Cololabis saira (Pacific saury): 133457242
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Entry
133457242 CDS
T09849
Symbol
smc5
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133457242 (smc5)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
133457242 (smc5)
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Paralog
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_13
AAA_29
AAA_21
AAA_25
YfjB_N
Motif
Other DBs
NCBI-GeneID:
133457242
NCBI-ProteinID:
XP_061592251
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Position
12:26732235..26746377
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AA seq
1074 aa
AA seq
DB search
MSPPGKKQRLGQVSSNNSQHAPMSSPSTAGEDGEDGRYVEGSIRRITMKNFLTYDSSVVY
PGPNLNMIVGANGTGKSSIVCAICLCLAGKTNILGRGDKVGLYVKRGCQKGYVEIELYKN
GGYVVIKREIHVENNQSLWMLNNKLCNQKMVEEEVKSLCIQVNNLCQFLPQEKVGEFAKM
SKIELLEATEKSVGPPEMYEYHRELKNFRNKERDLENVVKEKASFLEKAKQRNERNKHDV
NRYYEKKRHLDVIELLEKKKPWVEYETIRKEREGVNKEREAAKKELSSLRQAQTPMLRKI
QQIDQQLKPTEAQMKAKTVAIKDASVKCKQKQDQLDRKHKEIDDIKQKFRLKQTEEEDHQ
KRIVNTRRAIEDLNTELAKVRDQPDVTPRINAVNLELRRIQEERAKIEGEKGDLRMEENK
FIAESRALERKLNDMNNLMNAKEEKLRGRYRDTHAALQWLRKNRDLFQGNVHEPMMLVMN
VKDHQLAKYVETHISIHDLRAFIFQRKDDMEKFMTEVRDKLNLRINSISAPEESWSRKKP
SRNIESLRRFGFYSYLREMFDAPEEVMSYLCYQYKVHDVPVGNEQTKAMIKTVIEEPYLK
VLYTSDDRYTVKRSFYSNKISTSNSAVHTSQYLGITVDAEEKRQLEEQIKECDSKLRAIG
ERRKALQNEAAVLERRDNELLAEKKSLSELKVKKRQLEQKIATKQDSLRQMEQSVIDLKK
IEEETKEKIAAVNLQKVTIVSAFMAQMKLRAKLTMEKAYLALETVGLTAEKTKLENDCRE
GASELKTLEQRCSRLDQRKAELTTQCHSLMKRAKTICRMQPDEQIPADLRNAFSKLPNTL
DEVDTMLNEERSRAECFTGLSENVVEEYQKREQEIKQLEKDLEEQTAALKAYRQNISEVK
ERWLNPLKQLVEQINEKFSHFFRSMQCAGEVDLHSENEEEYDKYGIRIRVKFHSSTQLHE
LTAHHQSGGERSVSTMLYLMALQELNRCPFRVVDEINQGMDPINERRVFDIVVRTACKTT
TSQYFFITPKLLQNLQYAEEMTVLCVHNGPHMSPPEEWDMAAFLRRRQRRKPRA
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtccccacccgggaaaaaacagcgactcggccaagtcagcagtaacaactcacaacat
gctcctatgagctccccaagcacggccggagaagacggagaagatggtcgttatgtggaa
ggctccatacgtcgcatcaccatgaaaaacttcctgacctatgactcttcggtggtgtat
cctggaccaaatttgaacatgatcgttggagccaatggaactggcaaatctagcattgtg
tgtgccatttgtctgtgtctagctggcaagaccaatattttgggaagaggagacaaggtt
gggctctatgtgaaacgtggatgtcaaaaaggctatgttgagatagaactgtacaagaat
ggcggttatgtggtaattaaaagagagatccatgtggagaacaatcagtcactttggatg
ctaaataacaaactctgcaaccagaaaatggtggaagaggaggtcaaaagtttgtgtatc
caagtcaacaatttgtgccagtttctacctcaggaaaaagtgggtgagtttgccaagatg
tccaaaattgagctgctggaggcaactgagaagtcggttggaccaccagagatgtacgag
taccaccgtgagctcaaaaacttccgcaacaaagagcgagatttagagaatgttgtgaaa
gagaaggcaagctttctggagaaggcaaagcagaggaatgagaggaacaagcatgacgta
aatcgttattacgaaaaaaagagacatctggatgtgattgagttgcttgagaagaagaaa
