Cololabis saira (Pacific saury): 133457290
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Entry
133457290 CDS
T09849
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04120
Ubiquitin mediated proteolysis
csai04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133457290 (ube4b)
04120 Ubiquitin mediated proteolysis
133457290 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133457290 (ube4b)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133457290 (ube4b)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
U-box type E3
133457290 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
133457290
NCBI-ProteinID:
XP_061592344
LinkDB
All DBs
Position
12:28050087..28072313
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AA seq
1377 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPFSTPLTSPQRETPPGPLPGPSGVALQAVPPAG
AQSLGFNVHSGTPATSPMGISGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
PASCEKSMSQVDVDSGIENMEVEDSDRREKRNLSEKETCSNSDVSEEQALQLICKILRVS
WKEQDRDVIFLPSLAGEFQQNPKDVFSDFKDLIGQILMEVLMMSSQSCVHNPFASLTATS
QPIAAKSSEHHLTLVQPSSQGGSPMGPSAGSFGASSLSSLYGCSTPHPMALDAAKRTCTC
LSTPTTSTVPSTPPTPSFVVPSSSPTTTTPRQFLNPPSAPMPISQRYRPYSVTSPFGATS
PLTPGLRGFSFPCPTPAGSSVPPNTPVPVQPVSPQSLSLSSPRAHNQPSSTTSPVVPPSP
RLNAQQATFGTRIPPSSPLSFLFFALSDMSQDNSDEDSGEEEDFSQVQFGSSLGACGGGI
PSDSASDRFTIEACKETEMLNYLIERFDSVGMEERKAPKMCSQPNISQLLSNIRSQCISH
VALVLQGTLTQPRSPLHQSLLVPYLLCRNLPYGFIQELVRITHQEEEVFKQIFIPILHGL
ALAVKECSFDSDNFKFPLMALAELCEIKFGKTHPVCNLVTSLPLWCPKPLSPGCGREVQR
LSYLGAFFSLSVFAEDDTKVGDKYFSGPAITMENTRVVSQSLQHYLESARSDMFKVLHNI
LLNGETRELALTCMAGLVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKLETVD
PFYIFHPRCRIVVSLEETRVKATMEELKSWLTELHEDPTKFSEPKFPTECFFLTLHTHHL
SILPGCRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRAK
ACADVGLLDENLLRRCLQFYSTVIQLILRMVDPAYPNITLPLNPEIPKSFAALPEFYIED
VAEFLLFVVQYSPQVLYEPCIGDIVTFLVVFICNQSYIRNPYLIAKLVEVLFVTNPAVQP
RTQRFSEMMENHPLSVKHLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNI
AHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRE
QQQSRQSQLTQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQ
LCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEVI
SKMRKAGIKSSIAIEKFKLLSEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMNDPVML
PSGNVMDRAIILRHLLNSSTDPFNRQPLTESMLEPVPELKERIHAWMREKQGGGRLL
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttaagcgcagatgagattcgtagaaggcggctggcacgactggcaggagga
cagacatcacaacccagcacccctttcagcacacccctgacctccccacagagagagact
ccacctggacccctccctggaccctcaggtgtcgctctccaagctgtgccaccagctggc
gctcagtcattggggttcaatgtccacagtggtacccctgccacgtcccccatgggcatc
tctggagtggcatatggcagtcaaagcagcgagggtgtgagttcgctctccagctccccc
tccaacagccttgaaactcagtcccagagtttgtcccgatcgcagagcatggatattgac
ccggcctcctgtgaaaagagcatgtcccaggtggacgtggactcagggatagagaacatg
gaggtggaggacagtgatcgcagggagaaaaggaacttgtctgaaaaggaaacctgttca
aactcggatgtctctgaagaacaggctctgcagctcatctgtaagatcctccgtgtatcg
tggaaggagcaggatagagatgtcatctttctcccttccctggccggagagtttcagcag
aaccctaaagatgtattttctgacttcaaagacctgatcggccagatactgatggaagtc
ttaatgatgtcatcccagtcatgtgtccacaacccgtttgccagcttgactgccacctca
cagccaattgcagcaaaatcgtctgagcaccatctgacgctggtgcagccctctagccaa
ggtggcagtccaatgggccccagtgctgggtcctttggtgccagctctctgtcaagtctt
tatggctgcagcactcctcacccaatggctttggatgcagccaagaggacttgcacatgt
ctctccacacccacaacatccacagtaccttctacacctcctactccatcatttgttgtt
