Cololabis saira (Pacific saury): 133457516 Help Entry 133457516         CDS       T09849                                  Name (RefSeq) collagen alpha-1(XX) chain   KO K24357   collagen type XX alpha Organism csai  Cololabis saira (Pacific saury) SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 VWA Collagen Pur_ac_phosph_N VWA_2 Ig_DSCAM-DSCAML_C FN3_Tor_3rd NDNF YjeF_N Motif Other DBs NCBI-GeneID:  133457516 NCBI-ProteinID:  XP_061592845 LinkDB All DBs Position 12:44330369..44402644 Genome browser AA seq 1558 aa AA seqDB search MSPPLLSWTPPPLRLMLLLLAVLLLSSGVHGQGRLKLTVVSEDRLQMKWKEADGPVQGYK VRVRAVSELPQPELMLTTLRGRATVAGLDSSQEYWLQVFVLNGTTEKLLAKRRFTMAVLR QEEMIRSGSRDQKKKVLPGGSGSGDPEETETLLEPTVLYPDHTTTTAAADPPTEETPFQL EDRTRKDKRKRKKEREGGKEEKEEEKPQRTPAPTRTDTGASPRRPYECRSDAAADVVLLV DGSWSIGRTNFRRVRDFLEGLVTPFRIGPDHVQIGLTQYSGDPRTEWQLGNFSSKEQLLE AVRSFRYKGGNTFTGQALIHVMQQNLQAEGGARPDTPSFLVLLTDGKSQDDAIGAASRLK NAGVEIIAVGVKNADEAELRQVASEPLDLNVYNVNDFPLLSRLVGRLVHILCGKIQDRGK RPAPAPTPDPALSYPSPSDLRFSRLGSREVTLHWTNPPKPVQQYRVVFHSAEGQSPQEVV LAGSESSVRLDGLSSQTLYHVSIFPVFSANVGVALRGTVTTLPLAVPADLAVVPSSYGSL SVSWSSAPGADQYLVLYSALSHGEPDDAKEDKFGPDQTRVELDGLLPETDYSVTLYALYD DDPSDPVTAVATTLPLPAPLGLQFPVVSHSVMRVSWTPGAADVPGHRITYSTNHGSDVKQ VEVTGLNSALVQNLSSLSRYLVSVQSHYPEGLSAAVTNNVTTLKVPSPSDLRVTNFSGGD ITVRWAAAADDVDFYLIKWISLGGGDLRQLRVGGDGEGATLEGVEDEKEYQISLSALYGD GAQSEAVATRYSTLSGGGPSSITVSEETPVSLLVSWVPPNAHVLQYRVSYTALTGAEAQD SMVVVPGGRQQVALQALQPDTRYSILVTAEYRNREGGSGSAQGKTTSLRVSSVSVVRSDH SSICVSWRPVSAVDGYRLVIQGVKDKLVKQEVVDESSSSFCFSDLQPETLYRISVHSLLG SAEGAAVSILHPTATAPARSSLHPNLYPIHNEVCPEVKIRNSLVKGFDMMEAFGLTPSAH SSVDGVAAEPFVFNVLPTYTVFRDVQLTQSTRFIHPAGFSPEHTISISFRLLQDTPREAF ALWQLTDNDFQPRMGVVIDPSTKQLLYFSLDYRGEVQELTFDQPQVHRLFYGSFHKVHLS VSQVGVALSVDCQHVGERPARPLGNLPTDGFEMLGKLVKTRGPNSGSAPFQLQSFEIVCN ITWASDDTCCDLPGLRDEESCPAPAHTCTCTSDVPGAAGDPGPNGKPGPRGEKGEKGEQG HKGETGPPGKPGFGGGLGPVGGIGPRGMTVQGKVGPPGARGGKGEPGRPGLQGLQGDPGP KGDEGFPGSKGIRGPEGNMGPPGETGPRGFQGMPGHPGPGADKGPPGPVGPTGLPGNKGE RGEKGDQQSMAAIYQLVTQACEQLIHKEVLKLDMFINDIGRKPVPVEEPVGPPGEPGVPG AMGPPGGRGTQGKVGTRGRSGRPGYPGEQGRRGFHGQKGDSGKKAQGPPGIKGFAGLPGE SVLGAAGSTGDDGKPGPPGVPGPLGQQGEIGPPGVCDSSGGCQPGPPLTDDPYYGYEP NT seq 4677 nt NT seq  +upstreamnt  +downstreamnt atgtccccccccctcctctcctggacgccgccccccctccggctgatgctgctgctgctc gccgtcctgctgctgtcctcaggggtccatggacaaggtcgcctgaagctgacggtggtc tccgaggaccggctgcagatgaagtggaaagaggccgacggacccgtccagggatacaag