Cololabis saira (Pacific saury): 133457160
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Entry
133457160 CDS
T09849
Symbol
hoxc11a
Name
(RefSeq) homeobox protein Hox-C11a
KO
K09296
homeobox protein HoxC/D11
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133457160 (hoxc11a)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
133457160 (hoxc11a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3528
Homeodomain
TFIIA
Homeobox_KN
Trypan_PARP
Siah-Interact_N
Motif
Other DBs
NCBI-GeneID:
133457160
NCBI-ProteinID:
XP_061592080
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Position
12:complement(24749353..24753748)
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AA seq
327 aa
AA seq
DB search
MFNSVNLGNFCSQTRKDRTSDFGDRTGCASNIYLPSCTYYVPEFSAVSSFLPQAPSRQIS
YPYSTNLSQVQPVREVSYGLDPTSKWHHRSNYASCYSGEDLVHRDCLPPSTMTEMLMKNE
SVYSHHHHHHTHPGSNHPSTGFYSGVGKNNVLPQGFDRFFETAYCSSTDHQSDNCLQKGE
GGKLESDSQQQQQPQQQQQQQQQPPTASGPGAPEQEKDPDDEEEEHTNPGSCTSSSAATK
DGNASKSSHSSVPRTRKKRCPYSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVK
IWFQNRRMKEKKLSRDRLQYFSGNPLL
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactcagtgaatctgggcaacttctgctctcagacgcgcaaagaccggacatcc
gactttggggacaggacgggctgcgcgtccaacatctacctccccagctgcacctactac
gtgcccgagttttccgccgtctcctcgtttcttccgcaggccccgtcccgacaaatcagc
tacccttattccacaaatctgtctcaagtgcagccggtacgggaagtttcatacggcttg
gaccctacgagcaaatggcaccacaggagcaactatgcatcgtgctactcgggagaggat
ctggtgcatagggactgtcttccaccatccaccatgacagaaatgctcatgaagaacgag
agcgtttacagccaccaccatcaccaccacactcacccgggctccaatcacccttccacg
gggttttactccggcgtggggaagaacaacgtcctcccgcaaggtttcgaccgctttttt
gagaccgcatactgcagcagcacggaccatcagtcagacaattgtttacaaaagggcgag
ggggggaagctggaaagcgactcccaacagcaacagcaaccgcagcaacagcagcagcag
cagcagcagccgcccacagcctccggacccggagccccggagcaggagaaagacccggac
gacgaggaagaggagcacacgaatccgggctcttgcacttcctcctccgcagcaaccaag
gacggcaacgccagcaagagcagccactcgagcgttcctcgtacaagaaagaagaggtgt
ccctattccaagtttcagattcgagagctggagcgggaattcttcttcaacgtttacatc
aacaaagagaaaaggcttcagctctcccgaatgctaaaccttaccgaccgccaggtgaaa
atctggtttcagaatagaaggatgaaagagaagaagctgagcagagatcgcctccagtat
ttctctggaaaccccctattgtga
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integrated database retrieval system
