Cololabis saira (Pacific saury): 133457198
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Entry
133457198 CDS
T09849
Symbol
smc1a
Name
(RefSeq) structural maintenance of chromosomes protein 1A
KO
K06636
structural maintenance of chromosome 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04110
Cell cycle
csai04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
133457198 (smc1a)
04114 Oocyte meiosis
133457198 (smc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csai03036
]
133457198 (smc1a)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
133457198 (smc1a)
Meiosis-specific proteins
Cohesin complex and associated proteins
133457198 (smc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
133457198
NCBI-ProteinID:
XP_061592161
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Position
12:complement(25699281..25709831)
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AA seq
1231 aa
AA seq
DB search
MGYLKLIEIENFKSYKGRQIIGPFHKFTAIIGPNGSGKSNLMDAISFVLAEKTSNLRVKT
LKDLIHGAPVGKPAANRAFVSMVYQEDNGEERSFTRAIIGSSSEYRINSKVVGLPEYSEE
LEKLGILIKARNFLVFQGAVESIAMKNPKERTALFEEISRSGELAQEYDRRKKEMVKAEE
DTQFNYHRKKNIAAERKEAKQEKEEAERYQRLKDEVARASVQLQLFKLYHNETEIEKLNK
ELGQRNKEIDKDRKKMDHVEEELKDKKKELGRLMREQQTIEKEIKEKDSELNQKRPQYIK
AKENTSHKIKKLEAARKSLQNAQKMYKKRKGDMDELDKEMRAVELTKQEFEERMEEEAQS
QGQDLTLEENQVKQYHRLKEEASKRAATLAQELEKFNRDQKADQDRLDLEERKKVETEAK
IKQKIREIEENQKRIEKLEDYISTSRQSLDEQKRMEEELTEEVETAKKRIDEINMELNQV
MEQLGDARIDRQENSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGK
NMDAIIVDSEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTDEKLRELRGAKLVIDVIRY
EPPHIKKALQYACGNALVCDNVEDARRIAFGGPYRHKTVALDGTLFQKSGVISGGASDLK
AKARRWDEKAVDKLKEKKEKLTEELKEQMKAKRKEAELRQVQSQAHGLQMRLKYSQSDLE
QTKTRHLSLNMQEKSKLESELANFGPRINDIKRIIHSREREITDLRDRMNLVEDEVFIEF
CKEIGVRNIREFEEEKVKRQNEIAKKRLEFETQKTRLGIQVDYEKNQLKEDQEKVMMWEQ
TVKKDEAEIERLKKEEHRHMKIIDETMAQLQDLKNQHLTKKSEVNDKNHDMEEIRKKLGG
ANKELTQLQKEVTAIETKLEQKRSDRHNLLQACKMQDIRLPLRSGTMDDISQGEGSSQAD
ESSSQRTSSTVLAKEALIEIDYSSLSEDLKDALSEEEIKAETNGLQQRLNEQQSILQRIS
APNMKAMEKLESVRDKFQETSDEFEAARKRAKKAKQAFEQIKKERFDRFNTCFESVATNI
DEIYKALSRNSSAQAFLGPENPEEPYLDGINYNCVAPGKRFRPMDNLSGGEKTVAALALL
FAIHSYKPAPFFVLDEIDAALDNTNIGKVANYIKDQSEQNFQAIVISLKEEFYTKADSLI
GVYPEQGDCVISKVLTFDLSQYPDANPNPNE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgggttatttgaaactcatagaaatagagaattttaagtcgtataaaggaagacagatc
attggaccgtttcataagttcactgcaatcatcggacctaatggatctggaaagtccaac
cttatggatgccatcagcttcgtgttggcagaaaagacaagtaacttgcgtgtcaagact
ctgaaggatctgatccatggagctcctgttgggaagccagctgcaaacagagcctttgtc
agtatggtgtaccaagaagataacggcgaggaacgctccttcacaagggccattattggt
tcgtcttctgagtatcgcatcaacagtaaggtggtggggttgcctgaatacagtgaggag
ctggaaaaacttggaattctgatcaaggctagaaacttccttgtctttcagggagctgtg
gagtctattgccatgaagaaccccaaagagcgtacagcactgtttgaagagatctcccgt
tctggagagttggcccaggagtatgatcggaggaagaaagagatggtgaaggcagaagaa
gacacacagttcaactatcatcgcaagaaaaacattgctgcagagcgaaaagaagccaaa
caagagaaagaggaggctgagcgttaccagcgtctcaaggatgaagtagccagggccagc
gtacagttacagcttttcaaattgtaccacaatgagacggagattgagaagctgaacaaa
gagctaggccagcggaacaaggagattgataaggaccgtaaaaagatggaccacgtggag
