Cololabis saira (Pacific saury): 133457395
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Entry
133457395 CDS
T09849
Symbol
nr1h5
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5 isoform X1
KO
K08538
farnesoid X receptor beta
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133457395 (nr1h5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
csai03310
]
133457395 (nr1h5)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
133457395 (nr1h5)
Nuclear receptors [BR:
csai03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
133457395 (nr1h5)
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Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
133457395
NCBI-ProteinID:
XP_061592604
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Position
12:complement(32407577..32428421)
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AA seq
518 aa
AA seq
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MRDWTEPEMSFPAGGFLSHSDGYCSTEQFQYYDMLADPLGYSLQDPDLQLLPHSQQQYIP
ANLPFSLYSSPPSSTSSPSSSSSSSQFCHPPYQYSPVCLEPCGPGPEPLCGGLAPGFGGV
ELPLGRRSRLGMGGKGRGQDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYHCK
TGGGCEMDMYMRRKCQDCRLRKCRAVGMLAECLLTEVQCQSKRLRKGGKGRAQEEEENTG
SRRVSSTSRLPAQTRPASLTREQKYIVDTMVEAHRLYRGQDGSSYTVGQTLEDVYALPSS
SVLPSCRVFRRQLFDWPCSEDGEGLSDAVMPHLQKLLQFARTVPGFDLLDFADQSALLSV
SSLEVMFLLSAQQFSHNPAGPSAALQLFSTSTHNWLRCAESRDHVLSRTLISSGGSEELL
RPVLNFLHSMAALQVTEAEYALLTATTLLCSDRASLQAAGCVERMQELILDLLSRTCGAH
GGAARGGPQRFGRLLGRLTELRTLHHNYLLLTRQQPGH
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgagagactggactgagcctgagatgagctttccggcaggggggtttctgtcccactca
gacgggtactgctccaccgagcagttccagtactatgacatgctggccgaccctctgggc
tattccctgcaggaccctgacctccagctgctccctcacagccaacaacagtacatcccg
gcaaatctgcccttctccctctacagctctccgccctcctccacttcctccccttcctct
tcctcttcctcctctcagttctgccatcctccgtaccagtacagccccgtgtgcctggag
ccctgcgggcccggcccggagcccctctgcgggggcctggccccgggcttcgggggggtg
gagctgccgctcggccggaggtctcggctggggatgggagggaagggccgggggcaggac
gagctgtgtgtcgtgtgtggagataaagcatcagggtatcattacaacgccctcacctgc
gaggggtgtaaagggttcttcaggcgtagcgtgactaaaaaggccgtgtatcactgcaag
accggcggcggctgtgagatggacatgtacatgaggagaaagtgccaagactgccggctg
aggaagtgtcgcgccgtagggatgctggccgagtgccttctgactgaggtgcagtgccaa
tccaagcggctgaggaagggaggtaaaggccgagcgcaggaggaggaggagaacacgggc
agcaggagagtcagctccaccagcaggctccccgcgcagacccggcccgccagtctgacc
cgggagcagaagtacatcgtggacacgatggtggaggctcaccgcctgtaccggggtcag
gacggcagcagctacacggtgggtcagacgctcgaggacgtgtacgccctgcccagcagc
tccgtgctgccctcatgccgtgtcttccgtcggcagctttttgactggccgtgctcggag
gacggggagggcctgagcgacgccgtgatgccccacctgcagaagctgctgcagttcgcc
aggacggtcccaggcttcgatctcctggatttcgccgaccagagtgcccttctgtccgtc
tcgtctctggaggtcatgttcctgctctcggctcagcagttctcccacaaccccgccggt
cccagtgcagccctgcaacttttcagcacgtcgacgcacaactggctccgatgtgcagag
tccagggatcacgtcctgagcaggacgctgatcagctcaggaggcagcgaggaactcctc
agacccgtgctcaacttcctgcacagtatggcggcgctgcaggtgacggaggccgagtac
gccctgctcactgccacgacgctgctctgctcagaccgcgcgtccctgcaggcggccggc
tgcgtggagcggatgcaggaactgatcctggacctgctgtcccggacgtgtggggcccac
ggcggagctgcacgagggggcccgcagcgcttcggccggctgctgggccgtctgacggag
ctgcggacgctccaccacaactacctcctcctgaccaggcagcagccgggacactga
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