Cololabis saira (Pacific saury): 133457503
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Entry
133457503 CDS
T09849
Symbol
lamb2
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04510
Focal adhesion
csai04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133457503 (lamb2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133457503 (lamb2)
BRITE hierarchy
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Alanine_zipper
Laminin_II
Motif
Other DBs
NCBI-GeneID:
133457503
NCBI-ProteinID:
XP_061592828
LinkDB
All DBs
Position
12:complement(43764012..43854236)
Genome browser
AA seq
1808 aa
AA seq
DB search
MRASPVLLFCALAAAVAQEPDHSHGCAHGSCYPATGDLLVGREKSLKASSTCGMIRKDPY
CIVSHLQDEKKCFECDSRRPYDPVYNTINHRIENVITTFKPHRKNCWWQSENGKADVFIQ
LDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQVYRYFAHDCAAAFPGIFQGPLSN
VNDVVCESRYSDIEPSSEGEVIYKVLDPAIRIQDPYSPDIQNQLKITNLRVNFTKLHTLG
DNLLDPRAEIKEKYYYAVYELVVRGNCFCYGHASECAPIDGIRGDIEGMVHGRCVCNHNT
KGLNCELCDDFYNDLPWRPAEGRNTHACKKCNCNGHSSRCHFDMAVFLATGNGSGGVCDD
CQHNTAGRNCETCKPFYYKDPSRDIRDPRVCLACDCDPDGSQDGGLCDGGTDTVLGSEAG
RCRCKSNVEGPRCDKCRTGFFGLSADNLQGCQPCQCDPRGTVSISSQCDPVSGDCFCKRL
VTGRSCDQCLPEHWGLNHDLNGCRGCECDVGGALDNHCSMDNGQCRCRSHMTGRQCTQVD
SGYFFMALDHFLYEAEFATMGGGSTVETREHQPGRPATWTDLGFALVPEGGTLEFQISNI
PFSMEYELLLRYETQMPRDWEEVRISVVRPGPIPTSSPCGNTIPDDDRLTAALPAGSRFL
VVPRPVCLEAGLTYTLRLEFTRYQDANSIQTGGAYAGGAGGAGGAYAVLLVDSIALMPRH
VSMEMFNAGDPGSTARRQSYERYRCHEGAKGVIRPAMSDTCAKLISSMSAVINDGALPCN
CDPQGSLSSLCDVRGGQCRCKPNVIGRRCHQCSPGTYGFGPSGCSACGCSLEGSVSRFCD
ESSGQCPCRPGAFGPRCDGCQTGHWGFPSCRACHCNGHADHCDQRSGACIGCRDNTGGDK
CDRCADGYYGNPVLGGASSGQCRPCPCPDGPDSGRHFATSCYQDNRNRQIICNCNQGYTG
IVKRSGVTVFKRARCEECAPGYYGNPSQPGGRCQPCQCNNNIDMSDMESCDRRTGACRKC
LYNTEGDACGVCRSGYFGDAARRNCRKCTCNFLGTELSQCMERGDCVCQRASGQCQCRPN
VVGLSCDHCAPNHWNMGGGAGCQPCDCDPNNSVTSSCNEFSGQCQCRDGFGGTTCRDCQE
NFWGDPRIQCRACDCDWRGIETPQCSRATGHCACKPGVSGVRCDQCARGFSGQFPHCQPC
HQCFGDWDRIVQDLAVRTKTLAERAHEIQSTGLTGPYEKFFKALEEKLARAQGIVNARNA
TAAAVGTLMELIEDLRAHIGETTDTLNRLEGDLTLVQDGSSEAGKELSALEREARELNLS
SALLHRQLDVLKNSNFLGAFDSIRSSYNVSRDAERRANASTVARPSTVSRSADTRRRTER
LIAAKKDDFNRKNSANKRALGDLSVRAQELDLKTINEKVCGEPGDAPCGESPCGGAGCRD
DEGNRHCGGLNCNGAVAAAENALERAGRAETKLGRAVEEMQGLFSKVAEAKSQAEDARSR
ARAALEKASATKTKVERSNNQLRDLIKQIREFLTQEGADPDSIEAIANHVLELSIPASPL
QIRLLADEIKDRVRSLANVNNILQETEEDVRGAERLLLDAKRARHHAEGVKTAAETVTQA
LLDAQTAQTSAEKAIARARTDIGDTENRLAEIESETTTSEKDLDDAVGRLGTLGHQINLL
KTKRANNSMAAARAEETATMARDKANEAVQILDGQLMDKFNEVQQRVDTKAKVVLDAKKK
AEGIREEAKELLKDAQDKLQRLAELEKSYEENQRRLEGKARQLDGLEEKMRGILHDINKQ
IRIYNTCQ
NT seq
5427 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcctcgccggtccttctcttctgcgccctggcggcggccgtggcccaggagccg
gaccacagccacggctgcgcccacggcagctgttacccggcaaccggagacctgctggtg
ggccgggagaagagcctgaaggcctcgtccacctgcgggatgatccggaaggatccgtac
