Cololabis saira (Pacific saury): 133457398
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Entry
133457398 CDS
T09849
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X1
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
csai01001
]
133457398 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133457398 (trim33)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133457398 (trim33)
Protein kinases [BR:
csai01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
133457398 (trim33)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
133457398 (trim33)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-C3HC4
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
133457398
NCBI-ProteinID:
XP_061592618
LinkDB
All DBs
Position
12:complement(32456043..32492090)
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AA seq
1186 aa
AA seq
DB search
MADNKGEEDMEPSANSDPVPSEPETEPSETKPENELIPTETNSNITAEAEPGDSAREAPT
PTGDAAAATAATAAVEEANGGASSAVSPQLSGESSSTEPGTSEAPNPGDAAAGAAAPPAG
SAATPAPAPVNLLDTCAVCKQSLQTRDCEPKLLPCLHSFCLKCIPQPDRQISVQVPGPHG
QADTHIVNVMRCSVCHQDYKQSDIIDNYFVKDTTEATNTSDEKSAQVCTSCEDNAGTIGF
CVECGEWLCKTCVEAHQRVKITKDHKIRTKEDADAASEPVSPSGQRPVFCPIHKQEPLKL
FCETCDTLTCRDCQLQEHKEHRYQFLEEAFQNLKGVIENNMAKLQEKKNYVHYSLSHVQS
RLKELNETHRKVEHEIKIAVFTLINEINKKGKSLLQQLESVTKERSMRLVAQHKDTTQLA
QQIHHVLNFCHWAITSGSSTAFLYSKRPIMFQLRQLFKARMEPAPQSNGVVRFFCDPTFW
AKNVVNLGNLVVEKPPPPAQPPNPMAGPAISPGHGHPGKHPGQINLAQLRLQHMQQAAYA
QQKQQHQQQQQQIQQQMRIASQMSQQHARQAGPPMVQQPPRLISMQQLQRGPGGMNGGPG
PSMYPSSHHLRIPGPPQSRTSTAQPRHNGQQYSSLMQPQLQRQMSIESEMSHQRFRFLLQ
SGHSNPGHAGPFPVASLHNANPTSPTSASMAGAHSHRGPASPIIGPIELIPSVTNPENLP
CLPEIPPIQLEDAGSSNLGHLLTRYITASTQHHLGTVDMNPSPGLSTLSPGSSGLSNAHT
PARPSSTSSTGSRGSCSSAGRAGPGGGANADQVRVKKEPGTEDSYSCPGSSLKTERGKDA
GRSACMMSSPENSPLGLGSGQDSLKTLGDRIKTEPDSEMLCAGLNGTGAIASCSAATTTT
STTSSSADNSSSKLDCPVTNGKRTENKGSGASEATGSLGGKEDDPNEDWCAVCINGGDLL
CCDHCPKVFHMKCHVPTIRIFPKGDFLCTFCRSISSPEIDYCEDSKKIKAEQSLSPQDQR
RCERLLLYIYCHELSMGFREPVPSSVPNYYKIIKQPMDLKKAKKKLQLHSPYYYKSIQDF
VSDIRLIFKNCAEYNEMSRIIQVYDEEKEINPQAGSEMAISGKAVSVYFEEKLLELFPGQ
IFPETPESAEQPEEKEKEYETDDSEEDFIQPRRKRLKTDEKIVHIK
NT seq
3561 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaggaagacatggagccgtctgctaattcagacccagtgcct
tcggagccagagacggagccgtccgaaaccaagcccgaaaatgagttaatacccacagaa
acaaattctaacatcactgccgaggccgagcccggcgacagtgcgagggaggctccgaca
cccaccggcgacgccgctgcagcaacagcagcaacagcggcggttgaggaagccaatggc
ggcgccagcagcgcggttagcccgcagttatcgggggagagcagcagcacggagccgggg
accagcgaggcccccaaccccggggatgctgcggccggagcggccgcacctcccgcgggg
tcggcggccacgccggcgcccgctcccgtcaacctgctggatacgtgcgccgtgtgtaaa
cagagtctgcagaccagagactgcgagcccaaactcctgccctgcctgcactcgttctgc
ctgaaatgcatccctcagccggacaggcagatcagcgtgcaggtgcctggaccgcacggg
caagcagacacacacatagtaaacgttatgcgatgctcggtttgccaccaagactacaag
caaagtgacattattgacaactactttgtcaaagacaccactgaggccaccaacacgtcg
gatgaaaagtctgcacaggtttgcacaagttgcgaagacaatgctgggaccatcggcttt
tgtgtggagtgtggggagtggctgtgtaagacctgcgtggaagcccaccagagagttaaa
