Cololabis saira (Pacific saury): 133458053
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Entry
133458053 CDS
T09849
Symbol
farp2
Name
(RefSeq) FERM, ARHGEF and pleckstrin domain-containing protein 2 isoform X1
KO
K06082
FERM, RhoGEF and pleckstrin domain protein 2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
133458053 (farp2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FERM_C
FERM_M
FERM_N
FA
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
RHG20_PH
PH_11
PH_20
Spectrin_Anc-1
Motif
Other DBs
NCBI-GeneID:
133458053
NCBI-ProteinID:
XP_061593531
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All DBs
Position
13:8339443..8383649
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AA seq
1082 aa
AA seq
DB search
MGEVEGSYRVLQTPGTRLGAQFNAGISTLEPGQSLGGPAGPGTRAHGRGLQIRVQGLDDS
QEFFDIDPKALGQSLLSEVFHRGNLIESDYFGLEFQNMQMNWVWLEPTKPVAKQVRRPAN
TLFRLSVKFFPPDPGQLQEEYTRYLFSLQMKRDLMEGRLICTENTGALLASHLVQSEIGD
YDDAADRDFLRTTKLLPYQDRVQERVMELHRRHFGQTPAESDFQILEIARKLEMYGVRFH
PAADREGTKINLAVAHLGLQVFQGSTKINTFNWSKIRKLSFKRKRFLIKLHPEVHGPHQD
TLEFLMSSRDQCKVFWKVCVEYHSFFRLLDQPMPKTKAVLFTRGSSFRYSGRTQKQLVDY
VRENGVKRTPYQRRNSKIRMSARSFTSDVPKHHLSFNDSLRAPGSPSSSSVSFSPAHMSS
ILLRSELQPQPQPLSALSPSPAPTQQLQHALQQAGPPSPPKEDCVKAASPSHFSFQDTVV
DSPQLSPLTSKGPVCVSPSFQMSTLSLPSQAPSPLQSPILSEVGSNARLEEEEEGRRKRY
PTDKAYFIAKEILTTERTYLKDLEVITVWFRSAVIKENAMPEGLMTLLFSNIDPIYEFHR
GFLKELDQRLALWEGRSNAHVKGDYQRIGDVMLKNMSALKEFTSYLQKHDEVLTELEKAS
KRLKKLETVYKEFELQKVCYLPLNTFLLKPIQRLMHYKLILERLCKHYSAAHRDLDDCKE
ALKEVADIATQLQSSLIRLENFQKLTELQRDLIGIENLTAPGRVSAPTQGRGQGEQLHLL
TAASDRRSLSQEFIREGCLYKLTKKGLQQRMFFLFSDQLLYTSKGVTATNQFKVHGQLPL
HGMIVEESENEWSVPHCFTIYSAQRTIVVAASSKVEMGKWIEDLNMAIDLAKKSQEKSSI
FLDAGLSDHSNRSSDEVSLEQESEDDMNSSRTSLDRQTHHRANTTMHVCWHRNTSVSMSD
HSLAVENQLSGYLLRKFKNSNGWQKLWVVFTNFCLFFYKTHQDDFPLASLPLLGYTVSTP
EESDSIHKEYVFKLQFKSHVYFFRAESEYTFERWMEVIKSAASTTGRMSLLIPKGPMEMN
GN
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgggggaggtggagggctcgtaccgggtcctgcagacccccgggacgcggctgggagcc
cagttcaacgccgggatcagcaccctggaaccgggccagagcctgggcggccccgcggga
ccagggacccgggcccacggccggggcctgcagatccgcgtgcagggactggacgactcc
caggagttctttgacatagatccaaaggcccttggacagtctctcctttctgaggttttc
cacagaggcaacctcattgagagtgattactttggcctcgagtttcagaacatgcagatg
aactgggtttggctggaacccaccaaacccgttgcaaagcaagttagaaggccagcaaat
acactgttcagactgtctgttaaattctttccgcctgaccccggtcaactgcaagaagaa
tacacaaggtacttattctccctgcaaatgaaaagggatctgatggagggcaggttgatc
tgcacagaaaacactggagctctgttggcctctcaccttgttcagtcggagattggtgac
tacgatgatgcggcggacagagacttcctgaggacgaccaagctgctgccgtaccaggac
agggtgcaggagagggtcatggagctgcaccgcaggcacttcggccagactcctgctgaa
tccgacttccagatcctagagatcgcccgtaagctggaaatgtacggcgtccgcttccac
