Cololabis saira (Pacific saury): 133457197
Help
Entry
133457197 CDS
T09849
Name
(RefSeq) dihydropyridine-sensitive L-type skeletal muscle calcium channel subunit alpha-1-like
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04010
MAPK signaling pathway
csai04020
Calcium signaling pathway
csai04260
Cardiac muscle contraction
csai04261
Adrenergic signaling in cardiomyocytes
csai04270
Vascular smooth muscle contraction
csai04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133457197
04020 Calcium signaling pathway
133457197
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
133457197
09153 Circulatory system
04260 Cardiac muscle contraction
133457197
04261 Adrenergic signaling in cardiomyocytes
133457197
04270 Vascular smooth muscle contraction
133457197
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133457197
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
133457197
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
CAC1F_C
Motif
Other DBs
NCBI-GeneID:
133457197
NCBI-ProteinID:
XP_061592160
LinkDB
All DBs
Position
12
Genome browser
AA seq
1851 aa
AA seq
DB search
MATNLESTKSVIMNEEELKRKQKEKLKKMQATGGNPRPARSLFFLTLKNPFRKACINIVE
WKTFEIIILLTIFANCIALAVFLPMPEEDTNNTNTSLESLEYIFLIIFTAECFLKIIAYG
LVFHEGAYLRNCWNILDFVIVFMGLFTFALDTINKIAGVPMEKGGGFDMKALRAFRVLRP
LRLVSGVPSLQVVMNSILKAMLPLLHIALLVFLLVTIYAIMGLELFKCKMHKTCYYTGTN
IYATAEGELPAPCAQAGNGRRCIINGSECRPGWEGPNNGITHFDNIGFAMLTVYQCITME
GWTKVLYWVNDAIGNEWPWIYFVPLILLGSFFVLNLVLGVLSGEFTKEREKARSRGEFQK
LRERQQLDEDLHGYMEWITHAEVLDADREGKGLLPLTSGDSDTDSLYDLEGKSRIIYFYR
LARRWNRFFRMKCLVYVKTESFYWVVMILVLLNTLTIATEYHHQPASMTSLQDVASRILL
VLFIIEMFIKMYAFGPRAYFMSLFNRFDFFVVLCGILEMILLSAGAVTPLGFSVLRCIRL
LRILKVTKYWTSLSNLVASLLNSVRSIASLLLLLFLFIVIFSLLGMQVFGGKFNFDHHRP
RRSNFDNFPQALISVFQVLTGEEWTTIMYNGIMAHGGPAIPGILVSIYFIILFVCGNYIL
LNVFLAIAVDNLAEAESLTSAQKEKAEEKLRKKLLRSKMPEKTDEERERIAKKLAEQRAK
IENMPTTAKLKIDEFESNVNEVKDPFPPADFPGDDEEEEPDIPISPRPRPMADLQLKEEA
VPLPEASSFFIFGPQNKFRKLCYKIINASSFTNLILLFILLSSISLAAEDPIDPKSYRNQ
ILAYADIVFTTVFTIEIVLKMTVYGAFMHEGSFCRNSFNILDLIVVGVSLLSMGMESSAI
SVVKILRVLRVLRPLRAINRAKGLKHVVQCVFVAIKTIGNIVLVTMLLNFMFACIGVQLF
KGKFYSCTDPSKMTAEECQGLFLKPMENSLQDTVVAKREWLNSDFNFDNVLNGMLALFTV
ATFEGWPKLLYRAIDSAEEDMGPVYNHRVDVSIFFIIYIILIAFFMMNIFVGFVIVTFQE
QGEQEYQDCELDKNQRQCVQYALKARPLRCYIPKNPYQYRVWYIVTSSYFEYLMFFLIML
NTLCLGMQHCNQSDHVTKLSDMLNLIFTILFTVEMILKLMAFKARGYFGDPWNVFDFVIV
IGSVVDVILSEIDSALASSGGLYCVHGCPETNPMQLIAASENASVSITFFRLFRVMRLVK
LLNRSEGIRNLLWTFIKSFQALPHVALLIVMLFFIYAVIGMQIFGKVALVDGTQINRNNN
FQTFPQAVLMLFRCATGEAWQDVMMASMYGKKCDPKSDFLPGEEYTCGSNFAVFYFISFY
CICAFLILNLFVAVIMDNFDYLTRDWSLLGPHHLDEFKKIWAEYDPEATGRIKHLDVVTL
LRSIQPPLGFGKFCPHRAACQRLVGMNMPLNSDGTVTFNATLFALVRTALKIKTEGNFEQ
ANEELRAIIKKIWKRTSMKLLDQVIPPIGDDEVTVGKFYATFLLQEHLRKFMQRQEEYYG
YRPSKKSASGPEIQAGLRSIDEEAAPEMHRAISGDLQNDEEIDRAMLEAGEEAIFQRAHA
LFGNQVDSFSAEPADAQQSQMTNQRPLQFSESHPESPPNSAALVSDTEFFPTTAPKSNTN
NNAFADFSFEREGSTGEFYNPDEDEEPAIRGSWRFTVRTDKTQFPYEPDYGETRSQSSHT
AADQLVEEVLAKGGLASLARDPDFVSATKKEMAEALQIPMAEMEGVAQGILKERSGSIPS
