Cololabis saira (Pacific saury): 133457420
Help
Entry
133457420 CDS
T09849
Symbol
nphp4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
csai03037
]
133457420 (nphp4)
Cilium and associated proteins [BR:
csai03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
133457420 (nphp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
133457420
NCBI-ProteinID:
XP_061592666
LinkDB
All DBs
Position
12:complement(34128037..34377989)
Genome browser
AA seq
1363 aa
AA seq
DB search
MKNNKISFNEVLYFHTSLLLPNTLLVLELVSLLPKPDSSHQAVGRGFSVLELFTNRPEGP
PTCGDRRLNLHHGSPRGLLHPLLKHTDDYSSLMKIIDGAYLDCVVKNHPSLLPVIHLLPE
NVLVSGDDNIPGLTASPTGDVLLKPQPLKTTPFTLSRLAISLQPSLEEFESQLLQLINAD
CHNTPGPDDTQKTVVVQERRLHVGVHNGWCFLDKPQVVVLEPLASGVRRRADSTSRKSLL
AKDSSATSSFPQMLGLRSSLDLTLASHQALAIVFQLEYAFSAPAGRETLLSAASSARAAF
LQCLRWGIWCPFQEPSDWKGEEIQLVLQGGAKPNPHGVMVYSTGVSAKPQSSAPVLAPDA
AQEASKAKDMITFWLSSSSERKAPSPKATLRTKHEDMPRRRRSPSSPSQGQKHTPQTSPP
ASPRGPGLSLSQLAATSRYPTISHSSSALPWQHSFPSLLHPSPLASAHQLSHVACSAVSN
IAHLEMDLQREGDEQTSMQDEGDQLQELPFTPVHAPVITLGMNAPSSCSVSSRSSLAHLF
SAGFPEIVDCSGQVAEVLDPTEPLPFDPQREDSDLLQGNLLVFQFLAFTRVPAVGAGADW
PHNIYLTFQFYRFPPTTSQQLQLLTRDKGKTKPSEALPCVLATISNGGALNTGSPGLQVQ
FRVDDSFLKPGEKRWFLRYLALHTMHIDIWDSESLLLIGSTAVELKYMLRQGKSAVQALH
ELEVLTTDYVGEDTLLTCADVGQHEASSPVTVRTIVRGRIHVRTGNIGCAVDPTRKRAVD
KMTSHSHIIIPREVTSGFRGGSLSPRNILHLNARNTAHADRLGMDSGPTSSLRSRVTAET
ITPRDRNPNQLDSGRRKLDCMAAVHQREAREDAKAAKVVVHTKDAKFPREVHPVKPEGEH
SKAERIANMLGQAITTQHLLYASLGSAEYMEFVLKNPFNVPQTVTIQSDDPELSVITTTE
EWRYFKALTKTPTPLEENMFHVEEDAPGPRIYLRPKESIHIPLKYQSFLCDHTMTPQGPS
FLPTGQSSRVAKKNLSNIIPAKTIKVTFKAEDGKPMAICQVTVEPTPHVVDQTFRLYHPQ
LCFLKKAIRLPPWHDPKAEDPDARSHISVRCSDPNIICQTRMLVPGEPQDVYLKVPGSPS
PHIKTFFVMVFTDKWMAAPSQIWHVHVHFLERLDVSCVTGQRCCQSLVLKGKQAVRKVRC
FSSHPKEIEVDPAGVFVLPPAAVHELQLKVQPWHAGSRFLYVNAVDVEQRRLVTAWLLCL
NVHRPVLSKAFELSVPVGGGRGSSRKITYTNPYTSSRTFLLRSDHPDLLQFKEDKFQIGG
GESYTIGLRFAASQSPGSAEILVYVNNLEEKTEETFCVKVNYS
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaacaagatttcttttaatgaggtcctgtacttccacacttctttgctgttg
ccaaacacgctgctggtactggagctggtgtccttgttgcccaaacctgacagctcccat
caggctgtggggagaggcttcagtgtcctggagctttttaccaacagaccagagggtcca
cccacttgtggagacagaaggctgaatttacaccatggatccccaagaggtcttctccat
ccgctgctgaagcacactgatgactacagcagtctgatgaagattattgatggagcctat
ttggactgtgtggttaaaaaccatccttcattgctccctgtgatccatctcctgcctgag
aatgtcctcgtgtctggagatgacaacattcctggcctcacagcttctccaacaggagat
gttctgctgaaacctcagccactcaagacgacgcccttcaccctgagtagactggccatt
tccctgcagccgtccctggaagagtttgagagccagctgctgcagctcatcaatgctgac
tgccataacacgccaggaccagacgacacgcagaaaacagtcgtcgtccaggaaaggagg
cttcatgtcggtgtccacaacggctggtgttttctcgacaagccccaagtggtggtacta
gagcccctcgcttcaggggtcaggcgacgagcagacagcacctcgagaaagagcctgctg
gccaaggacagctcagcaacatcctccttccctcagatgttgggtcttcgcagcagtctg
gatctcacgctggccagtcatcaggctttggcaatcgtctttcagttggagtacgccttc
tccgctccagcaggtcgagagactctgctgtctgctgcctcctcagcccgagccgccttc
ttgcagtgccttcgttgggggatttggtgccccttccaagagccatctgactggaaaggc
gaagagatacagcttgttctgcaaggaggtgcaaagccaaaccctcatggagtcatggtc
tacagcacaggagtgtctgccaaaccgcagagctctgcaccggtcttggctccagatgca
gctcaggaggcctctaaagcgaaagatatgataacattttggctgtcgtccagctcggaa
