Cololabis saira (Pacific saury): 133457225
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Entry
133457225 CDS
T09849
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a isoform X1
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
133457225 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133457225 (scn8aa)
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
133457225 (scn8aa)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
FraC
HpsJ
GPHH
Motif
Other DBs
NCBI-GeneID:
133457225
NCBI-ProteinID:
XP_061592214
LinkDB
All DBs
Position
12:complement(26232293..26290671)
Genome browser
AA seq
1964 aa
AA seq
DB search
MALPLLAPPGPDSFRKFKPESLVVLEQRIQEEKNKKPPKQDSSYRDDDDENKPKPNSDLE
AGKSLPYIYGDIPRGLVAVPLEDLDPYYVNSQKTFIVLNRGKTIFRFSATPALYFISPFN
LVRRIAIKILIHSLFSMIIMCTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKICA
RGFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPINFNDTNNSTKPFD
WDEYIMNDTNFYFLPGQLDALLCGNSSDSGRCPEGYMCMKAGRNPNYGYTSFDSFGWAFL
ALFRLMTQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQAT
MEEALQKEEEFKAMLEQLKKQQEDAQTAAMATSAGTVSEDAVEDDGGRLSCSSSEMSKLS
SKSAKERRNRKKKWRQKEQEKEKGDSEKFVKSESDDGSKRSRFRFPDNRLGRKSSIMNQS
LLSIPGSPFLSRHNSKSSIFSFKGRGKDVGSDNDFADDEHSTVEECDERRGSLFSPYRRN
SYSGFHGKRNSTVDCNGVVSLIGTGPGGRLLPEVKIDKAATDDSPTTEVEVKKKLSGSLM
VSVDQLNTSFGRKERANSVMSVITNTLVEELEGSQRKCPPCWYKFSNTFLIWECSPKWIK
FKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPDFEDMLSVGNLVFTGIFAGEML
FKLVAMDPYYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTL
NMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKIAQDCELPRWHMND
FFHSFLIVFRVLCGEWIETMWDCMEVAGQGMCLIVFMMVMVIGNLVVLNLFLALLLSSFS
ADNLAATDDDGEPNNLQISVMRIKIGIAWIKVRVRRLVANHLKKSPMEDEQKPLDDMYKE
KPNCIANHTGVDINRDLDYVKNGNGTTSGIGSSVGRYMIDEDHMSFIHNPNLTVCVPIAV
GESDFENLNTEDFSSESDIENSKELDDTSSSEGSTIDIKPDVEEVVLVETVEEYLDPEAC
WTDGCVAKYKCCQVDITFGWWKKWWFLRKTCYLIVEHNWFETLIIFMILLSSGALAFEDV
YIEQRKTIRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLV
ANALGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLI
FSIMGVNLFAGKYYYCFNQTSEEYFPVDVVNNKTQCVALINDNHTEVRWKNVKINFDNVG
AGYLALLQVATFKGWMDIMYAAVDSRQVEDQPIYEGNIYMYIYFVVFIIFGSFFTLNLFI
GVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKIQGMVFDFVT
QQVFDISIMILICLNMVTMMVETDDQSEETENVLYWVNFIFIFVFTTEFLLKLFALRHYY
FTNGWNIFDVVVVILSIVGMFLADLIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTL
LFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDLYNFETFGNSMIILFM
ITTSAGWDGLLLPILNYPPDCDPNLENPGTSVKGDCGNPSVGIFFFVMYIIISFLIVVNM
YIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPTASQFITFAKLSDFADALEHPLR
VPKPNTIELIAMDMPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRQQMEERFVAANPSK
VSYEPITTTLRRKQEDVSARIIQNAYRTHLIRRGIIFKRHPFANNKLENGGTNQEKKEST
PSTASLPSYDSVTKPDKEKQDKSKDDWAKKDKDKNQKDEWESKC
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atggctttaccccttcttgcaccgccaggacctgatagcttcaggaagtttaaaccagaa
tctttggtggtccttgagcagcgcattcaagaggagaagaacaagaagccacccaagcag
gacagcagctaccgtgacgacgatgacgagaacaagcccaaacccaacagtgacctggag