ccatgggtggaatatgagaccatccgtaaggagcgtgagggcgtaaataaggagcgtgaa
gcagccaaaaaggagctctccagtcttaggcaagcccagacacccatgctgaggaaaatc
cagcagattgatcagcagttgaagccaactgaggcacaaatgaaggctaagacagttgcc
atcaaagatgcatctgtgaagtgcaagcagaaacaagatcagttggatagaaaacacaaa
gagattgatgacatcaagcaaaagtttaggttgaagcagacggaggaggaagaccatcag
aagcgaatcgtcaacactagacgagccattgaagacctgaatactgaacttgccaaagtc
agagatcagccagatgtaactccaagaatcaatgctgttaacctggagttgaggcgcatc
caggaggagagagccaagatcgaaggggagaagggtgacttgcgcatggaggagaacaaa
ttcattgctgagtccagagccttggaaaggaagctcaatgacatgaataacctgatgaat
gccaaggaggagaagctgcgaggacggtaccgtgacacacatgctgctctccagtggctg
agaaagaacagagacctctttcaggggaacgtccatgagcccatgatgctggtgatgaat
gtgaaagatcatcaattggcaaagtatgtggaaacccatatctcaatccatgacctgcga
gcttttatcttccaaaggaaagacgacatggagaagttcatgaccgaggtccgtgacaag
ttgaacttgagaattaattcaatttctgccccagaggagtcatggtcaaggaagaaacca
tcccgaaatattgagtctctcaggcgctttggattctactcttatctccgtgaaatgttt
gatgctcctgaggaggtgatgagttacctctgttatcagtacaaggtgcatgatgtgcct
gtgggcaatgagcaaacaaaagccatgataaaaacggtgattgaggagccctacctgaag
gtgttgtacacatcagatgacaggtacaccgtaaaaaggtccttttattccaataagata
agcaccagtaactctgcagtgcatacatcccagtacctcggcatcactgtggatgctgag
gagaaacggcagctggaggagcaaattaaagagtgtgattcaaagttacgagccattggt
gaacgaaggaaagccctgcagaacgaagctgctgtactggaacgccgggacaacgagttg
ttagcagaaaagaaaagtctctctgaactaaaagtaaaaaagaggcaactggagcagaaa
attgcaactaaacaagacagtttgaggcagatggagcagagtgttattgacctgaagaag
attgaggaggaaactaaagagaagattgcagctgtcaacttgcagaaagtgaccatcgtc
tctgcattcatggcccaaatgaagctaagagccaagctgacgatggagaaggcgtatctg
gccttggagacagttgggttgacagcagagaagactaagctggagaatgactgtagggaa
ggcgcctctgagctaaagactttggaacaaaggtgcagtcgtctggatcaaaggaaggct
gagctgacaacgcaatgccatagcctaatgaagagggcaaagacgatttgtaggatgcaa
cctgatgagcaaatacccgcagacctgcgtaatgctttcagtaaactgcctaacacgctg
gacgaggtcgataccatgctgaacgaggagcggtccagagccgagtgcttcactggcctc
agtgaaaatgttgtggaagagtaccaaaagagagaacaggagatcaaacagctagagaaa
gatcttgaagaacaaactgctgctctgaaggcctacagacagaacatatcagaggtgaag
gaacgctggttgaaccctctgaagcagctggttgaacagataaatgaaaaattcagtcat
ttctttcgctccatgcaatgtgcaggagaagttgatcttcactcagaaaatgaggaggag
tatgacaagtatgggatccgtatccgggtgaagttccacagcagcactcagctccatgag
ctgactgctcaccatcagagtggaggagagcgcagcgtctccacgatgctttacctcatg
gccttgcaggagctcaaccgctgcccgtttagggtggtagatgagatcaaccagggaatg
gatccaataaatgagaggagagtatttgacattgtggtccgcacagcttgcaaaacaaca
acttctcagtacttcttcataactccaaaacttctgcagaatcttcagtatgctgaggag
atgacagtcctttgtgtccataacggtcctcacatgagtcccccggaagaatgggacatg
gcggctttcctcagaaggcgtcaacgaagaaaacccagggcataa
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