Cololabis saira (Pacific saury): 133457677
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Entry
133457677 CDS
T09849
Symbol
rad54l
Name
(RefSeq) DNA repair and recombination protein RAD54-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133457677 (rad54l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csai03400
]
133457677 (rad54l)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
133457677 (rad54l)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
Rad54_N
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
133457677
NCBI-ProteinID:
XP_061592964
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Position
13:complement(5817782..5842301)
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AA seq
734 aa
AA seq
DB search
MRRSLAPSQVAKRKQGDEWTAEPEKRRKRDETKESHTSPFRKPLTQLNIRPACVDADKHE
AFIRSILSRPFKVPLPNYSGPLGIRALGLKRAGVRKALHDPFAEDALVLYEPPALSAHEL
IKADKDKVPVHVVVDPVLGKVLRPHQREGVKFLWECVTGRRIAESHGCIMADEMGLGKTL
QCIALMWTLLRQSPDATPEIDKAIVVSPSSLVRNWYNEVGKWLGGRVTPVAIDGGSKVEI
DKQLVNFISQRGLRAPTPILIISYETFRLHADVLHKGKVGLVICDEGHRLKNSDNQTYQA
LNAMKAQRRVLISGTPIQNDLLEYFSLVHFVNTGILGTAQEFKKRFEVPILKGRDADASD
KDRQTGEEKLKELISIVNRCLIRRTSDILSKYLPVKIEQVVCCRLTPLQTELYKRFLRQA
KPMESLQEGARISVSSLSSITSLKKLCNHPALIYDKCVEGEEGFEGALDLFPPGYCTKAV
EPQLSGKMLVLDYILAMTKTTTSDKVVLVSNYTQTLDLFEKLCRSRRYLYVRLDGTMSIK
KRAKIVERFNSPSNPEFIFMLSSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRD
GQKKTCYIYRLLSTGTIEEKILQRQAHKKALSSCVVDEEQDVERHFSLGELRELFTLNEE
TSSDTHDKFRCRRCVNGTQVRPPPEDCDCTSNLSQWNHCYDKKGLRDVVLKSSWDAAVSF
VFHQRSHEEQKGVV
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgagaaggagcctggcccccagccaggtggccaagaggaagcagggagacgagtggacc
gctgaacccgagaagaggagaaaacgtgatgagaccaaggaaagccacacttctcccttc
aggaagcctctgacgcagctgaacatccggcctgcgtgtgtggatgctgacaaacatgag
gcgtttatccggagtattctctccaggcctttcaaagtccctcttccaaactactcagga
cctctgggaatcagggcgctgggcctgaaacgagccggagtgaggaaggcgcttcacgat
cccttcgcagaagacgctctggtgctctacgagcctccagctctgagcgctcacgagctg
atcaaagctgacaaggacaaggttccagtccatgttgtcgtggatccagttttaggaaag
gtgctcagacctcatcaaagagagggggtgaagttcctgtgggagtgtgtgacgggcaga
cgcatcgccgagtcccacggctgcatcatggcggacgagatgggcctggggaagaccctg
cagtgcatcgccctcatgtggaccctgctgcgccaaagccccgacgccacgccggagatc
gacaaggccatcgtggtctcgccctccagtctggttcgcaactggtacaacgaggtgggg
aagtggctgggaggacgagtcacgccggtggccatcgacggaggctccaaggttgagatt
gataagcagctggtgaacttcatctcccagcgtggtttgagggcccccaccccgatcctg
atcatttcctacgagacgttccgactgcacgccgatgttctgcacaaaggcaaagtggga
ctcgtcatctgtgacgagggccaccggctgaagaactccgacaaccagacgtaccaggcc
ctgaatgctatgaaggcccagaggagggtgctcatatcaggcacgcccatccagaacgac
ctgctggaatacttcagcctggtccactttgttaacacaggaatcctgggcacagcccag
gaatttaaaaagaggtttgaggttcccatcctcaaaggcagggatgcagatgccagtgat
aaagacagacaaaccggagaagagaaactcaaggagctgatcagcatcgtcaacaggtgt
ttgatcaggaggacgtctgacatcctgtccaagtatcttcctgtgaaaattgagcaagtg
gtgtgctgcaggctgactcctctgcagacagaactctacaagcgctttctaaggcaggcc
aaacccatggagagcctgcaggaaggggccagaataagtgtgtcctccctgtcctccatc
acatccctgaagaaactgtgcaaccacccggctctcatctatgacaagtgtgtggagggg
gaggagggctttgagggggcgctggatctgtttccccctggttactgcaccaaagctgtg
gagcctcagctgtctgggaagatgctggtcctggactacattctggccatgacgaagacc
acgaccagcgacaaagtggtgctggtctccaactacacccaaacactggacctctttgag
aagctctgcagatctagaagatacctgtacgttcgactggacggaacaatgtccatcaag
aaaagagccaagatcgtggagagattcaacagtccatctaatcccgagttcatcttcatg
ctgagcagcaaagccggcggatgtggcctgaatctgatcggcgccaaccgcctggtgatg
tttgacccggactggaacccggccaacgacgagcaagccatggcccgggtgtggagggac
ggccagaagaagacctgctacatctacaggctgctctcgacggggaccatcgaggagaag
atcctgcagagacaggcccacaagaaggccctgagcagctgcgtggtggacgaggagcag
gacgtggagcgccacttctccctcggggaactccgggagctcttcaccctcaacgaggag
accagcagtgacacccacgacaagtttcgctgccgtcgctgcgtgaacggcacgcaggtg
cggcctccaccggaggactgtgattgcaccagcaacctctctcagtggaaccactgctac
gacaagaagggcctgagggacgtggtgctcaagtcctcctgggacgctgccgtgtccttc
gtcttccaccagcgctcccacgaggagcagaagggcgtggtctag
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