Cololabis saira (Pacific saury): 133457369
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Entry
133457369 CDS
T09849
Name
(RefSeq) serine/arginine-rich splicing factor 6-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03040
Spliceosome
csai05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133457369
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133457369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133457369
Spliceosome [BR:
csai03041
]
Common components
Common spliceosomal components
SR proteins
133457369
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
133457369
NCBI-ProteinID:
XP_061592549
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All DBs
Position
12:31074395..31080788
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AA seq
380 aa
AA seq
DB search
MPRVYIGRLSYHVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDNRDSDDAVYELNGKEL
CGERVIVEHARGPRRDRDRDRDRDGYGGGYWGGGRSSGYNNNNNSSSRSRTGRDKYGPPV
RTEYRLVVENLSSRCSWQDLKDFMRQAGEVTYADAHKERANEGVIEFRSYSDMKRAMDKL
DGTDINGRKIRLVEDRPRRQRSYSGSRSRSRSRRRSRSRSRRSSRSRSRSHSRSRSHSPK
RRHSKSHSKSGDRKSHSRSRKSRSRSRKSKSRSQSHKSRSRSAERKFKSRSKSRSKVKSE
RDSRSRSKEMSGDRKSRSRSASPVENGEEEHVEKSATRSPSPQEDDRRSKSRENRSASRS
KSRSKSRSRSRSRSRSASQD
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcgtttacatcggacgattgagctatcatgtccgcgagaaagatatccagcga
tttttcagcggatatggcaaattgctggaaattgatttaaaaaacggctatggattcgtg
gagtttgaagataaccgggattccgacgatgccgtgtatgagctgaacgggaaggagctc
tgtggggagcgtgtcatcgtcgagcacgcccggggaccgcgcagagaccgggaccgggac
agagaccgcgatggctacggtgggggttactggggtggcgggcgcagtagcggttacaac
aacaacaacaacagcagcagcaggagtcgtactggcagggacaaatatggacctccagtc
cgtactgagtaccgtctcgttgtggaaaacctgtccagtcgctgcagttggcaggatctt
aaggacttcatgcgtcaggcgggagaagtcacctacgcagatgcccacaaggaacgtgct
aatgagggagtgattgagtttagaagctactctgacatgaagagggctatggacaagcta
gatggcacagacattaacgggcgtaagattcgtttagtggaagatcgacctcgcaggcaa
agatcctactctggaagccgttcaagatctcgtagtcgtcgccgctcccgcagcagaagc
cgcaggagctcgagaagtcgctccagatcccactccaggtctcgttcccatagccccaaa
agacgccactccaagtctcactccaaatcgggagacaggaaatcgcactctcgcagccgc
aaatcccgttctcgatctcgcaagtccaaatcgcgctcacagtctcacaaatctcgctcc
cgttcagctgaacggaaatttaagtctcgttccaagagccgttctaaggtaaagtcagag
cgagattcacgcagcagatcgaaggaaatgtctggtgacaggaaatcccggagccgttcg
gcttcccccgtcgagaatggggaagaggagcacgttgaaaaatctgccacacgctctcca
tctccacaggaagacgatcgccgttccaagtcgagagagaaccgctcagcttcccgttca
aagtcccgctcaaagtcccgctcaaggtctcgctcgcggtccagatcggcctctcaggat
tag
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