Cololabis saira (Pacific saury): 133457967
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Entry
133457967 CDS
T09849
Name
(RefSeq) desmoglein-2-like protein isoform X1
KO
K07597
desmoglein 2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04382
Cornified envelope formation
csai04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
133457967
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133457967
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csai04515
]
133457967
Cell adhesion molecules [BR:
csai04515
]
Cadherins
Major cadherins
133457967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
133457967
NCBI-ProteinID:
XP_061593359
LinkDB
All DBs
Position
13:complement(3602289..3636136)
Genome browser
AA seq
1455 aa
AA seq
DB search
MARFSCPELSLLLLLLLLLTNNVEANDKRMKTLKRAKRNWLPPPSRLVENTNHTGIIAKI
RSDKDTQGSVEYFLTGHGADRPPYNLFVVDHNNGHVRLTGVLDREKCAVYHLKGTARFLD
GTTAEDDIPLIINVLDQNDNPPFFELHSGNITETSKKGTFVMQIEGKDADEPGTINSEIA
YKIISQEPKGTGHMFTLDKKTGKLYVKEPTLDRETYDFYKLVIMGTDMGGGPGGLTGTGT
VEIKVLDINDNIPTLEKSEYSGSVDENVADVVVMRIKALDKDLEHTDNWLTVFEIAKGNE
DNLFSIETDKETNEGILKLIKAVDFEELQNLELGLLVKNVAPFAKGGPLLMDVDVQAGAG
AGAGVGVGVGAGAGAGVDVDVGVDVGVDVDVGVNVGVDLDVGVDVGVDVDVGVDVGVDLD
VDLDAGVDVGLDAGLKPQGGPGPGVGVNPGGGPATGAGAGVGVGPGVGPGVGVGVAPGVG
PGVGPGVGVGLKPGVKPGPGKKPKPKKPAKSYPIKISVNNVPEGPAFLPSTKNVPVSEDP
DELPENGTLTVFAATNPDTGKPAEDVNYAKAFDPDNWFTVDEDTAEIKLNKAPDRESPFL
VNGVYIAKILAMTKDIPSKTATGTIAIQVTDSNDHCPTLATTHTSLCSDKKTVYVTGFDE
DFSPNAAPFTFTIIPDGTKGTWDPEVINETTVALHSQEELWPGTYELQIEVMDAQGLACP
ANEVFSVDVCTCEGREDCSVMADRLETTASKVSGGVIGLVLSAFCLLLFLPLFLLFCQCG
GANTVFADQFTDLPFDTKEHLISYHTEGLGEDQEVPLQSVPILQGTQQKIGTAQGLNFNS
ISSTVVDSFKTQTYNHQFMDNDNAYRFSTDFYHGDGTATFRHMYGEQQSTNLYEEDIALP
DEFLSYYYSKKSVFAVTGKDGLLEYDFEGQGSSAGSVGCCSLLESDHDLDFLNDLGEKFM
TLAEICFPPTPTPKPSQTFKTTGAFKTTVDAVKPVSKTRVEQVLGAKHSVVKTEKVISST
NISKSSLNTVSNSSSSMTLPHPRVTNISKSSLNTVSNGSSSMTLPHPSVTNISKSSLNTV
SNGSSSMTLPRSSVTNIGHSSNIVHSANLSYAPQTVVLQQQPVYYTTTPVLQPMSYVVSQ
GTSLPGMFLVNGPQVPSDLVISGTQNPLPGLVVQNAEGSRSVNISAGPMSPVSPTVFPGL
VVQNAEGSGTLTRTLNSSAGPMGPVTPTVFPGIVIQNAEGSGTLTRTLNSSAGPMGPVTQ
TVFAGLVTQNAEGSRTLNRTLNSSVGVTGPVGPVTPTVLLPDNPARIQGSVAMEGWTIMG
PNPDGKYMLVPGSPQGILPGDAILDEGAATPQRVLYLAAQKTLYHCFEGHAFAIKGVVVA
LKRYLGQIKKVGLGAYTFFRYLVAVMPKEGQSRIHISMVGTAGTDQIRFKGNNPIKGSFV
LFYFLFYGILVSRTS
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggctcggttttcctgcccagagttgagcctgctgcttctgttactgctgctcttgaca
aacaatgttgaagcaaatgacaagaggatgaagacactgaagagggcaaagagaaattgg
ctccctcccccatccagactggtggagaacaccaaccacactggaatcatcgcaaagatt
cgctctgacaaagacacacaaggaagtgtggagtacttcctcacaggacatggagctgac
agaccaccctacaaccttttcgtggtggatcacaacaacggacatgtgcgccttactggc
gttctagaccgggaaaaatgtgctgtttaccatctaaaaggcactgctagatttctggat
gggaccacagcagaggatgacattcccctgattatcaatgtcctggatcagaatgacaac
cctcctttcttcgagctgcactctgggaatattacagagacaagcaaaaaaggaactttt
gttatgcagattgaaggtaaagatgctgatgaacctggaacgattaattcagagatcgca
tacaaaatcatcagtcaggagccaaagggaaccggtcacatgttcactttagataaaaag
acaggaaaactatatgtaaaagagcccactctggacagagagacatatgacttctacaaa
ctggtcataatgggaactgatatgggaggaggaccaggaggtctaacagggacagggacc
gtggagataaaggtcctagatataaatgacaacattcccactctggaaaaatctgagtac
agtggctcagtggatgaaaatgttgctgatgttgttgtgatgaggatcaaagctctggac
aaagaccttgaacacacagacaactggctgactgtctttgaaattgccaaaggaaatgag
gacaatctgttctccattgagacggacaaagaaaccaacgagggcatcctgaagctgatc
aaggcagtggattttgaagaactacaaaatctcgagcttggcctgctcgttaagaatgtg
gctccttttgcaaaggggggtcctctactgatggatgtggatgttcaggctggtgctggt