IKKRRPIPVPPTNPAGVAQETSQPDPAVRRKRRPIPMIPALTKPDEANSAV
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaacctggaatcaaccaagtcggttatcatgaatgaggaggagctgaagcgg
aagcagaaagagaaactgaaaaagatgcaagccactggaggcaaccctcgccctgcaaga
tccctcttcttcttgaccctcaaaaatccttttcgcaaggcctgcatcaacattgtggag
tggaaaacctttgagatcatcatcttattgaccatcttcgctaactgcattgctctggct
gtgttcctgcccatgcctgaagaagacaccaacaacaccaacactagtttggagagtctg
gagtatatcttcctgatcatcttcacggcggagtgttttctgaagatcatagcgtatggg
ctcgtgttccatgaaggggcctatttacggaactgttggaacatattggattttgtcatc
gtcttcatgggtcttttcacctttgcattggataccataaataagatagcaggagtgcca
atggaaaaaggtgggggatttgacatgaaggcgctgagggccttcagagtactgcggccc
cttcgcctcgtttccggagtccccagcctgcaggtggtgatgaattccatcctcaaagcc
atgctgcctctgttgcacatcgccctgctggtcttcctgctggtcacaatctatgccatt
atgggacttgagctgtttaagtgcaaaatgcataagacttgctactacactggcacaaat
atctatgcaacagcagaaggtgagctgcctgctccgtgtgctcaggctggtaatggacgg
cgttgcatcatcaacggctctgagtgccggcccggctgggaaggtcccaacaacggcatc
acccactttgataacattggctttgccatgctgactgtgtaccagtgtatcaccatggag
gggtggaccaaagtgctctactgggttaatgatgccataggaaatgaatggccatggatc
tactttgttcctctcattctgctgggttccttctttgtactcaatcttgtcctcggcgtg
ctcagtggagagtttaccaaagagcgtgaaaaggccagatcccgaggagagttccagaag
ctgcgagagcgccagcagttggatgaggaccttcacgggtacatggagtggatcactcac
gctgaagtcctggatgccgacagagagggcaaaggtctcctacctttgaccagtggagat
tcagacacggacagcctgtacgacctggaaggcaagagccgtatcatctacttctaccgc
ttggctcgtcgctggaaccgtttcttcaggatgaagtgcttggtgtacgtgaagaccgag
agcttttactgggtggtgatgatccttgtcctcctcaatactctgaccatagccacagag
taccaccaccaacccgcctcgatgacttccctgcaagatgtggctagtcgtatactactt
gtgctgttcatcattgagatgttcatcaagatgtacgcattcggacccagagcgtacttc
atgtctctgtttaatcgtttcgacttctttgtggtgctttgtggcatcctggagatgatc
ctgttgtcagcaggagctgtgactcccctgggtttctccgtgctcaggtgtatacgcctc
ctgaggatcctcaaagttacaaagtactggacctctctaagtaatcttgtggcctctctc
ctcaactctgtccggtcaattgcctcgctgctgctccttctcttcctttttatcgtgatc
ttctccctcctgggaatgcaggtgtttggtgggaagttcaactttgatcaccaccggccc
agacgcagtaactttgacaatttccctcaggccctgattagtgtgtttcaggtcctcaca
ggggaggaatggaccaccatcatgtacaatggtattatggcccatggagggccggccatc
cctggcatcctagtttccatctactttatcatccttttcgtttgtggaaactatatcctc
ctcaatgtcttcttggccatcgctgtggacaatctggcagaggctgagagtctgacttca
gctcagaaagaaaaagcggaggagaaattaaggaagaagctactaaggtcaaaaatgcct
gaaaagactgatgaggagagggaaaggattgctaagaagctggctgagcagagggccaag
attgagaacatgcccaccacagccaagctcaaaatcgatgaatttgagtcgaacgtcaat
gaagtgaaggatccatttccacctgctgatttcccaggtgatgacgaggaagaggagcct
gatatccccatcagcccgcggccccggccgatggcagatctgcagctgaaggaagaggcg
gttccattacccgaagccagctcctttttcatttttggacctcagaacaagttccgtaag
ctgtgctacaagatcatcaacgcttcatccttcaccaacttaatccttctgttcatcctg
ctctcctccatctcgctggcagctgaggaccctatcgatccaaaatcctacagaaaccag
atcttggcctatgctgatattgtcttcactactgtgttcaccattgagattgtactgaag
atgacagtgtacggagcgttcatgcacgaaggctctttctgtcgtaattctttcaacatc
ctggatctgatcgtggtcggggtgtccctcctgtccatggggatggaatccagtgccatc
tctgtggtgaagattctcagggtgctgagggtgctcagaccgctccgagccatcaaccga
