Cololabis saira (Pacific saury): 133457092 Help Entry 133457092         CDS       T09849                                  Symbol prpf6 Name (RefSeq) pre-mRNA-processing factor 6   KO K12855   pre-mRNA-processing factor 6 Organism csai  Cololabis saira (Pacific saury) Pathway csai03040   Spliceosome Brite KEGG Orthology (KO) [BR:csai00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     133457092 (prpf6)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:csai03041]     133457092 (prpf6) Spliceosome [BR:csai03041]  Complex B   U4/U6.U5 tri-snRNP components    U5 snRNP specific factors     133457092 (prpf6)  Complex C    U5 SnRNP specific factors     133457092 (prpf6) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  PRP1_N TPR_14 TPR_19 HAT_PRP39_N Suf TPR_16 HAT_Syf1_CNRKL1_C HAT_PRP39_C HAT_Syf1_CNRKL1_N TPR_17 TPR_2 TPR_8 FAT TPR_1 ARM_TT21_C TPR_9 Mt_ATP-synt_B Motif Other DBs NCBI-GeneID:  133457092 NCBI-ProteinID:  XP_061591959 LinkDB All DBs Position 12:20954830..20972573 Genome browser AA seq 969 aa AA seqDB search MASSGGKQTSKIVSKNNSGGGGAAGSGGGAPVMPLASPLMGKKKKPFLGMPAPLGYVPGL GRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQMKKNQDDDDEDLNDTNYDEFNG YAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERRELREKEEIEKYRMERPKIQQQFS DLKRKLAEVSEEEWLSIPEVGDARNKRQRNPRYEKLTPVPDSFFSKHLQSGENHTSVDPL QGLGGLNTSYPGSMTPGLMTPGTGELDMRKIGQARNTLMDMRLSQVSDSVSGQTVVDPKG YLTDLNSMIPTYGGDISDIKKARLLLKSVRETNPHHPPAWIASARLEEVTGKLQVARNLI MKGTEMCPKSEDVWLEAARLQPGDTAKAVVAQAVRHLPGSVRIYIRAAELETDIRAKKRV LRKALENVSKSVRLWKTAVELEEPEDARIMLSRAVECCPTSVELWLALARLETYENARRV LNKARENIPTDRHIWITAAKLEEANGNTQMVDKIIDRAITSLRANGVEINREQWIQDAEE CDKAGSVATCQAVIRAVIGIGIEEEDRKHTWMEDAESCVSHGALECARAIYAHALQVFPS KKSVWLRAAYFEKNHGTRESLEALLQRAVAHCPKAEVLWLMGAKSKWLAEDVPAARSILA LAFQANPNSEEIWLAAVKLESENNEYERARRLLAKARSSAPTARVFMKSVKLEWVLGNIE AAQELCTEALKHYEDFPKLWMMRGQIEEQCESMDRAREAYNQGLKKCPHSVPLWLLLSRL EERVGQLTRARAILEKARLKNPQGPELWLESVRLEFRGGLKNIANTLMAKALQECPNSGI LWAEAVFLEARPQRKTKSVDALKKCEHDPHVLLAVAKLFWSERKITKAREWFLRTVKIEP DLGDAWALFYKFELQHGTEEQQEEVRKRCENAEPRHGELWCAESKHVLNWQKKTGEILAQ VAGKIKNTF NT seq 2910 nt NT seq  +upstreamnt  +downstreamnt atggcttcgtctggaggaaaacaaacgtccaaaattgtctccaagaacaactcgggaggc ggcggggccgcgggctccggcggcggggccccggtgatgcccctcgcctccccgctcatg gggaagaagaagaagccgttcctggggatgcccgcaccgctgggctacgtgccggggctg ggacgaggtgctactggcttcaccacccgttctgatatcggtcctgctcgggatgccaat gatccagtggatgaccgacatgcacctcctggaaaaaggacagttggagaccaaatgaaa aagaatcaggatgatgatgatgaagatctgaatgacaccaattatgatgagtttaacggt tatgcaggtagcttgttttctagcgggccctacgagaaagatgacgaagaagcagatgct