atcaccaaggaccacaaaattcggacaaaggaggatgctgacgcggcgtctgagcccgtc
agtccatcgggacagaggcccgtgttttgtccaatccacaagcaggaacctctcaaactg
ttctgtgagacgtgtgacactttaacctgccgggactgtcagcttcaggagcacaaggag
cacagataccagtttcttgaagaagctttccagaacctcaaaggagtcattgagaacaac
atggctaagctacaagaaaagaagaactatgtacattactctttatctcacgtgcaaagc
aggttaaaagaactgaatgagacgcataggaaggtggagcatgagatcaaaatagcagta
tttactctcataaatgaaatcaacaaaaagggcaagtctttgctgcagcagttggagagt
gtgacaaaagagcgcagtatgaggctcgtggctcagcataaagataccacccagctcgcc
cagcagattcaccatgtgctcaacttttgccactgggccatcacgtctggcagcagcaca
gcgttcctctacagcaagagaccgatcatgttccagctccgccagctcttcaaggctagg
atggagcccgcaccgcagtccaatggggttgtgcgcttcttttgtgaccccacgttctgg
gccaaaaatgtggtaaatctaggtaatttggtagttgagaaacctcctccacctgcacag
cctcccaatccgatggcaggaccggccatttcaccaggtcacggtcaccccggcaaacac
ccgggacagatcaacctggctcagctccggctgcagcacatgcagcaggcagcctacgcg
cagcagaagcagcagcatcagcagcagcaacagcagatccagcaacagatgcgcatcgcc
tcccaaatgtcccagcagcatgccagacaggccggcccgcccatggttcagcagccccca
agactaatcagtatgcagcagctccagagaggacccgggggtatgaacggaggacccggt
ccctccatgtacccctcctcccaccacttgcgtattccaggtccaccacaaagccggacg
tccacagctcagcccagacataacgggcagcagtattcctcgctgatgcagcctcagcta
cagagacagatgtctatagaatctgagatgagccaccaaaggtttcgtttcttactgcaa
tcagggcattccaacccaggacacgcgggcccttttccagtggcatccctgcataatgcc
aatcccacgagtccgaccagtgccagtatggccggggcccattctcaccgcggccctgcc
agccccataattggtcccattgagctcattccctccgtcaccaatcctgagaaccttccc
tgcctacctgagatcccgcccattcagctggaagacgctggttccagcaacctcggtcac
cttcttactcgttacatcacagccagcacacagcatcatcttggtacagtggacatgaac
ccgtcgccgggattgtccacactctctcctggttcatcaggtctgtccaacgcccacaca
ccagcacgtccctccagcacatccagcacgggcagcagaggaagctgtagctcagcaggg
agggcggggccagggggcggggctaatgcagaccaggttagagtgaagaaggagcctggc
acagaggacagctacagctgtccaggttcttctttgaagacagagcgggggaaagatgct
ggaaggagtgcctgcatgatgagcagtccggagaacagcccgctaggactcggatcaggc
caggattctctgaagacactgggagatcgcatcaaaacggagccagactctgagatgctg
tgcgcagggctaaatggcaccggtgccatcgcgtcatgttccgctgctaccactacgacc
tccactacctcatcatccgccgacaacagcagcagcaagttagactgtcctgtcaccaac
ggaaagaggacagagaacaaagggagcggagcgtctgaagcgacggggagtctgggtggg
aaagaggacgaccccaacgaagactggtgtgccgtttgtatcaacggcggagacctgctg
tgctgtgaccactgtcccaaggtgttccacatgaaatgccatgtacccaccataaggatc
ttcccaaagggggacttcctctgcacgttttgccggagtataagctcccccgaaatagac
tactgtgaagacagcaagaaaataaaagcggagcagagcctgagtccccaagaccaaagg
agatgtgaacgcctcctgttgtacatctactgtcatgagctcagcatgggctttagggaa
cccgttcccagctctgtacccaactactacaagattattaagcagcccatggacctgaag
aaagcaaagaagaagctccagttacacagcccctactactacaagtccatccaggatttc
gtgtctgacatacgccttatcttcaaaaactgtgcagagtacaatgagatgtctcgaata
atccaggtttatgatgaggagaaagagattaatccgcaggcgggatcagagatggcgata
tctggcaaggcggtgagcgtgtactttgaggagaagctgctggagctgttcccaggccaa
atcttccccgaaacgccagaatcagccgagcagccggaagaaaaagaaaaggagtacgag
acggacgactccgaggaggacttcatacagcccaggcgcaaacgtttgaaaacggacgaa
aagattgtccacataaagtaa
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