Cololabis saira (Pacific saury): 133457255
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Entry
133457255 CDS
T09849
Symbol
sort1b
Name
(RefSeq) sortilin 1b
KO
K12388
sortilin
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133457255 (sort1b)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
133457255
NCBI-ProteinID:
XP_061592277
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Position
12:complement(27097918..27111449)
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AA seq
815 aa
AA seq
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MMGLLLRGVLLLSACTFTASVDFHLGSEALGNQPVFVRRRSPAERPATRLGGRKRRATEQ
DGDESCKGLQGSQTKLADNTHPYAFNDLSGSVSLAWVGDGRGVILALTTFQVPFFMLRLG
QSKLYRSENYGKSFQDVTSLINNTFIRSEFGIAIGPENSGKVILTGEVSGGQESRIFVSG
DFGKSFTHRDLPFIPMMQITYDPDSSNVLVALSSSNELWLSEDFGSNWRKVENMVCLVKW
GRRNTIFFTTSRNGSCSDRGMLELKRTTDYGKTSKTVANKIFSFGLGGRFLFASVMTGQG
TLRMIHVSVDHGETWNMAQLPPVGHEQFYSILAANDEMVFMHVDEPGDTGFGTIYVSDDR
GTVYSKSLERHLYTTTGGDTDFTNITSLRGVFVTSILAEDKSVQSVVSFDQGGEWVPLRK
PANTKCDATAKDPDKCNLHIHAAYSIAMKLTVPMPPLTEPNAVGLILAHGSVGDAISVMR
PDVYVSDDGGYTWIKALDGPHHYAILDSGGLLVAVEHSPTQPISKIKFSTDEGQCWGVYT
FTEDPIFFTGLASEPGARSMNVSIWGYRESFLSEYWISFTIDFRELLTRDCDDEDYVQWL
AHSDDISDPNDGCMLGYKEKFLRLRKDSVCWNGRDYEITKQPTLCPCTLDDFLCDFGFYR
KENSSECVEQPDLKGKVLEFCLNGKEEQLQTSGYRKIPGDKCEGGKMPERKEIDLSKRCV
SDLVGPDLLVGQQSSKSVPVVVTVVIFVMLLSSAAGVVFVRKYVCGGRFLVHRYSVLQQH
VEDNATDEMDDALESNHTQNGKIEFHDDSDEDLLE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgatgggacttttgctgcgcggcgtcctgctgctctccgcctgcactttcaccgccagc
gtagattttcatctgggatctgaagcgctcggaaaccagccggtttttgtgagacgccgg
agccctgcggagagaccggccaccaggctcggggggagaaaacggagagccaccgagcag
gatggggatgagtcgtgcaaagggcttcagggatcccaaaccaagttagcagacaacacc
cacccgtatgcctttaatgacctgagcgggtcggtgtcgcttgcctgggttggagatggc
agaggggttattctggctttgacgacttttcaggtgcccttcttcatgctgagactggga
cagtccaaactctatcgtagtgagaactacgggaagtccttccaggatgtgaccagctta
atcaacaacaccttcatcagatcagagtttggtatcgcaatcggcccagagaactcgggg
aaagttatcctaacaggggaagtatctggaggtcaggagtctcggatttttgtctctgga
gactttggaaagagtttcacccaccgggacttgcctttcatccccatgatgcagatcaca
tatgatcctgacagttcaaatgtgcttgttgccctcagcagcagtaatgaactgtggctc
tctgaggattttggcagtaactggagaaaggtcgagaacatggtgtgtttggtgaaatgg
ggtaggagaaataccatcttctttacaaccagcaggaatggatcctgcagtgatcgagga
atgttggagctgaaaaggacaacggactacggcaaaacctccaagactgtcgccaataaa
atcttctcttttggtctgggtggacgtttcctctttgcctctgtaatgacgggacagggc
acactgaggatgattcacgtgtcggtggaccatggtgagacttggaacatggcccagctg
ccgcctgttggccacgagcagttctactccattttggcagcgaacgatgagatggtcttc
atgcatgttgatgagcctggagatactggatttggtaccatttatgtttcggatgaccgg
ggcacggtctactccaagtcactggagcgtcacctttacaccaccacggggggtgacaca
gacttcaccaacatcacctccctacgaggggttttcgtcaccagcattctggccgaagat
aagtccgtgcagtcggtggtgtcctttgatcagggaggggagtgggtccccttgaggaaa
cctgccaacaccaagtgcgatgctacagccaaggacccggacaagtgcaatctgcacatc
cacgccgcttacagcatcgctatgaagctgaccgtccccatgccgcctctgacggagcca
aatgccgtgggtctcatcctggctcatggcagtgttggggacgccatctccgtgatgcga
cctgatgtgtacgtgtctgatgatgggggttacacctggataaaggcacttgatggaccc
catcactatgccattctggactcaggggggctcctggtggccgtggagcacagcccgacc
cagcccatcagcaagatcaaattttccactgatgaaggacagtgctggggtgtgtacacc
ttcactgaagatcccatcttcttcactggactggcatcggagccgggagctcgatctatg
aacgtgagcatctggggctacagagaatccttcctcagcgagtactggatctctttcacc
attgacttcagggagcttctcaccagagattgcgatgacgaggactatgtgcagtggttg
gcccactctgatgacatcagcgacccaaacgacggctgcatgctgggttacaaagagaaa
ttcctgcggctcagaaaggactccgtttgctggaatggacgggattacgaaatcaccaaa
cagccgaccctgtgcccgtgcaccctggacgactttttgtgtgactttggattctaccgc
aaagagaacagctctgaatgtgtggagcagccggacctgaagggcaaagtgctggagttc
tgtctgaacggaaaagaggagcagctgcagaccagcggatatagaaaaatccctggagat
aaatgtgaaggagggaagatgcccgagcgtaaagagatcgacctcagtaagaggtgtgtc
agtgacctggtgggcccagaccttctggtaggtcagcagtcctcaaagtctgtgcccgtc
gtagtgacggtcgtcatcttcgtcatgctgctgagtagcgcagcaggagtcgtctttgtt
aggaaatatgtctgtggtggcaggtttttggttcacagatactcggtgctgcagcagcat
gttgaggacaacgccactgacgagatggacgacgcgctggagagcaaccacacacaaaac
ggcaaaatagagtttcacgatgactctgatgaggatctgcttgaatag
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