Cololabis saira (Pacific saury): 133457303
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Entry
133457303 CDS
T09849
Name
(RefSeq) neural cell adhesion molecule L1-like protein isoform X1
KO
K06758
L1 cell adhesion molecule like protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133457303
Cell adhesion molecules [BR:
csai04515
]
Immunoglobulin superfamily
L1 family
133457303
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
Bravo_FIGEY
Ig_5
V-set
C2-set_2
Ig_4
Ig_6
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_Dep-1_3rd
Motif
Other DBs
NCBI-GeneID:
133457303
NCBI-ProteinID:
XP_061592398
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Position
12:28600957..28663512
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AA seq
1300 aa
AA seq
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MRLMGSLLLVLLWAFTSRATGLSIPLEVEQPPTIISHTTSPVIALPFDNTITIRCEATGN
PPPIYRWTKDGQDLILPNITTIRADHTDGTLMFHNKHFLQFQGIYRCLASNKLGTAMTGD
IKIIVSTPPKFPKEALDPVVVEQGEPIILECNPPQGVPPRQIYWMSIGLRHIEQDERVSM
GTNGNLYFSYALHKDSREDYCCFAAFHKIRTIVQKSAMAVVVKSYNDSSESGEASESGGP
PVRAPSLLLPSGVQSAKVLLKGEDLQLECIPGGFPTPSVTWMKMGDSLSDRVKLSNFQKL
LSIPSVDEKDQGKYMCTAENSAGKAVHYFDVIVREPPTWLAEPPPTQLTVITSDVHIKCS
VRGRPPPDITWRRNGELFRDDPETNRRVLDDTLVIHNARPEDSGVYQCEASNSHGSILAN
VNVMVMNLAPFILTKDFQEYAVILGGDVVMNCSVFSSPPSSISWNKNGTDIEGGRVVGLE
NRQSLKIISTEKDDSGRYVCVAKNTEGTSSVTAVLDVKDPTKIVSPPQDVQIVSGTSTQL
MCVAEYDKSLQDTFEVVWRKNGEEISLTPEENSRYIMEGDMLQIMNVNLDDQGMYTCVAK
TSLDEDNASALITVLDVPDAPTRLKISEVKNPRNITLSWEPGSDHNSSVTEFVVEYEETQ
WEPGRWKELQKVPGNQATAEPALHGHLNYQFRVYAVNAVGPGPPSEPTERYKTPSAAPDR
NPENIKIEGHLPHQMDVSWEPLRSIECNGPGLEYKLSYRKLGVEDMWEEQLVRRPSFVVR
NTSTFVPYEIRVQSRNSLGWGPEPKTVTGYSGEDVVFWHCLRENVSVPTAAPRDIGVEVV
NTTVLRVSWTPVPPATVRGHLGGYNVHWVKRKSLLNPGKTFNVHNYMSFPGKRSHAIVPG
LEPFSEYKLTVNVFNKKGNGPRSDPVTFSTPEGVPGLVPILTASNSHADSVLLVWGPPLE
ANGVLSGYLLRYHLLNETSLEVIDSREMNITEADITQWHLRGLEGDSLYRFHLSACTRAG
CGPPMAQESRTVAAADLNSFLSVPSSIPSNSTHPPLVPALLNISSYVSDTYAKISWTAAE
EHGDSQLYVAYMNNRDGIWYFSEAVNTSQSFHVIDGLKPGTLYTVRLMAKKLLDNASIFE
DVIETRVKGVANPSRDFSTERWFIGTMCAVALLTLVALVACFLRKNKGGKYAGTLPPQQL
DMFSMEKVKEKEDVNPDTESQEMNDDAFYEYSDSDKKPLRGSSSCSGDDAVGDSVSRDSL
VDYADEGGDFNEDGSFIGEYSEFKHRGSVSESSGPGRITA
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgatgggcagcctgctgttggttctgctctgggctttcacctccagggccaca
ggcctcagcattcctctggaagtggagcagcctccaaccataataagtcacacaacaagt
cctgttattgcgcttcctttcgacaacaccattactatcagatgtgaagcaactgggaac
ccaccaccaatatacagatggacaaaggatggccaagacttaatcttgccgaacatcaca
acaatcagagcagaccacacagatggaactttgatgtttcacaacaagcacttcctccag
ttccagggtatatacagatgcttagcttccaacaagttaggaactgccatgacgggggat
atcaagatcatagtttcaactcctccaaagtttccaaaggaagcacttgatccagttgtt
gttgagcagggggaaccaatcatcctggagtgtaaccctccacaaggtgtcccccctcgt
cagatctactggatgagcattggtctccggcacatcgagcaggatgagagagtttccatg
ggaaccaatggcaacctgtacttctcctatgccttacacaaagacagtcgtgaagactac
tgttgctttgctgccttccacaaaattcgcaccattgtccagaaaagcgccatggctgtc
gtggttaagagctacaatgattcctctgaaagcggcgaagcgagtgagtccggaggcccc
ccagtgagagcacctagcctgctgctgccctctggtgtccagtcagcaaaggttttgttg
aaaggagaagatctgcagctcgagtgcataccaggaggatttcccactcccagcgtgacg
tggatgaaaatgggcgacagtctgtctgatcgggtgaaactgagcaatttccaaaagctg
