Cololabis saira (Pacific saury): 133457954
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Entry
133457954 CDS
T09849
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai03030
DNA replication
csai03410
Base excision repair
csai03420
Nucleotide excision repair
csai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133457954 (rfc4)
03410 Base excision repair
133457954 (rfc4)
03420 Nucleotide excision repair
133457954 (rfc4)
03430 Mismatch repair
133457954 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csai03032
]
133457954 (rfc4)
03036 Chromosome and associated proteins [BR:
csai03036
]
133457954 (rfc4)
03400 DNA repair and recombination proteins [BR:
csai03400
]
133457954 (rfc4)
DNA replication proteins [BR:
csai03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
133457954 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
133457954 (rfc4)
Chromosome and associated proteins [BR:
csai03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
133457954 (rfc4)
DNA repair and recombination proteins [BR:
csai03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
133457954 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
133457954 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
Rad17
AAA_assoc_2
AAA_22
AAA_16
DUF815
AAA_11
AAA_30
AAA_14
Mg_chelatase
RuvB_N
Gp44_lid
AAA_24
AAA_19
SLFN-g3_helicase
ResIII
AAA_5
DNAX_ATPase_lid
AAA_7
Kinesin
bpMoxR
Motif
Other DBs
NCBI-GeneID:
133457954
NCBI-ProteinID:
XP_061593334
LinkDB
All DBs
Position
13:1639530..1675014
Genome browser
AA seq
356 aa
AA seq
DB search
MQAFLKGATAPVSRAPRDKAAAASSEKKAKAVPWVEKYRPKCIDEVAFQEEVVAVLKKSL
EGADLPNLLFYGPPGTGKTSTILAAAKELYGPQLYRQRVLELNASDERGIQVIREKVKNF
AQLTVSGTRPDGKPCPPFKIIILDEADSMTGPAQAALRRTMEKESRTTRFCLICNYISRI
IEPLTSRCSKFRFKPLANQIQEERLLEICEKEKLQYTEESIAALVQVSEGDLRKAITFLQ
SVARLSGNKEITVGAVVEIAGVVPSPMIHSLLQICFRGTFENLEVVLKNTVDEGYAATQI
LNQLLDSIIEQDLPDKNKSAITEKMAVVSKCLSDGADEYLQMLSLCSVIMQQASQA
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcctttctgaaaggagcaaccgctccagtgagcagagctccgagggacaaggca
gcagcagccagctccgaaaaaaaagccaaggctgttccctgggtggaaaaatatagacca
aaatgtattgatgaggtggccttccaggaggaggttgtagcggttctgaagaaatctttg
gaaggagctgatcttcccaacctgctcttctacggtcctcctggaacaggaaagacgtcc
accatcttagctgctgccaaagaactttatggtcctcagctgtacagacagagggtgttg
gagctgaatgcttccgatgaaagaggcatccaggtcatccgggagaaagtcaagaacttt
gctcagctcacggtgtccgggactcgtcctgacgggaagccgtgtcctccgtttaagatc
atcatcctggacgaagccgactccatgacggggccggcccaggctgctctcagacgcacc
atggagaaggagtctcgtaccacccgcttctgtctcatctgcaactacatcagcaggatc
atcgagcctctcacatccagatgttccaagtttcgtttcaaacctttggccaaccagatc
caggaagagcgtctcctggagatctgtgagaaagagaagctccagtacacggaggagagt
atagcggcgttggtgcaagtgtccgaaggagacctgaggaaagccatcacatttctccag
agtgttgctcggctcagcggtaacaaagaaatcaccgttggtgccgtggttgagatagca
ggggtcgttccctccccgatgatccactccctgctccagatctgcttcagaggaacattt
gagaatctagaggtcgtgctcaagaacacggtggacgaaggctacgcagccacccagatc
ctgaaccagctgctggactccatcatagagcaggatctcccggacaagaacaagtctgcc
atcacagagaagatggcggttgtgagtaagtgtctgtccgacggagcagatgaatatctg
cagatgttgagtctgtgctccgtcatcatgcagcaggccagccaggcctag
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integrated database retrieval system