Cololabis saira (Pacific saury): 133457373
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Entry
133457373 CDS
T09849
Symbol
nsun5
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
csai03009
]
133457373 (nsun5)
Enzymes [BR:
csai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
133457373 (nsun5)
Ribosome biogenesis [BR:
csai03009
]
Eukaryotic type
Other ribosome biogenesis factors
133457373 (nsun5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
FtsJ
CCDC106
RsmF-B_ferredox
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
133457373
NCBI-ProteinID:
XP_061592561
LinkDB
All DBs
Position
12:31139981..31146011
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AA seq
485 aa
AA seq
DB search
MSLYMKAAEILEKAERKQAALKTLVYDSKFPKIKQLFALVCETQRFSPVLQELIESSKLL
KLTKMSLHLAMVLVYDTVLGRGLKCGGSWKAMMMKHRPRLQSELARMKVKKNVSRNEDLL
PAGAQHPAGNKLPRYARVNTLKTTVEDAVDYLKRDGFNYLGEAVRLTDLDLKQKSFVRDL
HLPEVLVFPPKTDFHDHFLYKAGHIILQDKASCLPAHLLNPPVGSHVLDACAAPGNKTSH
LAALMKNKGKLFAFDLDTKRLATMATLLLRAGVTCQQLANQDFLKVDPDSPLYKDVEYML
LDPSCSGSGMVCLGDSSADQEKDKARLASLASFQLRCLNHGLRFPRLKRLVYSTCSVHSQ
ENEDVVTACLQQNPGFRLVSLLPQWPERGLEPLSQCLRASTTKTLTHGFFVALLEKHSKP
VATQQQPPDQTRAAEEEKPALSHEESEASDTEDRCIPAAGQTDAGPSKKKKRKKRNKKQK
VATPE
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgtatatgaaagcggctgagatcctggagaaagcggagaggaaacaggctgcc
ctgaaaactctggtctacgacagcaagttcccgaagatcaagcagctgttcgcgctggtg
tgtgagacgcagaggttttctcccgtcctgcaggagctcatcgagtcctccaagctgctc
aagctcaccaagatgagcctgcacctggccatggtgctggtgtacgacacggtgctgggc
cggggcctgaagtgcggcggctcctggaaggccatgatgatgaagcaccgacccaggctg
cagtcggagctggctcgcatgaaggtgaagaagaatgtcagcaggaacgaggacctgctc
ccagccggggcccagcatcctgcagggaataagctgcccaggtatgcgcgtgtgaacaca
ctgaagaccacggtggaggatgctgtggattacctgaagagggacggcttcaattacctg
ggagaggccgtcaggctgacggacttggacctgaagcagaagagctttgtgagggacctg
cacctaccagaggtcttggttttcccacccaaaacagatttccacgaccacttcctgtat
aaagcgggtcacatcattctgcaggacaaagccagctgtctccctgcccatctcctcaac
cctcccgttggcagccatgtccttgatgcatgcgctgctcctggcaacaaaaccagccac
ctggcagccctcatgaagaacaaaggcaagctgtttgcatttgatttggacaccaagcgc
ctggccaccatggctactctgctgctcagagcaggggtcacctgtcagcagctggcaaac
caggacttcctgaaggtggaccctgacagcccgctgtataaagatgttgaatatatgctg
ctggatccctcctgcagtggctcaggtatggtgtgcctcggggacagctcagccgaccag
gagaaggacaaggcccgcctggcgtccttggcatccttccagctgcggtgcctgaaccac
ggcctccggttcccccgcctgaagagactggtctactccacctgctccgtccacagccag
gagaacgaggatgtcgtgaccgcgtgtctgcagcagaaccccggcttcaggttggtttct
ctgctgcctcagtggcctgagcgaggcttggagccactctcgcagtgtttgcgtgccagc
accaccaagaccctcacacatggcttctttgtagccctgctggaaaaacacagcaagcct
gtggcaacgcagcagcagccgcctgatcagacgagagctgctgaagaggagaaacctgca
ctttcacatgaagagtctgaagcctcagacacagaagacagatgcatcccagcagcagga
cagactgacgctggacctagcaagaagaagaagagaaaaaagagaaacaaaaagcagaag
gtggctacaccagagtaa
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