgggacctgctc
ttctgtctggagaatgaaaaagagaccagtcgctcacagctgctctataagggcttcctc
aaatag
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