gctgggaagagtctgccctacatctatggggacatccctcgaggactggtggcggtacca
ctggaggatctggatccatactacgtgaatagtcagaaaacatttatagtgctaaataga
gggaagacaatcttccgctttagtgccacacctgccttgtacttcataagtcctttcaat
ctggttaggcgaatagctattaaaattttgatacattctcttttcagcatgatcattatg
tgtactattttgaccaactgtatattcatgacctttagtgatcctcccgagtggtcaaaa
caagtagagtacacattcacgggaatttatacgtttgagtctcttgtaaaaatctgtgca
cgtggattctgtatagacgggtttacattcctaagagatccatggaactggctggatttc
atggtcatttcaatggcatatataacagagtttgtggacctgggcaatgtatctgcgctg
agaacgttcagagttctccgagcattgaaaactatctctgtcattccaggcctgaagacc
atcgtcggtgctctgatccagtctgtgaagaagctttcggatgtcatgatcctgactgtg
ttctgcttgagtgtcttcgccctcatcggtctccagctcttcatggggaacctgcgccac
aagtgtgtgatctggccaatcaatttcaacgacactaataacagcaccaagccttttgac
tgggatgagtacatcatgaatgacaccaatttttacttcctgccaggccaattggatgct
ctgctttgtgggaatagctcagactctggccgctgcccggagggttacatgtgcatgaaa
gctgggaggaatccaaactacggctacaccagcttcgacagctttggctgggcattcctg
gctcttttccgactcatgacgcaggacttctgggaaaacctttatatgctgaccttgaga
gccgcgggaaagacatatatgatcttcttcgtcttggtgatcttcgtgggctcattctat
ttggtgaacctgatcttggctgtggtagccatggcctatgaagagcagaaccaggccacc
atggaagaggccctgcagaaagaggaagaattcaaggccatgctggagcagctcaaaaaa
cagcaagaggacgcccagactgctgccatggcaacatctgcaggaacagtgtcggaggat
gcggtggaggacgatggggggcgtctgtcttgcagttcctctgagatgtcaaagctcagc
tccaagagtgccaaagagcgccgcaaccgcaagaagaagtggcgacagaaagagcaggag
aaagagaagggtgacagtgagaagtttgtcaagtcagagtcggatgatggaagcaaaagg
agtcggttccggttccctgataatcgcttgggtcgaaagtcttctatcatgaaccagtcc
ctcctgagcatacctggctcgcctttcctctcccgccacaacagtaagagcagcatcttt
agtttcaagggccgcggtaaagatgtgggctcggacaatgactttgctgatgatgagcac
agcacagttgaggaatgcgatgaacgccgtggctccttgttcagcccctaccggcggaac
agctacagcggcttccacggaaagagaaacagcacggtggattgcaacggagtggtgtca
ctcatcggcactgggccgggtggacgccttctgcctgaggtgaaaatagataaggcagct
actgacgacagtccaactactgaggttgaggtgaagaagaagctgtcgggctccctgatg
gtgtctgtggaccagctcaatacctcctttgggcggaaagagcgggccaacagtgtcatg
agcgtcattaccaacacactagtggaggaactggagggatctcagcgcaagtgtccacca
tgctggtataagttttctaacacattcctgatctgggagtgctcccccaagtggattaag
ttcaaggagattgtaaacctgatagtcatggatcccttcgtggacttggccatcactatc
tgtattgtgctcaacaccctcttcatggccatggagcattaccccatgacccccgacttt
gaggatatgctgtctgtaggcaatctggtgttcactgggatctttgcaggagagatgctt
ttcaagcttgtggctatggatccatactactacttccaagaggcctggaactgttttgac
ggcttcattgtgacgctgagtttggtggagctggcgctggctgatgttgagggcctttct
gtgctgcggtcattccgattgctgagagtgtttaaacttgccaagtcatggcccaccctc
aacatgctgatcaagatcatcggtaactcagtaggagccttgggaaacctgactcttgtg
ctggccatcatcgtctttatatttgctgtggtgggcatgcagctgtttggaaagagctac
aaagactgtgtgtgtaagatcgctcaggactgcgagctaccccgctggcacatgaacgac
ttctttcactcgtttctgatcgtcttccgggtgctgtgcggcgagtggatcgagaccatg
tgggactgcatggaggtggcaggccagggaatgtgcctcatcgtcttcatgatggtcatg
gtcattggtaacctagtggtgttgaacctgtttcttgccttgttgctgagctcattcagc
gctgacaacttggctgcaacagacgatgacggtgaaccaaataatctacagatttctgtc
atgcgcatcaagatcggcatcgcgtggataaaggtacgagtgcgaagactggtggccaat
catttgaagaaatccccaatggaggatgagcagaagcctttggatgacatgtataaagag