gaggagctgaaggacaagaagaaggagctgggcaggttgatgagagagcagcagaccatt
gaaaaagaaatcaaagagaaggactctgagttgaatcagaagaggcctcagtacatcaag
gccaaagagaacacttcacacaagatcaagaaacttgaggcagcacgtaaatcactgcag
aatgcccagaagatgtacaagaagcgcaagggggacatggatgagcttgataaggagatg
agggcagtagaattgactaagcaagagtttgaggaaagaatggaagaggaagcgcagagc
cagggccaggacctcactctggaagaaaatcaggttaagcaataccatcgtcttaaggag
gaggctagtaagcgtgctgccacgctggcacaggagctggagaagttcaaccgtgatcag
aaggctgaccaagatcgccttgacctggaggagagaaagaaagtggagacggaggccaaa
attaagcaaaagattcgtgaaattgaggaaaaccagaaacgtatagagaaattagaagat
tatatttccaccagcagacaatcacttgatgagcagaagcgcatggaggaggagctaacg
gaggaggtggagacggccaagaagaggattgacgagatcaacatggagctaaatcaggtc
atggaacagctgggagatgccagaattgacaggcaggagaacagtcgccagcagcgcaag
gcagagatcatggagagtattaaaagactttatcctggctctgtgtacgggcgtctgatc
gacctgtgccagcccactcagaagaagtatcagattgctgttaccaaagtgttgggcaaa
aacatggatgccatcattgttgactcagagaagactggcagagactgtattcaatacatc
aaggagcagagaggcgaacctgagacctttcttcctctcgactacctcgaggtgaaacca
acagatgaaaaactgagagaactgcgaggagccaagctggtgattgatgtgattcgctac
gaacccccccacatcaagaaagctctccagtatgcttgtggcaacgcgctggtgtgtgat
aacgtggaggatgcaaggaggattgcttttggagggccatacagacacaagacggttgcc
ctggacggtactctgttccagaagtccggagtcatctctggaggagccagtgaccttaaa
gccaaggccagacgctgggatgagaaggcagttgataagctaaaggagaaaaaagaaaaa
cttactgaagagcttaaggagcaaatgaaagcgaagaggaaggaggccgagttgcgtcag
gtgcagtcccaggcccacggtctgcagatgaggctcaaatactcccagagtgatttggag
cagacaaaaacacgacacctctccctcaacatgcaggagaagtccaaactagaaagcgaa
cttgcaaacttcggccctcgcatcaatgacatcaagaggatcatccactcccgtgagcga
gaaatcacagacctcagggaccggatgaatctggtggaggacgaagtgtttattgaattc
tgcaaggagattggagtgaggaacatcagagaattcgaggaagagaaagtgaagaggcag
aatgagattgcgaagaaacgtctggaatttgagacccagaagacccgtctgggcatacag
gtggactatgagaagaaccagctgaaggaggatcaagaaaaagtcatgatgtgggagcag
actgttaagaaagatgaggctgaaattgagcgacttaaaaaggaggagcacagacacatg
aaaatcattgacgagacaatggcccagctacaagacctgaagaaccaacacctaaccaag
aaatctgaagtcaatgataaaaatcatgacatggaggaaatccgcaaaaaactgggaggc
gccaacaaagagttgacccagctccagaaggaggtgactgccatcgagaccaaacttgag
cagaagcgtagtgaccgccacaacctgctgcaggcctgcaaaatgcaagatatcaggttg
ccgcttcgctctggaaccatggatgatatcagccagggagagggtagctcacaggcagat
gagtccagcagccagaggacatctagtactgttctggccaaagaagcgctcattgagatc
gactacagcagcctgtctgaagacctgaaggatgcgttgtcagaagaagagataaaggca
gagacgaatggattgcagcagcgtctaaatgagcagcagagcatcctgcagaggatcagt
gcacccaacatgaaggccatggaaaagcttgagagtgtcagggacaagttccaagagacc
agtgatgagtttgaagctgcccgtaagagagccaaaaaggccaagcaagcatttgagcaa
atcaagaaggagcggtttgatcgttttaatacctgttttgagtccgtggccaccaatatt
gatgagatttacaaggcgctctcacgcaacagcagtgcccaggcttttctgggcccggaa
aacccagaggaaccatatctggatggtatcaactacaactgtgtggctccagggaagagg
ttccgaccgatggataacttgtctggaggagaaaagactgttgctgctctggctctgcta
tttgcgatacacagctataaacctgcccccttcttcgtcctggatgagattgatgcagct
ctggacaacactaacattggcaaggtggcaaattacatcaaagaccagtcggagcagaac
ttccaggcgattgtcatttctctgaaggaggaattctacacaaaggcagattcactcata
ggtgtttacccagagcaaggagactgtgtcatcagtaaggtgctcacctttgacctctca
cagtatccagacgccaacccaaatccaaatgaataa
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