Cololabis saira (Pacific saury): 133457218
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Entry
133457218 CDS
T09849
Symbol
fip1l1b
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133457218 (fip1l1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133457218 (fip1l1b)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
133457218 (fip1l1b)
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Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
133457218
NCBI-ProteinID:
XP_061592249
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Position
1:9954674..9976668
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AA seq
602 aa
AA seq
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MSAEDADRTSADASAGDEEEEWLYGDESESKEEDEEAKLNAAVSGSANALTEDGGPASAA
AHATGNGVVSEATGEGTGEDVVSDSDSDDDDDDVHVTIGDIKTGAPQYTTYGTPPVNLNI
KSTGSRPYGQVAKLKGVDLDAPGNINGVGVLEVDMESFEEKPWRKPGADLSDYFNYGFNE
DTWKAYCEKQKRLRMGLEVSTIGSVTSKITVQQGRTGNEKDMCNLAVHTSKTDFTSPVNL
YKTVVSQVTSLAVPVRDARTEMTSWRSELTPNFSGKVSGTIDVIGGQMATISRVEGRRRP
NLEGNNIQVISEHTTSDSDPPPAVVAAAAVAASVPVPVPVPVPVPKLPTFFPPGPLPPNI
PPPPFLPPPPNVSTAPPLIPPPRLPITVPPPGFPPPTSGPPPSIIPTMDRSDTWDPTHVG
LMGGHPGGYDGRGVPPYPFPQGAYPPPLGGGVPPPWPPMMENPKSWDYYPRREDKRDKER
ERPRERTHEREREREHSPTAIGYTSEEERFRGYREYPERGYAERHRDRASREKEERHRER
RHREKEEGRHKSSRSSSSRRRHDSEEGDSHRRHKHKKSKRSKEGKEASEDMGGDQENQEA
ME
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcggaggacgcggacagaaccagcgctgacgccagcgccggagacgaggaggag
gaatggctgtacggagatgagtcggagagtaaagaggaggatgaagaggccaagctgaac
gctgctgtcagtggttctgcaaatgctttgacggaagatggtggtcctgcgtctgctgca
gcacacgctaccgggaatggagtcgtctctgaggccacaggtgaaggtacgggggaggac
gtggtcagcgactcggacagtgatgatgacgacgatgacgtccacgttaccatcggtgac
ataaaaaccggagcaccacaatacacgacttatggaacccctccggtgaacctcaacata
aagtcaacaggctccagaccttacggacaagtagcaaagttgaagggagttgatctggat
gcacctggaaacattaatggggttggcgtgctggaggtggacatggagtcctttgaggag
aaaccctggagaaagccaggagcggatctgtccgactacttcaactacggcttcaacgag
gacacctggaaggcttactgtgagaaacagaagaggctgcggatgggcctggaggtttct
acgatcggctcggtgacgagcaaaatcactgttcaacaaggcaggacgggtaacgaaaag
gacatgtgcaacttggctgtccacacctccaagacagacttcacgtctcctgtgaacttg
tacaagacggtcgtcagccaggtgaccagtctagctgtacctgtccgggatgcgcgcaca
gagatgacgtcatggaggtcagagttgacaccaaacttttctgggaaggtgagcggcacc
atcgacgtgatcgggggacagatggccacaatcagccgggtggaagggcgacgcagaccc
aatctagagggcaacaacatccaggtgatctccgagcacacgacttcggactcggaccca
ccacctgctgttgttgctgccgcggctgttgccgcttctgtcccggtgccggttccagtc
ccggtccccgtccccaagcttcccaccttcttcccccctggaccgcttcctccaaatatc
cccccacctccatttctccctcccccacccaacgtcagcacagcgcctccactcattccg
ccacccaggttgcccatcactgtccctcctcctgggtttcctcctccaacaagtggtcct
cctccgtctataatccccacgatggacaggtcagacacatgggaccccacccacgttgga
ctcatggggggccaccctggaggttacgatggccgcggcgtccctccgtatccattccct
caaggtgcttaccctccaccgctaggcggaggcgtacctcctccttggcccccgatgatg
gaaaaccccaagtcctgggactattatcctcgtcgagaggacaagagagacaaggagaga
gaacgacccagagagaggacacatgagcgggaacgagaacgagagcacagccctacagct
atcggctacaccagcgaggaggagcggttccgcggctaccgcgagtacccggagcgcggc
tacgcagagcgccatcgcgaccgcgcaagccgagagaaggaggagagacacagagagagg
cggcacagagagaaggaagagggacgccacaagtcgtctcgcagcagcagcagccggagg
aggcacgacagcgaggagggcgacagccaccggaggcacaaacacaaaaagagcaagagg
agcaaggagggcaaggaggccagtgaggacatgggtggagaccaggagaaccaggaggcc
atggagtag
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