aggaaggcacccagcccaaaggcaactctaagaactaagcatgaggatatgccacgtcgg
agaagatcaccttcatcaccttcacagggtcaaaaacacactccgcagacctctccacca
gcgtctcctcgaggccccgggctctcactgtctcagctggcagctacttcacgctacccg
accatcagccactccagctcggcgttgccgtggcaacactcatttccttctctgctccat
ccttccccgttggcatcagcccaccagctgtcacatgtcgcttgctcagctgtcagcaac
atcgcccacctggagatggacctccagcgggaaggtgatgagcaaacatcaatgcaggat
gaaggagaccagctccaggagctgcccttcacccctgtccacgcacctgtcataactcta
gggatgaatgcgcccagctcctgctcagtcagctccaggagctcgctggctcaccttttc
tcagctggcttccctgaaatcgtggactgcagcggccaggtggcggaagtcctggacccc
acggaacctctgccctttgatcctcagcgggaagatagtgaccttttacagggaaaccta
ctggtgttccagttcctggcgtttaccagagtacctgctgtgggggctggtgcggactgg
ccacacaacatttacctcaccttccagttctatcgcttcccaccgaccacatcgcagcag
ctgcagctgctgaccagggacaaggggaagaccaaaccaagtgaggcgctcccctgtgtc
ctagccaccatcagcaacggcggcgctcttaacaccggttctcccggtctgcaggtccag
ttcagagtagacgacagtttcctgaaaccaggagagaagcgctggttcctccgttatctg
gctctccacactatgcacatcgacatctgggacagtgaatcattgctcctcatcggctct
actgccgttgagctcaagtacatgctgcgtcagggtaaatctgcagtgcaggcccttcat
gaactggaggttctgaccactgattatgtcggagaggacaccttactgacatgcgcagat
gtgggtcaacacgaggcctccagccctgtgacggttcgcaccatcgtcagaggccggatc
cacgtgcggacggggaacataggatgtgcagtggatcccaccaggaagagagcagtagac
aagatgacgtctcattctcacatcatcatacctcgagaagtcaccagtggcttcagagga
ggaagcttgtcacccagaaatatcctccacctcaatgcgaggaatactgcacatgcagac
agactggggatggattcaggtccaacgtcatcgttaagaagcagggtcacagctgaaacc
atcacacccagagaccgcaacccaaatcaactggacagtgggcgcaggaagctggactgc
atggctgccgtccatcaacgcgaggcaagggaagatgccaaagcagcaaaagttgtggtt
cacaccaaagatgccaagttccctagagaagttcatccagtaaaacccgagggagagcac
agcaaggcagagagaatcgccaacatgctgggccaagccatcaccacccagcacctcctc
tatgccagcctgggttctgctgaatacatggagtttgtccttaaaaatcccttcaatgtg
cctcagaccgtcaccattcagagtgatgacccggagctcagtgtcatcaccaccactgag
gagtggcgttacttcaaagcactaaccaagactcccactccactggaggagaacatgttc
cacgtggaggaagacgccccgggtcccaggatttaccttcggcccaaagagagcatccac
atacctttgaaataccaaagcttcctctgcgaccacaccatgaccccccagggaccaagc
ttccttcccacaggccaaagttctcgggtggccaagaagaatctgtccaatattattcct
gccaaaactatcaaggttacattcaaagcagaagatggcaagcccatggccatctgccag
gtgactgtggagccgacgccccacgtcgtggaccagaccttccgactttatcaccctcag
ctttgtttcctcaagaaggccatacgcctgccgccgtggcacgaccccaaagctgaagac
ccagacgccaggtctcatatttccgtgcgctgcagtgatcctaacatcatctgccagacg
aggatgctggtgccaggggagcctcaggatgtgtacttgaaagtgcctgggagtcccagt
ccacacataaaaacgttttttgtcatggttttcaccgataaatggatggcagcgccctcg
cagatctggcatgttcacgtgcatttcctggaacggctggacgtcagctgtgtgaccggc
cagcgatgctgccagtcgctggttctgaaggggaagcaggctgttcggaaggtcagatgt
ttctcatcacaccccaaggagatcgaggtggacccagccggtgtgtttgttttgcctcct
gcagccgtgcatgagctccagctgaaggtgcagccgtggcacgccggcagccgcttcctc
tatgtgaacgcagtagacgtggagcagcggcggctggtcactgcctggctgctctgtctc
aacgtccaccggcccgtgctttccaaggcctttgaattgagtgtccccgttggaggcggg
cgtggaagctccagaaaaatcacttacaccaacccgtacaccagcagccgtacgttcctg
ctccgctccgaccatccggacctgctccagttcaaggaggataaattccagattggtggg
ggagagagttacacgatcggattacgtttcgccgccagccagagtcccggctcagcagag
atcctggtttacgtgaacaacctggaagagaaaacggaggagacgttctgtgtgaaagtc
aactattcgtga
DBGET
integrated database retrieval system