gtccgggtccgagcagtttcagaactcccccagccggagctgatgctgaccaccctgcgg ggccgggccaccgtggcgggtctggactccagccaggagtactggctgcaggtgttcgtg ctgaacggaaccacggagaagctgctggccaaacgccgcttcaccatggccgtcctgcgg caggaggagatgatccgcagcggcagccgggaccagaagaagaaggtcctgccggggggg tcggggtccggggacccggaggagacggagaccctgctggaaccgacggtgctgtacccg gatcacacgaccaccaccgctgctgcagacccccccaccgaggaaacccccttccagctg gaggacaggaccaggaaggacaagaggaagaggaagaaggagagagagggggggaaggag gagaaggaggaggagaaaccccagaggaccccggccccgactcggaccgatacaggggcg tctccacggcgaccgtacgagtgccgcagcgacgcggcggccgacgtcgtgctgctggtg gacggatcctggagcatcggacgcaccaacttcaggcgggtccgggacttcctggagggg ctggtgacgccgttccgcatcgggccggaccacgtccagatcggtctgacccagtacagc ggagacccgcggaccgagtggcagctcggaaacttcagcagcaaagagcagctgctggag gccgtgaggagcttcagatacaagggagggaacaccttcacaggacaggcgctgatccac gtcatgcagcagaacctgcaggctgaaggaggagccagacccgacacgccgtcgttcctg gtcctgctgaccgacgggaaatctcaggacgacgccatcggcgcggccagccgcctgaag aacgccggcgtggagatcatcgcagtaggcgtgaagaacgcggacgaggccgagctgcgt caggttgcctccgagccgctggacctgaacgtctacaacgtcaacgacttccctctgctg agccggctggtgggacggctggtgcacatcctgtgtgggaagatccaggaccgcggaaaa cgtccggccccggcccccaccccggaccccgccctctcctaccccagtccctcggacctg cggttctcccggctcgggtccagggaggtgacgctgcactggaccaacccgcccaagccc gtgcagcagtaccgggtcgtgttccacagcgccgagggccagagtccgcaggaggtggtc ctggccgggtccgagtcctcggtgcggctggacggcctctcgtcccagacgctctaccac gtctccatcttccccgtgttctccgccaacgtgggcgtggcgctgcgcggaaccgtcacc acactgccgctggccgtgccggccgacctggccgtggttccttcgtcctacggctctctg agcgtcagctggagctctgcccccggggccgaccagtacctggtcctgtactcggcgctg agccacggggagcccgacgacgccaaggaggacaagttcgggccggaccagacccgggtg gagctggacgggctgctgccggagaccgactactccgtcacgctgtacgccctgtacgac gatgaccccagtgaccccgtcaccgccgtggccaccacattacctctgccggcgccgctg gggctgcagttccctgtggtttcccacagcgtgatgcgggtcagctggactcccggcgcc gccgacgtgccgggtcaccggatcacctacagcaccaaccacggcagcgacgtcaagcag gtggaggtgacggggctgaactcggcgctggtccagaacctctcgtccctgtccagatac ctggtgtcggtccagtcccactacccagaaggcctttctgcagccgtcaccaacaacgtg accacactcaaggttccgtctccgtccgacctgagagtcaccaacttctccggcggtgac atcaccgtccgctgggcggcggcggccgacgacgtcgacttctacctcatcaagtggatc tcactgggcgggggagatctgagacagctgcgggtgggcggcgacggcgagggagcgact ctggagggcgtggaggacgagaaggagtaccagatctctctgtcggcgctctacggggac ggagctcagagcgaagccgtggcgacgcgatacagcaccctgtcgggcggaggaccgtcc agcatcacggtttccgaggagacgccggtcagcctgctggtcagctgggttcctcccaac