Cololabis saira (Pacific saury): 133457099
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Entry
133457099 CDS
T09849
Symbol
dhx35
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133457099 (dhx35)
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
133457099 (dhx35)
Spliceosome [BR:
csai03041
]
Complex C
Other components
Complex C specific factors
133457099 (dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
ABC_tran
AAA_19
Cas3-like_C_2
ResIII
nSTAND3
AAA_30
Flavi_DEAD
AAA_7
AAA_23
Motif
Other DBs
NCBI-GeneID:
133457099
NCBI-ProteinID:
XP_061591966
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All DBs
Position
12:complement(21941569..21949364)
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AA seq
699 aa
AA seq
DB search
MAAPLSTMRFWKPGAEAPGISEERELNSETTGSPIIFNPNTALSIEKQRQKLPVFKHRNN
ILYLVESFQTVIIVGETGCGKTTQIPQYLLEAGWAAEGKVIGVTQPRRVAAISVANRVAE
ERGALIGHEVGYTIRFDDCSDPQATRIKFLTDGMLVREMMADPLLKKYSVLILDEAHERT
LYTDIAIGLLKKIQKKRRDLRVIVASATLDAKKFHEFFNLNESGDPNKDTCGILTVEGRT
FPVDVFYTVSPVPDYVKATVETVMKIHETEDDGDVLAFLTGQDEVEKVVSLLQEQARSLS
RYGMKKHLRILPMYSGLPYAEQMKVFERAPPSVRKVLVATNIAETSITINGIVFVIDCAF
VKLRAYNPRTLIESLVVTPISKASASQRAGRAGRNRPGKCFRLYTEEDFEKLPASTVPEM
QRTNLAPVILQLKALGIDNVLRFSFLSPPPAQTMVQALELLYALGGLDHYGHLTDPMGVR
MAEFPLSPMFAKMLLESGNFGCSKEIVTIASMMQIQNIFVVPPNQKKAAAREHRKFAVAE
GDHLTMLNVYEAFIKHQKNSQWCQERFLNYKGLLRAVTVREQLRRLMNKFKVPRTSSEGD
PDVILKCIVSGFFANAARIHHSGSYRTLRDDLELHIHPNSVLYGEKPPKWVVFNEVVQTS
KYFMRDVTAVESSWLVELAPHFYKQAKHGSLASKRSRVL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcccctctccacgatgaggttctggaagccgggcgccgaggctccgggcatc
tcggaggagcgggagctcaactcggagaccaccggctcccccatcatcttcaaccccaac
accgccctctccatagagaagcagcggcagaagctgcccgtgtttaagcacagaaacaac
atcctgtacttggttgaaagcttccagaccgtaatcatagttggtgagactggatgtggc
aagacaacacaaataccacagtacctgctggaggctggctgggcagcagaagggaaggtg
attggggtgacgcagcctcgacgtgtggcagctatctcagtggctaaccgtgttgcagag
gagcgaggggctcttataggacatgaggtgggctacaccatccgatttgatgactgctct
gatccccaggccacaaggatcaagtttctaacagatggcatgctggtacgagagatgatg
gctgatccgcttttgaaaaaatacagtgttttgatcctagatgaagcccatgagagaacc
ctgtacacagacatagccattggtctgctgaagaagattcagaaaaagcggcgagacctc
cgggtgattgtggcctccgccactctcgatgccaagaaatttcacgagttcttcaacctg
aatgaatctggagatccaaacaaggacacatgtggaattctgaccgtagagggacgcaca
tttcctgtagatgtcttctacactgtcagtcctgtcccggattatgtgaaggccacagtg
gagacggtaatgaagatccatgagacggaggatgatggggacgtcctggcttttcttact
gggcaggacgaagtggagaaggtggtgtcccttctgcaggagcaggccagatctctgtcg
agatatggtatgaagaaacacctgagaattttgccgatgtattctggtctaccttatgct
gagcagatgaaggtgtttgagcgggctccgccttctgtgcgcaaggttttggtggccaca
aacatagctgaaacttccatcaccataaatgggatagtgtttgtcatcgactgtgcgttt
gtgaagctgcgggcctacaatcctcgcactctcattgaatccctcgtggttactcccatc
tccaaggcctcagccagccagagggctgggagagcaggacgaaaccgacctgggaaatgc
tttaggttgtacacagaggaagattttgagaagttgcctgcctctactgtgccagaaatg
cagcgcaccaatctggcccctgttatcttacagctcaaagcgttaggcatagacaacgta
ctgcggttcagctttctttcccctcctccagctcagaccatggttcaggctctggaactt
ctttacgctctgggaggtctggaccattatggccatttgactgatcccatgggtgtgcgg
atggcagagtttcctctcagccccatgtttgctaagatgctactagagtcaggaaacttt
ggctgctccaaagagattgttaccatagcgtcaatgatgcagattcaaaatatatttgtg
gtgccacccaatcagaagaaagctgctgcccgtgagcacaggaaatttgctgttgctgag
ggggaccatctcaccatgctgaacgtgtatgaagcattcattaagcaccagaagaactcc
caatggtgtcaggagcgttttctcaattacaagggtcttctgcgggccgtgaccgtgcga
gagcagctccgccgtctcatgaacaagtttaaagtaccacgaacttccagcgagggtgat
ccagatgtgattctgaagtgcattgtatctggtttctttgccaatgctgcccgcattcac
cattctggttcttaccggactttacgagatgatcttgagcttcacatccaccccaactca
gtgctgtatggagaaaaacctccaaagtgggtcgtctttaatgaagtggtgcagacgtca
aaatacttcatgcgggatgtgactgctgttgagtcgtcctggctggttgagttggcccct
cacttttacaaacaagctaagcatggttcactggccagcaagagatccagggtcctctaa
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