Cololabis saira (Pacific saury): 133457932
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Entry
133457932 CDS
T09849
Symbol
prpf38a
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133457932 (prpf38a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csai03041
]
133457932 (prpf38a)
Spliceosome [BR:
csai03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
133457932 (prpf38a)
Complex C
U4/U6.U5 tri-SnRNP related factors
133457932 (prpf38a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
133457932
NCBI-ProteinID:
XP_061593302
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All DBs
Position
13:complement(44494205..44508578)
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AA seq
310 aa
AA seq
DB search
MANRTVKDANSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKFVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRLLGAMYMRLTGTATDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHGERVCDIILPRLQKRQVLEEAEMLDPR
ISALEEDLDEVESSEEEDEEEEKPERMQTPEPHRRGYRDNDRPRRSPSPRYRRSRSPRRR
SRSPKRERRSPSPRHRHRSKSPRRHRSRSRDRRHRSKSPGHHRSHRHRSHSKSPERSSKK
SHKKSRRGND
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaggaccgtgaaagatgccaacagcatccacggaaccaacccccagtacctg
gtggagaaaatcatccggaccagaatctacgagtccaagtactggaaggaggagtgtttc
ggcctgacggctgagctggtggtggacaaggccatggagctgaagttcgtgggaggcgtc
tacggaggaaacatcaagcccacgccgttcctctgcctcacgctgaagatgctgcagatc
cagccggagaaggacatcatcgtggagttcatcaaaaacgaggatttcaaatacgtgcgt
ctgctgggagccatgtacatgcgtctgaccggcacggccacggactgctacaaatacctg
gagccgctttacaacgactatcggaagatcaagagccagaaccggaacggagagttcgag
ctgatgcacgtggacgagttcatcgacgagcttctccacggagagagagtctgtgacatc
atcctgccccgactccagaagagacaagtcctggaggaggcggagatgctggacccgcgg
atcagcgcgctggaggaagatctggacgaggtggagagcagcgaggaggaggacgaggag
gaagagaagccggagagaatgcagacccctgaacctcacagacgcggttaccgtgacaac
gacagacctcgccgctcgccgtcgccgcgctacagacgcagccgatcgccccgacggagg
agcagatctccgaagagagagagacggagcccgtctcctcgccaccgtcatcgcagcaag
agtccccgcagacaccgcagccggtccagggaccgccggcaccggtccaagtcccccggt
caccacagaagccaccgacatcgcagccactccaagtctccagagaggagctccaaaaag
agccacaagaagagccggcgaggaaacgactga
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integrated database retrieval system
