KEGG   Cololabis saira (Pacific saury): 133457302
Entry
133457302         CDS       T09849                                 
Symbol
exosc10
Name
(RefSeq) exosome component 10
  KO
K12591  exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
csai  Cololabis saira (Pacific saury)
Pathway
csai03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:csai00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    133457302 (exosc10)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csai03019]
    133457302 (exosc10)
Messenger RNA biogenesis [BR:csai03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     133457302 (exosc10)
SSDB
Motif
Pfam: DNA_pol_A_exo1 PMC2NT HRDC Lipase
Other DBs
NCBI-GeneID: 133457302
NCBI-ProteinID: XP_061592397
LinkDB
Position
12:complement(28509196..28522944)
AA seq 891 aa
MSSSKSNNSAKSAVADGNSDANDEDKNELCPGFKDADAFVKHGLGAVLSATKESSGLPQT
GDEYDFYRSFPGFQEFCDSQGDQILHCMSQIMQYHGCRSHIRDQNKLTGVEERFDLVVDS
NDVILERAGILLDEADGVNRGQKPVMPVGFQPPKIVVSSWNRKGLGSGSRSETFRLLHAK
NIARPQLKFKEKIDNSNTPFTPKIFIKPNAVKPLPSYFTNQQIRKERPEDLDVPAALADF
IHQQRTKEYVEDMFAHPYQYELDHSTIAESLLSKPEPQMYKPVEETKLSFVDTLEDLVAL
NEKLCKLPEFAVDLEHHSYRSFLGLTSLMQISTREEDYIIDTLELRSEMYILNEAFTDPA
IVKVFHGADSDIEWLQRDFGLYVVNLFDTHQASRALNLARHSLDHLLKHFCKVESDKRYQ
LADWRIRPLPEEMVQYARTDTHYLLYIYDCVRVQLLDVNHGQHGLIQRVWNKSREISLKK
YVKPIFTEESYLQLQRKQKKSFNTQQLTAFRLLFAWRDKLARMEDESTGYVLPTHMMSKI
SEELPREPQGIIACCNPVPPMVRQQVNELHLLVQQAREMPLLKAEVAAQNKKGFTPIKKT
EVTLFGPHDTSKTSESDLPHFPPNEVPVKQGALFSEDEPKTDDDELKGSDLLAQAKITVF
QEPETQDEQKSMSVSQMKARRIIESFENPFRMYLPSTNVRVNKNAKFDPSSKIFEISKRW
KLQSIEQQQKEQETKRKSKEARQQAKKVKEQRTKAKQSYQESLQNVATVRQQAAESAKAD
GKKREQASSPVGEVTPKPSKKLMKAAETPQKTEAPPQESFKPFDYSKSDLKVFAGNKSKD
GTQFDPNRQTGNFKKKKTPQGQKSNFAAGNKSMSYMAGKSERGFRHNWPKR
NT seq 2676 nt   +upstreamnt  +downstreamnt
atgagttcttctaaaagtaataattccgctaaaagtgctgttgcggatggcaattcagat
gctaacgacgaagataaaaacgagctgtgtcccggtttcaaagacgcggatgccttcgtt
aaacatggattgggtgctgtgttgtcagcaaccaaagagtcctccggcttacctcagact
ggagatgaatatgacttctatcggagcttcccaggctttcaggagttctgtgacagtcag
ggagatcagattttgcactgcatgagtcagataatgcagtaccacggctgcagatctcac
atcagagaccagaacaagctcacaggggtggaggagaggtttgatctggttgtggactcg
aatgacgttatccttgaaagagcggggattcttcttgatgaagccgatggagtgaacagg
ggccagaagcccgtcatgcctgttgggtttcagcctcccaaaattgttgtttccagctgg
aatcgcaagggtctcggctccggcagtcgttctgagacattcagactgctccacgccaag
aacatagcaaggcctcagctgaaattcaaggaaaaaattgacaacagcaacacacctttt
actcccaaaatcttcataaaacccaatgcagtaaagccactcccatcttatttcactaac
caacaaatacgtaaagagaggccagaggacctggatgtcccagctgcccttgctgacttt
attcaccagcaaagaactaaggaatatgttgaagacatgtttgctcacccataccaatat
gagctggaccacagcacgatagcagaaagccttctgtccaaaccagagcctcagatgtac
aaaccagtggaggagaccaagctgtcctttgttgacacactagaggacctagtggctctg
aatgagaagctctgcaaactgcctgaatttgcagtagaccttgagcaccattcctacagg
agtttccttggcctcacctctctgatgcagatctccaccagagaagaggactacattatc
gacacactcgagctacgcagcgagatgtacatcctgaatgaggcgttcactgatccagct
attgtaaaggtgtttcatggtgctgattctgatattgagtggctccagagagactttggc
ttgtacgttgtcaacctttttgacacgcatcaggcgagccgtgccctcaacctcgccaga
cattccctcgaccacttgctcaaacacttctgcaaggtggagtcggacaaacgctaccag
ctagctgattggaggattcggcctttgccagaggagatggtgcagtatgcccggacagac
acccactacctactttatatctacgactgtgtgagggtgcagcttctggatgtcaatcat
ggacaacatggcctcatacagcgtgtttggaacaagtccagagaaatttccttgaagaaa
tacgtgaagcctattttcacagaggagtcatatttgcagctgcagaggaagcagaaaaag
tcttttaacacccagcagctcactgccttcagactgctgtttgcctggagggacaagctg
gccaggatggaagatgaaagcaccggatatgtcctgcccacacatatgatgagcaaaata
tcagaggaactgcctcgagagcctcagggtatcattgcctgctgcaaccctgtaccacca
atggtgaggcagcaggttaatgagctacatctgttggtgcagcaagccagggaaatgccc
ctcctgaaggctgaggttgcagctcaaaataaaaaaggattcacacccattaaaaagaca
gaagtaacattgtttggtccacatgatacatccaagactagtgaaagtgatcttccgcat
ttcccacccaacgaagtgcccgtgaaacaaggggcccttttctcagaggatgagccaaag
acggacgacgatgagctgaaaggaagcgatcttttagcacaagctaaaatcacagtgttt
caggagcccgaaacgcaggatgaacaaaagtcaatgtcggtgtctcagatgaaagccaga
cgtatcattgagtcttttgaaaaccctttcagaatgtatttaccctccactaatgtccgt
gtcaacaagaatgccaagtttgacccctcttcaaaaatatttgagattagcaaaagatgg
aaacttcagagtattgaacagcaacagaaggaacaggagacaaagagaaagtccaaagaa
gcgaggcaacaagcaaagaaagtaaaagagcaaagaaccaaggctaaacaaagctatcag
gagtctctacagaatgtcgccacagtgcgccagcaagcagcggaatcagcaaaagctgat
ggaaagaaaagagagcaggcttccagtccggttggagaggtgactcccaaaccaagcaag
aaactgatgaaagcggcagagacgccccagaaaacagaagctcctccccaagaaagcttc
aagcccttcgactacagcaagtcagacctcaaagtctttgctggtaacaaatcgaaagat
ggcacacagtttgatccaaaccggcaaaccggtaattttaagaaaaagaaaactccccag
ggacaaaagagcaactttgcagctggaaacaaaagtatgtcatacatggctggcaaatca
gagagaggatttcgccataactggccgaagagatag

DBGET integrated database retrieval system