ctttccataccttctgtagacgagaaggatcagggaaaatacatgtgcacagctgaaaac
tctgctggaaaggccgtccactactttgacgtaatagtgcgagagccgccgacgtggctg
gcggagcctccgccgacccagctgactgtgatcacctccgacgttcacataaagtgctcg
gttagaggaagaccaccgccagacataacgtggaggaggaatggagaactatttagagac
gacccagagaccaacaggcgagtgcttgatgatactttggtgattcataatgccagacca
gaggacagcggcgtctaccagtgcgaggcctccaacagtcatggcagcattctggccaac
gtcaacgtcatggtcatgaacttggctcctttcatactgacgaaggacttccaagagtac
gctgtgatcctgggaggggacgtcgtcatgaactgcagcgttttcagctctccaccatcc
agcatctcttggaacaaaaatgggacagacatcgaagggggacgggttgttggcctggaa
aacagacaatcattgaaaataatcagcacagaaaaggatgacagtgggagatatgtttgc
gtggccaaaaacaccgagggcacgtcatccgtcactgctgtcctggatgtgaaagatccc
acaaaaatagtaagcccccctcaggatgtgcagatcgtcagtggcacctcgactcagttg
atgtgcgtggcggagtatgataagagtctgcaggacacttttgaggtggtgtggaggaag
aatggggaagagatatcactcacccctgaggaaaattccagatacataatggaaggcgac
atgctgcagatcatgaacgtgaacctggatgaccagggaatgtatacatgcgttgctaaa
acaagtctagatgaggacaatgcttctgcgctaataacagtgctggatgttcctgatgct
ccaacgagattaaagatatctgaagttaagaatccaagaaacattacactgtcttgggaa
ccagggagtgatcacaacagctctgtaacagaatttgtagtggagtatgaggagactcaa
tgggagcccggcaggtggaaggagctccagaaagttcctggtaaccaggcaacagctgag
ccggcgctccacggacaccttaactatcagtttagagtttacgccgttaacgccgtcgga
cctggaccccccagtgagccaactgagagatacaaaacaccttctgctgcacctgacaga
aacccagaaaacatcaaaattgaaggacatcttcctcatcagatggatgtaagctgggag
ccactgcggtccattgaatgcaacggaccgggccttgaatacaagttgagctaccgcaaa
ctgggggtggaagacatgtgggaggagcagcttgtgagaagaccctcgtttgttgtgagg
aacacaagcacttttgtcccctacgagatcagagttcagagcaggaacagcctcgggtgg
ggtccagaacctaaaactgttacaggttactctggtgaagatgttgtcttttggcactgt
ctgcgggaaaatgtgtcagttcccactgcggcaccgcgggacataggagtggaggtggtc
aacaccacagttctgagagttagctggaccccggttcctcctgccactgtgcgaggtcat
ctcggtggctataatgttcactgggtaaaaaggaaaagtcttctgaatccagggaagact
tttaatgtccacaattacatgtcttttcccggaaaaaggagtcacgctattgtgccaggg
cttgaacctttctcagagtacaaactcaccgtcaacgtgtttaacaagaaaggaaatggg
cccaggagcgatcctgtcaccttcagcaccccagagggagttccagggttagtgcctatc
ctaaccgcctccaacagtcatgctgactccgttcttctggtatggggaccaccgctggag
gcaaatggcgtcctgtccggttatctcctgcggtaccacctcctaaatgagacttcactt
gaggtgattgattcccgggagatgaacatcacggaggctgacatcacccagtggcacctt
aggggactggagggagacagtctctaccgctttcacctcagtgcctgcactcgagcgggt
tgtggacctccaatggcccaggagagcaggactgtagcggcagcagacctcaacagcttt
ctatctgttcccagctctatcccgagcaattctactcatcctcctttagttccagccctg
ttgaacataagctcctatgtgagtgacacctatgccaaaatcagctggactgccgcagag
gagcatggggactcgcagctttatgtggcttatatgaataaccgtgatggtatctggtac
ttctcagaggctgtaaacacctctcagagtttccacgtaattgatgggctcaaacccggg
acgctgtacaccgtacgcctcatggccaagaaactacttgataatgctagcatatttgag
gacgttatcgagacacgagtcaaaggtgtggcaaatccatcaagagacttttcaactgag
cgctggttcattgggaccatgtgtgctgtggcactgctcacccttgttgcactcgtggcc
tgctttctacggaaaaacaaaggtggcaaatatgcaggtacgctgccaccccagcaacta
gacatgttctccatggaaaaagtgaaagagaaggaggatgtcaaccctgacaccgagtca
caagaaatgaatgacgacgccttctatgaatacagtgacagcgataaaaagccactgagg
ggcagcagctcgtgttcaggagatgacgccgtcggggacagcgtcagcagagacagtctg
gttgactatgcagacgaaggaggagacttcaatgaggacgggtcatttatcggagaatat
tctgaatttaagcacaggggctcggttagtgaatccagtggacctggccgcatcactgca
tga
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