tgcatcgtcagccacctgcaggatgagaagaagtgtttcgagtgcgactcccggcggccg
tacgaccccgtctacaacaccatcaaccaccggatcgagaacgtcatcaccaccttcaaa
ccgcaccggaagaactgctggtggcagtcggagaacgggaaggcggacgttttcatccag
ctggacctggaggccgagtttcacttcacccacctgatcatgacgttcaagacgttccgg
ccggcggccatgctgatcgagcggtcggcggacttcggccggacctggcaggtttaccgc
tacttcgcccacgactgcgccgccgcgttcccgggaatcttccagggaccgctgagcaac
gtcaacgacgtcgtctgtgagtcgcgctactccgacatcgagccgtcgtcggagggagag
gtcatctacaaggttctcgacccggccatcaggatccaggacccgtacagccccgacatc
cagaaccagctgaagatcaccaacctgagggtgaacttcaccaagctgcacacgctgggg
gacaacctgctggacccgcgggccgagatcaaggagaagtattactacgccgtgtacgag
ctggtcgtccgcgggaactgcttctgctacggacacgcgtccgagtgcgcgcccatcgac
ggcatccggggagacatcgagggcatggttcacgggcgctgcgtctgcaaccacaacacc
aaggggctgaactgtgagctgtgtgacgacttctacaacgacctcccctggaggccggcg
gagggacggaacacccacgcctgcaagaaatgcaactgcaacggccactccagccggtgc
cacttcgacatggccgtgtttctggccaccggtaacggcagcgggggcgtctgcgacgac
tgccagcacaacacggccgggaggaactgtgagacctgcaaacccttctactacaaggac
ccgagccgggacatcagggacccacgggtctgtctggcgtgcgactgcgaccccgacggc
tcccaggacggcggcctctgcgacggcggcaccgacacggtcctgggctcagaggcgggt
cgctgccgctgcaagagcaacgtggaggggccgcgctgcgacaagtgcaggaccgggttc
ttcgggctcagcgccgacaacctgcagggctgccagccctgccagtgcgacccccgggga
accgtgtccatcagctcccagtgtgacccggtcagcggagactgtttctgcaaacggctc
gtgacgggacggagctgcgaccagtgtctgcccgagcactggggcctgaaccacgacctg
aacggctgcagaggctgcgagtgcgacgtcgggggggcgctagacaaccactgctccatg
gacaacggccagtgtcgctgccgcagtcacatgaccggccgccagtgcacccaggtggat
tctgggtacttcttcatggccctggaccacttcctgtacgaggccgagttcgccaccatg
ggagggggcagcacagtggagacccgggagcaccagccgggtcgtcccgccacctggacc
gacctgggctttgctctggtccccgaaggaggaactctggagttccagatcagcaacatt
ccgttctccatggagtacgagctgctgctgcgctacgagacgcagatgccgcgggactgg
gaggaggttcggatctcggtggtgcgtccgggtccgatcccgaccagcagcccgtgtgga
aacaccatccccgacgacgaccggctaacggcagcgctgccggccgggtcccggttcctg
gtggtcccgcggcccgtgtgcctggaggccggactgacctacacgctccggctggagttc
acccgctaccaggacgccaacagcatccagaccgggggggcctacgccgggggggccgga
ggggccgggggggcctacgccgtcctgctggtggactcgatcgccctgatgccgcgtcac
gtttccatggagatgttcaacgccggcgaccccggctccaccgcccggcggcagagctac
gagcgctaccgctgccacgagggcgccaagggcgtgatccggccggccatgagcgacacc
tgcgccaagctgatcagcagcatgtcggccgtcatcaacgacggggctctgccctgtaac
tgcgacccccagggctccctcagctctctgtgtgacgtccgggggggtcagtgccgctgc
aagcccaacgtgatcggccggcgctgccaccagtgttccccgggaacctacggcttcgga
ccgtctggctgctccgcctgcggttgcagcctggaaggctcagtgagccggttctgcgac
gagtcgtcgggccagtgcccgtgccggcccggggccttcgggccgcgctgcgacggctgc
cagacgggtcactggggcttccccagctgccgggcctgccactgcaacggccacgccgac
cactgcgaccagcggagcggagcctgcatcggctgcagggacaacaccggaggagacaag
tgtgacaggtgtgctgacggttactacggtaacccggttctgggcggggcctccagcggg
cagtgccggccctgcccctgccccgacggacccgacagcgggcgacacttcgccacgtcc