gctggtgctggtgttggtgttggtgttggtgctggagctggtgctggagtagatgtggat
gtgggggtagacgtgggagtagatgtggatgtgggggtaaacgtgggagtagatctggat
gtgggggtagacgtgggagtagatgtggatgtgggggtagacgtgggagtagatttagac
gtggacctggatgctggggtcgatgtcggactagatgcaggacttaaacctcaaggagga
cctggtcctggagttggggttaatcctggtggtgggcctgctactggtgctggtgctgga
gtcggagttggacctggtgttggacctggtgttggggttggagttgcacctggagttgga
cctggagttggacctggagtgggtgttggacttaagccaggcgtcaaaccaggaccagga
aaaaagccgaaacccaaaaaaccagccaaaagctatcctattaagatatcagtgaataat
gttccagaaggtccagcattccttcccagcaccaagaacgttcctgtgtctgaggaccca
gatgagttaccagaaaatggcaccctcactgtgtttgctgctactaatccagatacagga
aaaccagcggaagatgtcaattatgccaaagcctttgatccagacaactggtttactgtt
gatgaagacacagctgaaattaaactcaacaaggctccagaccgagagtcacccttcttg
gtaaacggtgtctacattgccaaaattctggccatgaccaaagatataccatcgaagacg
gccacgggaacaatagccatccaagtcactgactccaacgaccactgtcctactttggcc
accacacacaccagcctgtgctcagataaaaaaacagtctatgttactggttttgatgaa
gacttcagtcccaacgcagctccattcacattcacaatcatacctgatggtacaaaaggc
acctgggatccagaagtcatcaatgaaacgacggtagcacttcattctcaggaggagctg
tggcctggtacatatgagctccagatagaggtgatggatgctcagggcctggcctgtcca
gccaatgaagttttttctgtggacgtatgcacctgtgagggaagagaggactgcagtgtg
atggcagacagactagaaaccacggcctctaaggtctctggaggagtcatcggcctggtc
ctatcagcattctgcttactgctgttcctgcctctttttctgctgttctgtcagtgtgga
ggagcaaatacagttttcgctgaccagttcactgatctaccatttgacaccaaagaacat
ctgatatcctatcacactgaaggactaggagaggatcaggaagtgcctctccaaagtgtt
cctattctacagggtacccaacaaaaaattgggacagcacaaggactaaatttcaactcc
atctcgtcaacagtggtggacagctttaagacacaaacctacaaccaccaattcatggac
aatgacaacgcctacaggttttccacagatttttaccatggtgatggcactgctacattc
agacatatgtatggtgaacaacagtcaacaaacctctatgaggaggacatcgcccttcct
gatgagttcctcagctactactactccaagaaatcagtgttcgctgtgacagggaaagac
ggtctgttggagtatgattttgaaggccagggctcctccgctggctcagtgggctgctgc
agcctcctggagtctgaccatgatctggacttcctcaatgaccttggagaaaagttcatg
actctggctgagatctgtttccctccaacaccgacacccaaaccctcccagacatttaaa
acaacaggtgctttcaaaaccacagtggatgctgttaaacctgtttcaaagaccagggtt
gagcaggtgcttggagcaaagcattctgtagtaaagacagagaaagtcatatcatccact
aacatctctaaatcatctctcaacacagtgagcaacagctcatcctccatgacacttcct
caccccagagttactaacatctctaaatcatctctcaacacagtgagcaacggctcatct
tccatgacacttcctcaccccagtgttactaacatctctaaatcatctctcaacacagtg
agcaatggctcatcttccatgacccttcctcgctccagtgtcactaacatcggtcattcc
tctaacattgttcattctgctaacctgtcttatgctcctcagacggtcgtactgcaacag
cagccagtttactacaccaccacccctgtactgcagcccatgtcctatgttgtctcccaa
ggaaccagtcttcctgggatgtttctagtcaatggtccccaggttccatctgatcttgta
atcagtggaacccagaaccctcttccagggcttgttgtccagaatgcagagggctctaga
agtgttaatatttctgctgggcccatgagtccagtctctccgactgtgtttccagggctt
gttgtccaaaatgcagagggttctgggactcttactagaactcttaatagttctgctgga
cccatgggtccagtcactccgactgtgtttccagggattgttatccagaatgcagagggt
tctgggactcttactagaactcttaatagttctgctggacccatgggtccagtcactcag
actgtgtttgcagggcttgttacccagaatgcagaggggtcaagaactcttaacagaact
cttaatagttcagtcggagtgactggacccgtgggtccagtcactccgactgtgttgctg
cctgataatccagcaaggatccagggttcagtagccatggaaggctggacaataatggga
ccaaatcctgatggtaagtatatgttagtcccaggttcacctcagggcattttgcctgga
gatgctatcctggatgaaggggctgctacccctcagagggtgttatacttggcagcccag
aagactttgtatcattgctttgaaggtcatgcttttgctataaaaggggttgttgttgca
ctgaaaaggtatttaggacaaataaagaaagtgggcttaggggcatacacctttttcaga
tatttggtagcagtaatgccaaaagaaggacagtcacggatccatatatctatggtaggt
acagccgggactgatcagatcagatttaaaggaaataatccaataaaaggatcttttgtt
ttattttattttttgttttatggaatacttgtgagtagaacatcctag
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