Cololabis saira (Pacific saury): 133457302
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Entry
133457302 CDS
T09849
Symbol
exosc10
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133457302 (exosc10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133457302 (exosc10)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
133457302 (exosc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
Lipase
Motif
Other DBs
NCBI-GeneID:
133457302
NCBI-ProteinID:
XP_061592397
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Position
12:complement(28509196..28522944)
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AA seq
891 aa
AA seq
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MSSSKSNNSAKSAVADGNSDANDEDKNELCPGFKDADAFVKHGLGAVLSATKESSGLPQT
GDEYDFYRSFPGFQEFCDSQGDQILHCMSQIMQYHGCRSHIRDQNKLTGVEERFDLVVDS
NDVILERAGILLDEADGVNRGQKPVMPVGFQPPKIVVSSWNRKGLGSGSRSETFRLLHAK
NIARPQLKFKEKIDNSNTPFTPKIFIKPNAVKPLPSYFTNQQIRKERPEDLDVPAALADF
IHQQRTKEYVEDMFAHPYQYELDHSTIAESLLSKPEPQMYKPVEETKLSFVDTLEDLVAL
NEKLCKLPEFAVDLEHHSYRSFLGLTSLMQISTREEDYIIDTLELRSEMYILNEAFTDPA
IVKVFHGADSDIEWLQRDFGLYVVNLFDTHQASRALNLARHSLDHLLKHFCKVESDKRYQ
LADWRIRPLPEEMVQYARTDTHYLLYIYDCVRVQLLDVNHGQHGLIQRVWNKSREISLKK
YVKPIFTEESYLQLQRKQKKSFNTQQLTAFRLLFAWRDKLARMEDESTGYVLPTHMMSKI
SEELPREPQGIIACCNPVPPMVRQQVNELHLLVQQAREMPLLKAEVAAQNKKGFTPIKKT
EVTLFGPHDTSKTSESDLPHFPPNEVPVKQGALFSEDEPKTDDDELKGSDLLAQAKITVF
QEPETQDEQKSMSVSQMKARRIIESFENPFRMYLPSTNVRVNKNAKFDPSSKIFEISKRW
KLQSIEQQQKEQETKRKSKEARQQAKKVKEQRTKAKQSYQESLQNVATVRQQAAESAKAD
GKKREQASSPVGEVTPKPSKKLMKAAETPQKTEAPPQESFKPFDYSKSDLKVFAGNKSKD
GTQFDPNRQTGNFKKKKTPQGQKSNFAAGNKSMSYMAGKSERGFRHNWPKR
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgagttcttctaaaagtaataattccgctaaaagtgctgttgcggatggcaattcagat
gctaacgacgaagataaaaacgagctgtgtcccggtttcaaagacgcggatgccttcgtt
aaacatggattgggtgctgtgttgtcagcaaccaaagagtcctccggcttacctcagact
ggagatgaatatgacttctatcggagcttcccaggctttcaggagttctgtgacagtcag
ggagatcagattttgcactgcatgagtcagataatgcagtaccacggctgcagatctcac
atcagagaccagaacaagctcacaggggtggaggagaggtttgatctggttgtggactcg
aatgacgttatccttgaaagagcggggattcttcttgatgaagccgatggagtgaacagg
ggccagaagcccgtcatgcctgttgggtttcagcctcccaaaattgttgtttccagctgg
aatcgcaagggtctcggctccggcagtcgttctgagacattcagactgctccacgccaag
aacatagcaaggcctcagctgaaattcaaggaaaaaattgacaacagcaacacacctttt
actcccaaaatcttcataaaacccaatgcagtaaagccactcccatcttatttcactaac
caacaaatacgtaaagagaggccagaggacctggatgtcccagctgcccttgctgacttt
attcaccagcaaagaactaaggaatatgttgaagacatgtttgctcacccataccaatat
gagctggaccacagcacgatagcagaaagccttctgtccaaaccagagcctcagatgtac
aaaccagtggaggagaccaagctgtcctttgttgacacactagaggacctagtggctctg
aatgagaagctctgcaaactgcctgaatttgcagtagaccttgagcaccattcctacagg
agtttccttggcctcacctctctgatgcagatctccaccagagaagaggactacattatc
gacacactcgagctacgcagcgagatgtacatcctgaatgaggcgttcactgatccagct
attgtaaaggtgtttcatggtgctgattctgatattgagtggctccagagagactttggc
ttgtacgttgtcaacctttttgacacgcatcaggcgagccgtgccctcaacctcgccaga
cattccctcgaccacttgctcaaacacttctgcaaggtggagtcggacaaacgctaccag
ctagctgattggaggattcggcctttgccagaggagatggtgcagtatgcccggacagac
acccactacctactttatatctacgactgtgtgagggtgcagcttctggatgtcaatcat
ggacaacatggcctcatacagcgtgtttggaacaagtccagagaaatttccttgaagaaa
tacgtgaagcctattttcacagaggagtcatatttgcagctgcagaggaagcagaaaaag
tcttttaacacccagcagctcactgccttcagactgctgtttgcctggagggacaagctg
gccaggatggaagatgaaagcaccggatatgtcctgcccacacatatgatgagcaaaata
tcagaggaactgcctcgagagcctcagggtatcattgcctgctgcaaccctgtaccacca
atggtgaggcagcaggttaatgagctacatctgttggtgcagcaagccagggaaatgccc
ctcctgaaggctgaggttgcagctcaaaataaaaaaggattcacacccattaaaaagaca
gaagtaacattgtttggtccacatgatacatccaagactagtgaaagtgatcttccgcat
ttcccacccaacgaagtgcccgtgaaacaaggggcccttttctcagaggatgagccaaag
acggacgacgatgagctgaaaggaagcgatcttttagcacaagctaaaatcacagtgttt
caggagcccgaaacgcaggatgaacaaaagtcaatgtcggtgtctcagatgaaagccaga
cgtatcattgagtcttttgaaaaccctttcagaatgtatttaccctccactaatgtccgt
gtcaacaagaatgccaagtttgacccctcttcaaaaatatttgagattagcaaaagatgg
aaacttcagagtattgaacagcaacagaaggaacaggagacaaagagaaagtccaaagaa
gcgaggcaacaagcaaagaaagtaaaagagcaaagaaccaaggctaaacaaagctatcag
gagtctctacagaatgtcgccacagtgcgccagcaagcagcggaatcagcaaaagctgat
ggaaagaaaagagagcaggcttccagtccggttggagaggtgactcccaaaccaagcaag
aaactgatgaaagcggcagagacgccccagaaaacagaagctcctccccaagaaagcttc
aagcccttcgactacagcaagtcagacctcaaagtctttgctggtaacaaatcgaaagat
ggcacacagtttgatccaaaccggcaaaccggtaattttaagaaaaagaaaactccccag
ggacaaaagagcaactttgcagctggaaacaaaagtatgtcatacatggctggcaaatca
gagagaggatttcgccataactggccgaagagatag
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