ccctcgagttcacccactaccaccactccgaggcaattcctcaacccgccatctgccccc
atgcccatctctcagcggtatcgaccgtactctgtcaccagtccctttggagccacttcc
ccacttaccccaggtctcagaggatttagtttcccatgtcccactccagctgggtcctct
gttcctcccaacaccccagttcctgtgcagccagtttccccccagtccctctccttgagt
tcacctagggctcacaaccagccttcctccacaacgtctcctgttgtgcctccttctccg
agattgaatgctcaacaggctacctttggtacccggatcccaccatctagccccttgtcg
ttcctgttttttgccctttctgatatgtctcaggacaacagtgatgaagattctggggag
gaggaagatttttcacaggttcagttcgggtccagtcttggtgcatgtggaggaggaata
cccagcgattcagccagcgatcgcttcaccatcgaagcatgcaaagagacagagatgctg
aactacctcattgagcgttttgacagtgttggcatggaggagaggaaagctcccaagatg
tgtagccaaccaaacatcagccagcttctcagtaacattcgctctcagtgtatctctcat
gtcgccctagttctgcagggcaccctgacccagcctcggagccccctccaccagtctctg
ctggtaccttatctgctgtgtcggaaccttccatatggctttattcaagagcttgtgcgc
attacccatcaggaagaagaagtgttcaaacagatcttcattcccatcctccatgggctt
gcacttgcagtgaaggaatgttcctttgacagtgacaattttaaattccccctcatggca
ttagctgaactttgtgaaattaagtttggaaagacccaccctgtgtgcaatttggtaaca
tcgctgcctctttggtgtcccaaacctctaagtcctggttgtggcagagaagtccagaga
ctgtcctaccttggggcgttctttagcctctcagtgtttgctgaagatgatactaaagta
ggagacaagtatttctctgggccagccatcaccatggagaacacgcgagtggtcagccaa
tctttgcagcactacctggagtcagcaaggtctgacatgttcaaggttctccacaacatc
ctgctaaatggagaaacgcgcgagttagcccttacctgcatggcaggtttagtcaactac
aatgtgaagaaagcccagatgcagaccgacgacaagctggtgtctacagatggcttcatg
ctcaactttttatgggtgctgcagcagcttagtatgaagatcaagctggaaacggttgac
ccgttctacattttccatccacggtgccgcattgtcgtcagcctggaagagactcgtgtc
aaagctaccatggaagagctcaaaagctggttaaccgaactgcacgaagaccccactaag
ttctcagaacccaagttccccaccgagtgcttcttcttgacgcttcacacccaccatttg
tccatcctgcctggctgcagacgctacatccgcagattgcgggccatccgtgaactcaac
agaactgtagaggagctgaaaaacagtgagagccaatggaaagattctcccctggcaagt
cgccacagagaaatgctcaaacgatgcaaaactcagctcaagaaactagtgcgagccaaa
gcttgcgctgacgtgggccttctggatgagaacctgctccgcagatgtctgcagttttac
agcaccgtcatccagctcattcttcgcatggtggaccctgcctaccccaacattacccta
ccattgaaccctgagattcccaaaagctttgctgctctgcctgagttttacattgaggat
gtggcagagtttctgctttttgttgtgcagtactccccacaggttttgtatgagccgtgc
attggggacattgtcacattcttggtggtgttcatctgcaatcagagctacatcaggaac
ccttaccttatcgccaagttggtggaggtgttgtttgtcaccaatcctgctgtacagcct
cgaactcagcgattctcagaaatgatggagaaccacccattgtctgtcaaacacctggtc
cctgctctcatgaagttctacacagatgttgagcacactggtgctaccagcgagttctat
gataaattcactatacggtaccatatcagcaccatcttcaagagtctctggcagaatatt
gctcatcatggcaccttcatggaggagttcaactctggcaagcagtttgtgcgttacatc
aacatgctgattaacgacaccaccttcttgctggatgagagccttgagtccctgaagcgt
atccacgaagttcaagaggagatgaagaataaggagcagtgggatcagctgcccagggag
cagcagcagagccgccagtcccagctgactcaggatgagcgggtgtctcgctcctatctg
gccctggctacggaaacggttgaaatgttccacatcctcactaagcaggttcagaagcct
ttcctcaggcctgagctcgggcctcgtttagctgctatgctgaactttaaccttcagcag
ctctgtgggcccaaatgccgggacctaaaggtggaaaaccctgaaaagtatggctttgag
cctaagaagcttttagaccagctgactgacatctacctgcagctagattgtgcccgcttt
gctaaagcaattgcagatgatcagcggtcatacagtcgtgaattgtttgaggaagtgatc
tcaaagatgaggaaagctggtattaagtcttctatcgccattgaaaaattcaagctgcta
tccgagaaggtggaagaaatagtcgccaagaactcccagtctgaaatggactacagtgat
gcaccggatgagttcaaagaccctctgatggacacacttatgaatgaccctgttatgctg
ccctctggaaatgtcatggacagagccatcatcttgcgccacctgctcaactcctccact
gacccattcaacaggcaaccactcacagagagcatgctagagccagtgcctgaactgaag
gagaggatccatgcttggatgagagagaagcagggaggagggcggcttctctaa
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integrated database retrieval system