tgttaccaggacaaccgcaaccggcagatcatctgcaactgcaaccagggctacaccggg
attgttaaacgctccggggtgaccgtttttaagcgggcccggtgcgaggagtgtgctccc
ggttactacggcaacccgtcccagccgggcggccgctgccagccctgccagtgcaacaac
aacatcgacatgtcggacatggagtcctgcgaccggcgcaccggcgcctgcaggaagtgc
ctgtacaacacggagggcgacgcctgcggcgtctgccggagcggatacttcggagacgcg
gcgcggcgcaactgcaggaagtgcacgtgtaacttcctggggacggagctcagccagtgc
atggagcgcggcgactgcgtgtgccagcgggcctcgggccagtgccagtgccggcccaac
gtggtgggcctgtcatgtgatcactgcgcccccaaccactggaacatgggcgggggcgcc
ggctgccagccctgcgactgcgaccccaacaactcggtcacgtcgtcgtgcaacgagttc
agcggtcagtgtcagtgccgcgacggcttcggggggacgacctgccgggactgccaggag
aacttctggggagacccacggatccagtgcagagcgtgcgactgcgactggcgcggcatc
gagacgccgcagtgcagccgggcgacgggccactgcgcctgcaagccgggcgtgtcgggc
gtgcgctgcgaccagtgcgcccgcgggttctccggccagttcccccactgccagccctgc
caccagtgcttcggggactgggaccgcatcgtgcaggacctggcggttcgcaccaagacc
ctggcggagcgggcccacgagatccagagcaccggcctcaccgggccctacgagaagttc
ttcaaggccctggaggagaagctggcgcgggcccagggcatcgtcaacgcccgcaacgcc
accgccgccgccgtggggaccctgatggagctgatcgaggacctcagggctcacatcggc
gagacgacggacaccctgaaccggctggagggcgacctgacgctggtccaggacggcagc
tcggaggcggggaaggagctgagcgcgctggagcgcgaggcccgggagctgaacctcagc
tcggcgctgctgcaccggcagctggacgtcctgaagaactccaacttcctgggggcgttc
gacagcatccgtagctcctacaacgtctcccgcgacgccgagcgccgcgccaacgcgtcc
accgtggcccggcccagcaccgtcagccgctccgccgacacgcgccgccgcaccgagcgc
ctcatcgccgccaagaaggacgacttcaaccgcaagaactcggccaacaagcgggcgctg
ggagacctgagcgtccgggcacaggaactggacctgaagacgatcaacgagaaggtctgc
ggagagcccggcgacgccccctgcggggagagcccgtgtggaggggccggttgccgcgac
gacgaggggaaccgccactgcggaggcctgaactgcaacggcgccgtggcggcggcggag
aacgccctggagcgggccggccgggccgagaccaagctgggccgagccgtggaggagatg
cagggactcttcagcaaggtggccgaggcgaagtcccaggcggaggatgcgcggagcaga
gcccgggcagcgctggaaaaagcctcggccaccaagaccaaggtggagagatccaacaac
cagctgagagacctgatcaagcagatccgggagttcctcacgcaggagggggccgacccc
gacagcatcgaggcgatagccaaccacgtgctggaactctccatcccggcgtcgccgctg
cagatccggctcctggccgacgagatcaaggaccgggtccggagtctggccaacgtcaac
aacatcctgcaggagacggaggaggacgtgaggggggcagagcggctgctgctggacgcc
aagagagctcggcaccacgccgagggcgtgaagacggccgccgagacggtgacccaggcc
ctgctggacgcccagacggcccagacctcggcggagaaggccatcgcccgggccaggacc
gacatcggggacacggagaaccggctggcagagatcgagtcggagacgaccaccagcgag
aaggacctggacgacgccgtgggccggctgggcacgctgggccaccagatcaacctgctg
aagaccaaacgggccaacaacagcatggcggcggcccgggccgaggagacggccaccatg
gcccgggacaaggccaacgaggcggtgcagatcctggatggccagctgatggataagttc
aacgaggtgcagcagcgggtcgacaccaaggccaaggtggtgctggacgccaagaagaag
gccgagggaatccgggaggaggccaaggagctgctgaaggacgctcaggacaagctgcag
cggctagcagagctggagaagagctacgaggagaaccagcggcggctggagggaaaggcc
cggcagctggacgggctggaggagaagatgaggggaatcctgcacgacatcaacaagcag
atccggatctacaacacctgccagtaa
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integrated database retrieval system