ccggcagccgaccgggagggcacgaagatcaacctggccgtggctcatctgggactgcag
gtttttcagggcagcaccaaaataaatacctttaattggtccaagattcgcaaactgagc
ttcaaaagaaaacggtttctgatcaagcttcacccagaggtccatggcccccatcaagac
actctggagtttctgatgtccagtcgggatcagtgtaaggtcttctggaaggtctgcgtg
gaataccactccttcttccgcctgcttgatcagcccatgcccaaaaccaaagcagtcctg
ttcactcgaggttcctccttcagatacagtggaaggacccagaagcagctggtggactac
gtgagggagaacggcgtgaagagaaccccgtaccagaggaggaacagtaagatcaggatg
tctgctcgctccttcacatcagatgtgccaaagcatcacttgtcattcaatgacagtctc
agggcccccggctccccttcctccagtagcgtgtccttcagcccggcgcacatgtctagc
attctcctgcgatcagaactgcagccccagccccagccactgtccgccctgagcccgtct
ccagcgccgacccagcagctccagcacgccctgcagcaggcgggaccccccagcccgccg
aaggaagactgtgtcaaggccgcttccccgtcacacttctctttccaagatacggtggtg
gacagtccccagctctcacccctcacctccaagggtcccgtctgcgtgtcgccctccttc
cagatgtccaccctcagcctgcccagccaggccccgtcgcccctgcaaagccccatcctg
agtgaggtgggcagcaatgccaggctagaggaggaggaggagggaaggaggaagcgatac
cccaccgataaggcctactttattgccaaagagattctgaccacagagcggacgtacctg
aaggacctggaggtcatcaccgtgtggttccgaagtgctgtgatcaaagaaaatgccatg
cccgagggtctgatgaccctgctgttctccaacatcgaccccatctacgagttccaccga
ggcttcctgaaggagctggaccagcggctggctctgtgggaggggcgatcaaacgctcac
gtgaaaggtgattaccagaggatcggtgacgtgatgctgaagaacatgtctgctctcaag
gagttcaccagctacctgcagaaacacgatgaggtgctgacggagctggagaaagcctcc
aagaggctgaagaagctggagacggtctacaaagagtttgagttacagaaggtgtgctac
ctgcctctcaacacattcctgctgaagcccatccagcggctcatgcactacaagctcatc
ctggagcggctctgcaagcattactccgctgctcaccgggacctggatgactgcaaggag
gccctgaaggaagtggcggacatcgccactcagctccagagcagtctcattcggctggag
aacttccagaagctgacggagctgcagagagacctgattggcatcgagaacctgacggcg
ccgggccgggtgagtgcaccgacgcagggccgggggcagggggagcagctccacctgcta
acagcagcgtctgaccgtcgctctctctcacaggagttcatcagggagggatgtctgtac
aagctcaccaagaaagggctgcagcagaggatgtttttcctgttctcagaccagctcctc
tacacgagcaagggtgtcacggcaaccaaccagttcaaagtgcacggacagctgcccctc
cacggcatgatcgtggaggaaagtgagaacgagtggtccgtcccacactgtttcaccatc
tactctgctcagaggacgatcgtggtggcggccagctccaaagtggagatggggaagtgg
attgaggatctaaacatggctattgacttggccaagaagtctcaggagaaatccagtatt
ttcctggatgctggcctcagcgatcattccaaccggtcgtctgacgaggtttctctggag
caggagtcagaggatgacatgaactcctctcgcacctcactggacaggcagacgcatcac
cgtgccaacacaaccatgcatgtgtgctggcaccgcaacaccagtgtgtctatgtctgat
cacagcctggctgtggagaaccagctgtcaggttacctgctgaggaagttcaagaacagt
aacggctggcagaagctctgggtggtgttcaccaacttctgcttgttcttctacaagacc
caccaggacgacttcccgctggccagcctgccactgctcggctacacggtcagcaccccc
gaggagtcggacagcattcacaaggagtacgtcttcaagctgcagttcaagtctcacgtt
tacttcttcagagcggagagcgagtatacttttgagagatggatggaggtgatcaagagc
gcggcgagcaccacgggccggatgagcctgctcatacctaaaggccccatggagatgaat
ggaaactga
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