gccaaagggttaaagcatgtggtccagtgtgtgtttgtggccatcaaaaccattggtaac
atcgtcctggtcaccatgctcttgaatttcatgtttgcctgcattggagtgcagctcttc
aagggtaaattctacagctgcacagacccatccaaaatgactgcagaggaatgccaggga
ttatttttgaaacccatggagaattccctacaagacacggtggtggctaaaagagaatgg
ctcaacagtgacttcaactttgacaacgtcctcaacgggatgctggctctgttcacagtc
gccacatttgagggctggccaaaactcttgtaccgagccatcgattcagccgaagaagat
atgggtccagtctacaaccacagagtcgacgtgtccatcttcttcatcatctacatcatc
ctcatagccttcttcatgatgaacatatttgtgggttttgttatcgtaactttccaggag
cagggcgaacaggagtatcaggactgtgagctggacaaaaaccagcgtcaatgtgtgcag
tacgccctgaaggctcgcccgctgagatgctacatcccaaaaaacccataccagtacagg
gtctggtacattgtcacctccagctactttgagtacctcatgttcttcctgattatgctc
aacaccttgtgtctggggatgcagcactgtaaccagtcggaccatgttaccaagttgtcg
gacatgctgaacttgatcttcactatactcttcacagtggaaatgatacttaaactcatg
gccttcaaagcgcggggctactttggagacccctggaacgtctttgactttgttattgtc
atcggcagtgttgtagatgtcatcctgagtgaaatcgatagcgccctggcctccagtgga
ggactgtactgtgtccatggctgtcctgagacaaatcctatgcaattaattgcagcctct
gaaaatgcctcagtttccatcacattcttccgacttttccgtgttatgcgtctggttaaa
cttctcaaccgatctgagggcatccgtaaccttttatggacattcatcaagtccttccag
gctctccctcatgtagctctgctcatcgtgatgctcttcttcatctacgctgttataggg
atgcagatctttggaaaggttgctttagtggatggcacccaaatcaaccgcaacaacaac
ttccagacattccctcaggctgtcctgatgttattccgatgtgcaactggagaggcttgg
caggacgtcatgatggcttccatgtacgggaagaagtgtgaccccaagtcggactttctg
ccaggagaggagtacacctgcgggtccaactttgctgtcttttacttcatcagcttctac
tgtatatgtgccttcctgatcctcaatctttttgtcgccgtcatcatggacaactttgac
tacctgacacgtgactggtctcttcttggtccacaccatctggatgagtttaagaaaatc
tgggctgaatatgaccctgaagccacagggagaatcaaacatctggatgtggtgacactc
ctgcgaagcatccagcctccactgggctttggcaagttctgtccccatcgtgctgcatgc
cagcgcttggttggaatgaacatgcctctcaacagcgacggcaccgtcacgttcaatgcc
acgctgtttgcgctggtcaggactgcactcaaaatcaaaacagaaggtaattttgaacaa
gccaatgaggagctcagagccattataaagaagatctggaaacgcaccagtatgaaactg
ttggaccaggtcattcccccaataggagatgacgaggtgactgtggggaaattctacgcc
accttcctgctccaagaacatttgcgcaagttcatgcagcgccaagaggagtattatggc
taccgtccaagtaagaagagtgcgtcaggtccagagatccaggcgggtttgagaagcata
gatgaggaagcagctccagagatgcacagagctatttcaggagacctccagaatgacgaa
gagatagaccgagctatgctggaggcaggagaagaggccattttccagcgtgcacacgct
ctgtttggtaatcaagtggattccttctctgccgagcctgccgatgctcagcagtcccag
atgaccaaccagcggcccctccagttctcagagagccaccccgagtctccaccaaactct
gccgccctggtgtcagatacagaatttttccccacaactgcacctaagagcaacaccaac
aacaatgcttttgcagacttttcttttgaaagagaaggcagtacaggagagttttacaat
cccgatgaggatgaagagccagctataaggggctcgtggagattcactgtgagaactgac
aaaactcagttcccttatgagcccgactatggtgaaactcggagtcagagctcccacact
gcagccgaccagctggtggaggaggttcttgcaaaaggaggcctagcctctttggccaga
gacccagactttgtctctgcaactaagaaggagatggctgaagccttgcagatccccatg
gcagagatggagggagtggctcagggcatcctgaaagaacggtccggcagcatcccctca
atcaaaaagagacgccccattcccgtccctcctaccaaccctgctggggtagcacaagaa
actagccaaccagatccagctgtcagaagaaaaagacgtccaattcccatgattcccgcc
ctaacgaagcctgacgaggccaattctgcagtgtag
DBGET
integrated database retrieval system
