Cololabis saira (Pacific saury): 133458107
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Entry
133458107 CDS
T09849
Symbol
colgalt2b
Name
(RefSeq) procollagen galactosyltransferase 2
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai00310
Lysine degradation
csai00514
Other types of O-glycan biosynthesis
csai01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
133458107 (colgalt2b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
133458107 (colgalt2b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
csai01003
]
133458107 (colgalt2b)
Enzymes [BR:
csai01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
133458107 (colgalt2b)
Glycosyltransferases [BR:
csai01003
]
O-Glycan biosynthesis
O-linked Gal type
133458107 (colgalt2b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
133458107
NCBI-ProteinID:
XP_061593641
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Position
13:complement(10586620..10626649)
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AA seq
614 aa
AA seq
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MLAAGTALLLLLLAAGACAGAPEPEPPTLVQERVKPESPLLKPKVMIAIVARNAAHSLPH
YLGCIDRLEYPKARTAIWAATDHNMDNTTAILREWLKEAQHAYHYVEWRPMDEPRSYTDE
WGPKHWPPSRFNHVMKLRQAALKAARERWADYILFVDSDNLLTNPRVLDLLMAENLTLVA
PMIESRSLYSNFWCGMTPQGYYKRTPDYQPIREWKRLGCYAVPMVHSTFLLDLRRESSKD
LAFYPPHSDYSWAFDDIMVFAFSARQAGVQMYVCNREHYGFMPVPLKAQQNVDDEKESFI
HTITEALINHDIEPSEHVHAPPLTQDKMGFDEILLINLKRRLDRRTRMLKTMSSIGFRVS
LVEAVDGKALNSSQLKDLGIEMLPDYKDPYSGRVLTRGEIGCFLSHHSIWTQVIERGLQK
VLVLEDDVRFEPRFKRRIQAIMDDVDRAQLDWDLIYVGRKRMQVQQPEQSVDGVNNLVEA
DYSYWTLGYALSHQGARKLLDAQPLPKMLPVDEFLPVMFNKHPNVQYMSQFEPRDLKAFS
VEPLLIYPTHYTGEPGYISDTETSTIWDDETVDTDWDRQHARKTGQQGRIRPMAQNSVTG
ESPPPAARASRDEL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgcttgctgccggtaccgcgctgctgctgctgctcctggccgccggggcgtgcgccggc
gcgccggagccggagccgccgacgctggtgcaggagcgggtcaagcccgagtccccgctc
ctcaagcccaaggtgatgatcgccatcgtggctcgcaacgcggcgcacagcctgccgcac
tacctgggctgcatcgacaggctggagtacccgaaggcacgcaccgcgatctgggcagcg
acggaccataatatggacaacacgactgccattttaagagaatggctgaaggaggcccag
catgcctaccactatgtggagtggagaccaatggacgagcccagatcctacacagatgag
tggggcccgaagcactggcctccctccagattcaaccatgtgatgaagctgagacaggcg
gcactaaaggcagctcgggaacgatgggccgactacatactgtttgtggacagtgacaac
ctgctgaccaatcctcgggtgctggacctactgatggctgagaacctgaccttggtggct
ccgatgatagagtcccgttccctgtactccaacttctggtgtggcatgaccccacagggt
tactataagcgaacgccagactaccagccaatcagggagtggaagagactcggctgctac
gcggttcccatggtgcacagcaccttcctattggacctgcgccgtgaatccagcaaggat
ctggccttctacccacctcactcagactacagctgggcatttgacgacattatggtgttt
gcattctcggcacgtcaggcaggtgtgcagatgtatgtgtgtaacagggagcactacggt
ttcatgcccgtccctctcaaagcccagcaaaatgtggacgacgaaaaagaaagtttcata
cacaccatcacagaagctttgattaaccatgacatcgagccctcggagcacgtgcacgct
ccccccttgacgcaagacaagatgggttttgatgaaattctcctgattaacctgaaacgc
cggctggacagaagaaccaggatgttgaaaaccatgtcctccatcggctttcgtgtctca
ctggtagaagcggtggacgggaaggctctgaattcctcccagctgaaggacctgggaata
gagatgctgcccgactacaaggatccgtactctggtcgcgtcctcaccagaggggagatc
ggctgcttcctcagccatcactccatatggacacaagtgattgaacgtggcctccagaag
gttctagtcctcgaggatgacgtgaggtttgagcccaggtttaaacgaaggattcaggcc
atcatggatgatgtcgacagagcccagctggactgggacctcatctacgtgggccgaaag
cgcatgcaggtgcagcagccagaacagtcggtggacggcgtgaacaacctggtcgaggcc
gactactcctactggacgctgggatacgcactctcacatcagggagccagaaagctactg
gatgctcagcctctcccgaagatgctgcccgttgacgagttcctgcccgtcatgtttaac
aaacaccccaacgttcagtacatgtctcagtttgagcctcgggacctgaaggccttctcc
gtggagccgctgctcatctaccccacccactacaccggagagccaggatacatcagcgac
acagagacgtctaccatatgggacgatgaaaccgtggacacggactgggaccggcagcat
gcgcgcaagacgggccagcagggtcgcatccggcccatggcacaaaacagcgtgaccgga
gagtcaccgcctcctgctgctcgagcttcacgcgatgaactctga
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