Cololabis saira (Pacific saury): 133457825
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Entry
133457825 CDS
T09849
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03460
Fanconi anemia pathway
csai04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
133457825 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133457825 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
csai03000
]
133457825 (her6)
03400 DNA repair and recombination proteins [BR:
csai03400
]
133457825 (her6)
Transcription factors [BR:
csai03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
133457825 (her6)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
133457825 (her6)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NCOA
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
133457825
NCBI-ProteinID:
XP_061593152
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All DBs
Position
13:25431290..25433115
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AA seq
280 aa
AA seq
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MPADMMEKTSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLANCMTQINAMNYPSQHQHQHQHQLPPAGGPTHPSFGQ
SMVQIPSSPPQVLPINPATSCKGGSSPSSLPSDGTKVYGGFQIVPATDGQFAFLIPNAAF
APNGPVIPVYANSVSTPVPVPAAVSPGAPSANSDSVWRPW
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgatatgatggaaaagacttcttcctctccggtcgctgcgactccagcgagc
atgaacaccactcccgataaacccaagacagcatccgaacacagaaagtcatcaaagcca
atcatggaaaagaggagaagagctagaatcaacgagagcttgggtcaactgaaaactctc
atcctggatgctctcaaaaaagatagctccagacactctaaactggagaaggcggacatc
ctggagatgacggtgaagcatctccggaacctccagagggttcagatgaccgctgccctg
aacaccgaccccaccgtcttggggaaatatcgcgctggattcagtgaatgcatgaatgaa
gtcacccggttcctgtccacctgcgagggcgtcaacaccgaggtcaggacgcggctcctg
ggtcacctggccaactgcatgacccagatcaacgccatgaactaccccagccagcatcag
caccagcaccagcaccagctccctccggccggcgggcccacgcacccgtccttcggccag
tccatggtgcagatccccagctcgcccccgcaggtcctccccatcaaccccgcaacgtcc
tgcaaagggggctcctcgccgtcctcgctaccttcagacggcaccaaagtgtacggcggg
tttcagatcgtgcctgccacagacggacagtttgctttcctcatacccaatgcggcgttt
gcgccgaacggccccgtgattcccgtttacgccaacagcgtcagcacgccggtgccggtg
ccggccgcggtttcccccggagcgccttcagccaactcggattccgtgtggcggccgtgg
tga
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