Cololabis saira (Pacific saury): 133457103
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Entry
133457103 CDS
T09849
Symbol
top1b
Name
(RefSeq) DNA topoisomerase 1 isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csai03032
]
133457103 (top1b)
Enzymes [BR:
csai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
133457103 (top1b)
DNA replication proteins [BR:
csai03032
]
Eukaryotic type
DNA Topoisomerases
133457103 (top1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
133457103
NCBI-ProteinID:
XP_061591973
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Position
12:complement(22025621..22045904)
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AA seq
761 aa
AA seq
DB search
MMSGDNGHGDSQVNCGSKGSETHKHKDKRKDKEHRHKEHKKDKEREKVKHSNSEHKEHSE
KKHRDKEKLKHSDGSLERQREKHKEKRKEDKIQSSHSDKPKKEKENGYARQTSPAVIKSE
PEEDSSFYSSHQHKTSKREYDNESEFKPKKVKVEHEKKAKKRKHEYEEDDRNEDVKHKKK
TKDKKVTDGKKVKKEEEKWKWWEEERSTDGSKWRFLEHMGPVFAPPYEPLPDKVTFYYDG
KPMKLSAPAEEVGTFFAKMLDHEYTTKDIFRKNFFKDWRKEMTSVEKSVITDLKKCDFSE
MNEYFKAQSESRKQMSKQEKQKIKEENERILQEYGFCMMDNHKERIGNFRIEPPGLFRGR
GDHPKMGMLKRRIRPEDVIINCSKDSKHPKPPPGTKWKEVRHDNKVTWLASWTENIQGSI
KYIMLNPSSRIKGEKDWQKYETARRLKKCVDRIRSQYREDWKSKEMRIRQRAVALYFIDK
LALRAGNEKEEGETADTVGCCSLRVEHIKLYTKIDHQEYVVEFDFLGKDSIRYYNKIGVE
KRVFKNLQLFLENKQAEDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNASITLQQQLKE
LTWSDESIPAKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDEKQSQLSATRKQ
LKAAKAAHKASRDEKSKKTVQVKHKAVERIEEQLMKLQVQATDREENKQIALGTSKLNYL
DPRISVAWCKKWGIPVEKIYNKTQREKFAWAIDMAEKDYEF
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtggagataatggacacggagactctcaggtcaactgtggatctaagggaagc
gagactcacaagcataaagacaagcgcaaagacaaggagcacagacataaagaacacaag
aaagacaaagagcgagagaaagtcaagcacagtaacagcgaacataaggaacactctgag
aagaaacacagagacaaagagaagctgaaacacagtgacggcagcttagagaggcaaaga
gaaaagcacaaagagaagaggaaagaggacaagattcagtcatcccattcagacaagcct
aaaaaggagaaggaaaatggatatgcaagacagacgagtcctgcggtcattaagagtgaa
cctgaggaagacagcagcttctactcctctcaccaacacaagacctctaaacgagagtat
gacaatgaatctgaattcaagcccaaaaaagtcaaggtggagcatgaaaaaaaagccaaa
aaaaggaaacatgagtatgaagaagatgacaggaatgaggatgtcaagcacaaaaagaaa
acaaaagacaaaaaagtaacagatggaaagaaagtcaaaaaagaagaggaaaaatggaaa
tggtgggaggaggagcgatctacagatggttctaaatggcgctttcttgaacatatgggt
ccagtctttgctcctccatatgaacccttgcctgacaaagtgacattttattatgatggt
aagcctatgaagcttagtgctcctgctgaagaggtaggcacattctttgccaagatgtta
gatcatgagtacactacgaaggacatctttaggaagaatttctttaaggactggagaaag
gaaatgacgtcagtggagaagtcggttatcactgacctgaaaaagtgtgacttcagtgaa
atgaatgagtacttcaaggcccaatcagagtctcgcaaacagatgtctaagcaggagaaa
caaaaaatcaaagaggaaaatgagcggatcctccaggagtatgggttctgtatgatggac
aaccacaaggagagaatcgggaactttcgcattgagccgccgggtcttttccgaggacga
ggcgaccatccgaagatgggaatgctgaaacgtcgcattagacccgaagatgtcatcatt
aactgtagcaaggactccaaacaccctaaaccacccccagggacgaaatggaaagaagtt
cgccacgataacaaggtgacctggttagcatcgtggacagagaacatccagggctccatc
aagtacatcatgttaaaccctagctccaggatcaagggggaaaaggattggcagaaatat
gagaccgcccggcgtttgaagaagtgtgtggatcgaattcgtagccagtatagagaggac
tggaagtcaaaagagatgaggatcagacagagggccgtggcactgtatttcatagacaag
ctggcactgagggcaggtaacgaaaaggaggagggggagacagcggacaccgttggctgc
tgctcactgcgggtggaacacattaaactgtacaccaagatagaccaccaggagtatgtt
gtggagtttgacttcttgggaaaagactcgatccgctactacaacaagataggggttgag
aaaagggtttttaaaaacctccaattgttcctggagaacaagcaggctgaagatgacctc
tttgacagactgaatacttctattctgaataagcacttgcaggaactgatggatggacta
acagccaaggttttccgtacctacaatgcctcaatcacgctgcaacagcagctcaaagag
cttacctggagtgatgagagcataccagcaaaaatcctgtcatacaaccgagccaatcgt
gcagtggcaattctttgtaaccaccagcgagctccacccaaaacatttgagaaatccatg
caaaacctccagactaagattgacgagaaacaaagccaactatctgcaaccaggaagcag
ctgaaggctgccaaggctgctcacaaggcctcccgtgatgaaaagagcaaaaagactgtg
caggtgaagcacaaagctgtggagaggatagaagagcaactaatgaagctccaggtgcaa
gccacggacagagaggaaaacaagcagattgctttgggaacctccaagctcaactatctg
gatccacgcatttctgttgcttggtgcaagaagtggggcattcctgtggaaaagatctac
aataaaacccagagagagaagtttgcctgggcgattgacatggctgaaaaggattatgaa
ttttaa
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