aagcccaactgcattgctaatcacaccggggtggacattaatcgcgacctggactatgtc
aagaacggcaacggcacaaccagcggcattggcagcagcgttggaaggtacatgatcgac
gaggaccacatgtcattcatccacaacccaaacctgacggtgtgcgtgcccatagctgtg
ggggagtccgactttgagaacctcaacacagaagatttcagcagcgagtccgacattgag
aacagcaaagagctggacgacaccagttcttcagagggcagcaccattgacatcaagcca
gatgtggaagaggttgtgttggtggagacggtggaagagtacttggatccagaggcctgt
tggacagatggttgtgtggccaagtataagtgctgtcaagtggacatcacatttggctgg
tggaagaagtggtggttcctgagaaaaacctgctacttgatagtggaacacaactggttt
gagaccctcatcatcttcatgatccttctcagcagtggggccctggcctttgaggacgtt
tacatcgagcagaggaagaccattcgcatcattttggagtacgcagacagggttttcacc
tacatcttcatcttggagatgttgctcaaatgggtcgcctacggttttgtcaagtacttt
accaacgcctggtgctggctggacttcttcattgtggatgtgtctatagtcagccttgta
gctaatgcgctgggctactccgatctagggcccattaaatcactcaggacactaagggcc
ttgagacccctcagagccttgtcacgttttgaagggatgagggtggtagtcaacgccttg
gtgggtgccatcccttccattatgaatgtgttgctggtttgcctcatcttttggctgatt
ttcagtatcatgggggtcaacttgtttgcgggcaagtactactactgtttcaatcagaca
tcagaggagtactttcctgttgacgtggtcaacaacaagacccagtgtgtggcgctcatt
aacgataaccatactgaggtcaggtggaagaacgtcaagatcaactttgacaatgtgggc
gccggctacctcgccctgttgcaagtggccacattcaaaggctggatggacattatgtat
gccgctgtggattctagacaggttgaagatcagcccatttatgagggtaacatctacatg
tacatctactttgttgtcttcatcatatttgggtccttcttcaccctcaacctcttcatt
ggtgtcatcattgacaacttcaaccagcagaagaaaaagtttggaggtcaggacatcttc
atgacagaggaacagaagaagtactacaatgctatgaaaaagctgggctccaaaaagcca
caaaaacccattcctcgaccacagaacaagatccagggaatggtgtttgactttgtcacg
cagcaagtgtttgacatctccatcatgatactgatttgcctcaacatggtcaccatgatg
gtggaaacagatgaccagtcggaagaaacagaaaatgtcctttactgggtcaacttcatc
ttcatttttgttttcaccactgagtttttgttgaagctctttgccctgcgccactattac
ttcaccaatggatggaatatattcgatgtggtggtggtcatcctgtccattgttggtatg
tttcttgctgacctcattgagaagtactttgtgtcacccaccttgttcagggtgatcaga
ttggctcgtattggccgtatccttcgtctgatcaaaggagctaagggcatccgtacttta
ctctttgccctgatgatgtcactgccagctctattcaacatcggcctcctgctcttcctg
gttatgttcatcttctccatcttcggcatgtctaattttggctatgtaaaacacggagca
ggcatcgatgacctgtacaattttgagacctttggcaacagcatgatcatcctgttcatg
atcaccacgtcggctggctgggacggcttgctgctgccgatcctcaactacccaccagac
tgcgaccccaacttggagaaccctggtacatcagtgaaaggcgactgcggtaatccctca
gtaggaatctttttttttgtaatgtacatcatcatctccttcctgattgtggttaatatg
tacattgccatcattctggagaacttcagtgtggccacggaggaaagtgctgatccgctc
agtgaggacgactttgaaaccttctatgagatttgggaaaagtttgatcccactgcctct
cagtttatcacttttgctaagctgtctgactttgctgatgctttggagcacccgcttcgt
gtgccaaagcccaacactatagaactaattgccatggacatgcccatggtgagtggtgat
cgcattcactgcctggacatcttgttcgccttcaccaagcgtgtgctgggtgacagtggt
gagttggacatgctgaggcagcagatggaggagcggtttgtggcagccaacccttccaag
gtctcgtatgaacccatcaccaccaccctccgccgcaaacaggaggacgtctctgccaga
attatccagaatgcctaccgcactcatctcatcagacgcggcatcatcttcaagcgccac
ccttttgctaacaataagcttgaaaacggtgggaccaaccaggagaaaaaggagagcaca
ccatccacagcatctctcccatcatatgacagcgtgaccaaacctgacaaggagaagcag
gacaaaagcaaagacgactgggccaagaaagacaaggacaaaaaccaaaaagatgaatgg
gaatccaagtgttag
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integrated database retrieval system