atatatgcagcgttggacaaaagaatggatgaaaggcgaaaagaaaggagggaattgcga gaaaaggaagaaattgagaaatatcgtatggagcgaccaaagattcagcagcagttctca gacctgaagaggaagttggcagaggtgtctgaggaggaatggctgagcatccctgaagtt ggagatgctaggaacaagcgccagagaaatccccgctacgagaagctcacccctgtgcct gacagcttcttctccaaacacctccaaagcggagaaaaccatacaagcgttgaccctttg caagggctgggaggtctgaacacgtcttacccaggaagcatgacccctggtctgatgaca cctggaactggagaactggatatgaggaaaattggtcaagccagaaacactctcatggat atgaggctaagtcaggtgtccgactcagttagtggacagacagtggtggatccaaaaggt tacctgacagatctcaactcaatgatccccacgtatggaggagacatcagtgacattaag aaggcacgtctgctgctgaagtctgtgagggagaccaacccccatcatccgcctgcgtgg attgcttctgccaggctggaggaggtgactggtaaactgcaggtggccaggaacctaatc atgaaaggcacagaaatgtgtccaaagagtgaggatgtttggctggaagcagccaggctc caacctggcgatacagctaaagccgtagtagcccaggctgttcgccacttgccagggtcc gtccgcatctacatcagagccgctgagctggagacggacatcagagctaagaaacgggtc ctcaggaaagctttagagaatgtatccaagtcagttcggctgtggaagactgctgttgag ctggaggaaccggaggacgccagaatcatgctcagcagagctgtggagtgttgccctaca agtgtggagctgtggctggcactggcccgtttggaaacatatgaaaacgcccgccgtgtc ctgaacaaggctcgagaaaacatccccacagatcgccatatctggatcactgctgctaag ttggaggaggccaatggaaacactcagatggtggacaagatcattgacagagccatcact tctctgcgtgccaatggtgtggaaatcaacagagaacagtggatacaggatgcagaagag tgtgacaaagcaggcagtgtggctacatgccaggcagtgataagggcggtcatagggatt ggcattgaggaggaagaccgaaaacacacctggatggaggatgcagagagttgtgtttcc cacggagccctggagtgcgccagggccatctatgcccatgccctgcaggtgttccctagt aagaaaagtgtctggcttagagcagcatactttgagaagaaccacggcacaagagagtct ttggaggccctgctgcagagagcagtggctcactgcccaaaagcagaagtcttgtggctg atgggtgccaagtccaagtggctggctgaagatgtgcctgcagctcgaagtatcctcgct ctggccttccaggctaaccctaacagtgaagagatctggctcgctgccgtcaaactggag tctgagaataatgagtacgagagagctcgacgactgctggccaaggctcgcagcagtgca ccaacggccagggtgtttatgaagtcagtgaagctggagtgggtgttgggaaatatagaa gctgcccaggagctttgcaccgaggccctgaaacactatgaggatttccccaagctttgg atgatgcgaggccagattgaggagcagtgtgagagtatggacagggccagagaagcctat aaccaagggctgaaaaagtgtccccactcggtgcccctgtggttgctgctgtctcgtctt gaagagagagtgggacagctgacgagagccagagcaatcctggagaaggcccgactcaaa aacccacagggccctgagctgtggctggagtctgtcaggctggagttcaggggcggactg aagaacatcgccaacacgctgatggccaaagccctgcaggagtgccccaattcaggcatc ctttgggcggaggccgtgttcttggaggcccgacctcagaggaagacaaagagcgtggat gctttgaagaagtgtgaacatgacccccatgtcttgctcgctgtagcaaaattgttctgg agtgagcgtaaaataaccaaagcccgagagtggttcctcaggacggtaaagattgaacca gacctgggagatgcgtgggctctcttctacaagtttgagcttcagcatggcacagaggaa cagcaagaagaagtaagaaagcgatgtgagaatgccgagcctcgccatggagagctgtgg tgcgccgagtccaaacacgtcctgaactggcagaagaaaacaggagagatcttggcgcag gtagccggaaagatcaagaacacattctga

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