Cololabis saira (Pacific saury): 133457713
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Entry
133457713 CDS
T09849
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csai04131
]
133457713 (lingo3a)
Membrane trafficking [BR:
csai04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
133457713 (lingo3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_9
LRR_6
LRR_RPS2
V-set
Cupin_1
LRRNT
Motif
Other DBs
NCBI-GeneID:
133457713
NCBI-ProteinID:
XP_061593008
LinkDB
All DBs
Position
13:11228291..11268632
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AA seq
610 aa
AA seq
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MEVNLGHDVAWLFPFLFLLLMNTVSPGQSQGCPQRCECISKMNTVSCFGKRLSALPDGIP
SETKVLDLSGNKLRWVEQGDLLSYPRLERLDLSDNMISVLEPNAFSSLQNLQSLSLRGNQ
LKLVPMGAFSHLANLTSLDLSGNKIVILLDFTFQDLKSLKNLEVGDNDLVYISNKAFLGL
IGLKELTIERCNLTSVSSQSLSYLQNLVTLRLRYLSISALEDQNFRKLGNLRGLEIDHWP
FLEYISPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSYNPISVLESWALRDL
VRLKELHLVSTNLAVVQPYALGGLRQIRLLNFSTNNLVSLEEGAFQSVNTLETLRLDRNP
LACDCRLLWILQRRKTLNFDGASPVCVAPVEVQGRALNAFSDSALFDHFTCQKPKIRNRK
LQQISAREGQVVSFICKAEGEPTPAIFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQVT
DSGTYICIASNAGGNDTYFATLTVSGLPLDAALMANRMYYTGDLNDTNLNDTRVFLKFTL
DLKTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQG
GARKFNMKMI
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaacttgggtcatgacgtagcctggctctttcctttcctgttcctgctgctg
atgaacacagtgtcgcccggtcaaagccaaggatgcccccagcgttgcgagtgcatttct
aagatgaataccgtgtcctgctttggtaaacgtctgtccgcgttgccggatggaatccca
tcggaaaccaaggtcttggacctaagtgggaataaactccgttgggtagaacagggggat
ctgctttcatatccgcgcctcgagaggctggacttgagtgataacatgataagtgtcctg
gagcctaacgctttttctagtctccagaacctgcagtcactttcactgaggggtaaccag
ttaaagctggtccccatgggggctttctcccatctcgccaacttaacttcattagacctt
agtggaaataagattgtgattcttttggactttactttccaagatttgaaaagcctgaag
aacctggaggttggagacaatgatctggtctacatttccaataaggccttcctggggcta
ataggactcaaggagctgaccattgagaggtgcaacttgacttcggtgtccagccagtct
ttgtcatacctacagaaccttgtgacgctacggctccgctacctcagtatctccgcctta
gaggaccagaacttccgcaagctgggaaacttgaggggcctggagattgatcactggccc
tttctggagtacatctctcctcacagcttgcagggtcttaatttgtcttggctgtccatt
acgcacaccaacatcacctctgtgcccacctccgctctgcgcagtctggctcacctcacc
agcctcaacctctcttacaacccaatctctgtgttggagtcctgggctctgcgggatctc
gtcaggctgaaggagctccatctcgtgagcactaacctggcagtagtgcagccttatgca
ctcggtggtctcagacaaatccgccttcttaacttttctactaacaatctggtgagcctg
gaagagggagcttttcagtccgtcaacaccctggagactctgcgtttggacagaaaccct
ctggcctgtgactgccgcttgctttggatcctccagcgcaggaagaccctcaattttgac
ggcgcctcccccgtgtgtgtcgcacctgtcgaggtgcaaggacgggctctcaacgctttc
tctgactcggccctcttcgatcactttacctgccagaagccaaaaatccgcaacaggaaa
ctgcagcaaatatctgcccgtgaggggcaggtcgtctcgtttatttgtaaagcagaaggc
gagccaacgccggcgatattttggatttctcctcagcgccgccggataaccacaaagagt
agcggccgattaactgtactaccagaaggcacgctggaaatacggtacgcccaggtaaca
gatagtggaacgtacatctgcatagctagcaacgctggaggaaatgacacttattttgcc
acacttacagtaagcgggctgccgctagacgcagccctcatggccaaccgtatgtattat
actggggaccttaatgacacaaatctgaacgataccagagtcttcttaaagttcactctc
gacctgaagaccatcctcatatctacggccatgggctgtatcatgtttctgggagtggtc
ctgttctgcttcatactgttgtttgtgtggagtcgaggcagaggacagcacaaaaacaat
ttctcagtggaatattctttcagaaaagttgacggacctgcagccagtggcgggcagggt
ggagcgcgcaagttcaacatgaaaatgatctga
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