gctcacgtcctgcagtaccgagtgtcgtacacggcgctgaccggagccgaggcccaggac agcatggtggtggtaccaggaggccgccagcaggtggcgctgcaggcgctgcagccggat acccgctacagcatcctggtcaccgccgagtaccggaacagggagggaggcagcggctcg gctcaagggaaaaccaccagcctgcgggtcagcagcgtcagcgtggtccggtccgaccac tccagcatctgtgtgtcctggagacccgtctctgccgtggacggataccgcctcgtcatc cagggggtcaaagacaagctggtgaagcaggaagtggtggacgagtccagcagcagcttc tgcttcagcgacctgcagccggagactctgtaccgcatcagcgttcactccctgctgggg tcagcagagggcgccgccgtgtccatcctacaccccacagccacggctccggccaggtct tccctgcacccgaacctttaccccatccacaacgaagtctgtcccgaggtgaagatcagg aacagcctggtgaaagggttcgacatgatggaggccttcggcctgacgcccagcgctcac tcgtcggtggacggcgtggcggccgagcccttcgtcttcaacgtgctgcccacgtacacc gtgttcagggacgtgcagctgacgcagagtaccaggttcatccacccggcgggtttctcc ccggaacacaccatcagcatctccttccggctgctgcaggacacgccccgggaggccttc gccctctggcagctgacggacaacgacttccagccccggatgggcgtggtgatcgacccc tccaccaagcagctgctgtacttcagcctggactaccgcggggaggtgcaggagctcacc ttcgaccagccgcaggtgcaccggctgttctacggcagcttccacaaggtgcacctgtcc gtcagccaggtgggcgtggccctgtccgtggactgccagcatgtgggcgagaggccggcc cggccgctggggaacctgcccaccgacgggttcgagatgctggggaagctggtgaagacc cgcgggcccaacagcggatcagcgccgttccagctgcagtccttcgagatcgtgtgcaac atcacgtgggcgtcggacgacacctgctgcgacctgccgggcctgagagacgaggagagc tgccccgccccggcccacacctgcacctgcacctccgacgtccccggagccgccggagac cccggaccaaacgggaagcccggccctcgaggagagaagggggagaagggcgagcaagga cataagggggagacgggacccccagggaagcccggattcggaggcggtctcggaccggtg ggcggcatcgggccccgggggatgacggtgcagggcaaagtgggtccaccgggggccagg gggggcaagggggaaccgggccgacccggactacagggtttacagggagatccgggtccg aagggggacgaaggtttccccggttccaagggcatcagaggtccggaaggaaacatgggc ccccccggggagacgggcccccggggtttccagggaatgccgggacacccgggcccaggg gccgacaagggccccccaggaccagtcggacctacgggtctgccgggaaacaaaggagaa cgaggggaaaagggggatcagcagtcgatggcggcgatctaccagctggtcactcaggcc tgcgagcagctgatccacaaggaggtgttgaagctggacatgttcatcaacgacatcggc cgtaaaccggttcccgtggaggagcccgtgggccccccaggagagccgggggtaccaggg gcgatgggccccccggggggccggggcacccagggcaaggtcggcaccaggggccggtcc gggaggcctggctatcccggagagcagggacggagagggttccacggccagaaaggggat tctgggaagaaagctcaagggcctcctgggatcaaaggattcgcaggtcttccgggggag tccgtgctcggggccgcaggttctacaggagacgatggaaaacctggacctccgggggtc cccgggcctctgggtcagcagggcgagatcggaccgccaggggtttgtgacagcagtggg ggctgccagccgggccccccgctaacagatgatccttactacggctatgagccgtga

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