Cololabis saira (Pacific saury): 133458112
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Entry
133458112 CDS
T09849
Symbol
notch2
Name
(RefSeq) neurogenic locus notch homolog protein 2
KO
K20994
Notch 2
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133458112 (notch2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
EGF_Teneurin
NOD
Ank_3
Ank_5
NODP
Ank_4
EGF_3
EGF_DL_JAG
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
133458112
NCBI-ProteinID:
XP_061593652
LinkDB
All DBs
Position
13:10734666..10790865
Genome browser
AA seq
2506 aa
AA seq
DB search
MDQIPGFSLGKLLVCVFCFLHPSLALQCVDEKAPCVNNATCLTFNNGTEYCRCVPGFLGE
YCQHKDPCQPGYCVNGGNCSVSMSAGVPVPGSASCTCPLGYTGQHCQTPQNSTCYPSNPC
ANRGVCTLLSLDKYKCECARGWTGPLCEYKDSCLSSPCANGGRCSSQSGGSYTCSCSPGY
KGPRCLNDTNECADTPSLCQNEGDCVNTPGSYKCICKPGFTGQHCESSYVPCSPSPCLNG
GTCHQSSETSYSCHCLPGFNGTNCENNIDDCPNHQCANGGTCMDGVNTYNCQCPPEWTGQ
HCTEDVDECRLQPNTCQNGGTCSNLIGSYVCVCVNGWSGLDCSENIDDCATAACSPGSTC
IDRVASFICFCPPGKTGLLCHLEDACISNPCRDGSQCDTNPISGMFNCNCPPGYEGNTCN
IDKDECSIANTNPCEHGGQCVNTEGSFTCNCVKGYAGPRCEQDVNECASSPCQNDGTCLD
RIGDYTCICMPGYEGTHCETDTNECNSSPCLNQGRCLDQVSRFVCECPAGFSGETCQIDI
DECSSTPCLNGAKCIDRPNGYDCECAEGFTGPVCEEDINDCIPPPCHHGVCKDGIATFFC
ECSPGYTGSICNIQVQECHSNPCQNRGRCIDLVNAYQCNCLPGTKGLNCEINEDDCASNP
CVYGECQDGISEYKCVCSPGYTGVTCDVEIDECKSNPCKSGGTCVDKVNGFHCLCPPGTH
APLCLSGKDHCATQPCVHGTCNEQQYGYICECEEGWVGVHCEQEKDECQSNPCQNGGICV
DRHKGHTCNCQLGFRGDNCEKNINECASGPCLNQGICRDGINSYTCECRAPFKGEHCQNE
QDPCASHPCERGGVCLPSPDYTSYTCRCPPGWQGTRCKEDVNECTRNPCKNGGRCINSQG
SYMCDCTRGYSGHNCLTDIDDCSPNPCMNGGSCVDKVASFSCDCRPGFEGERCETEVDEC
ASQPCRNGATCQDYVNSFVCNCEPGFNGIQCEHNIPECTESSCLNNGTCIDDINTFSCRC
RPGFYGVFCEYEQNECDSQPCKNGGTCTDGLGTYRCTCPVRYSGLNCQNFVNLCSQVRCH
NGGSCSQTGTSWNCHCQMGWTGLYCDVPNMSCQDFAARKGLEVESVCKNAGRCINVGNSH
RCDCQPGYTGSYCKEMVDECQSNPCRNGATCKDYQGTYECMCKPGYQGVNCEYDVDECHS
KPCLNGGTCINLINRFTCACPPGTHGLQCEVNEDDCAPKPGSSEPRCRNGGQCVDGVGRY
TCSCLPGFVGDLCEGDVNECLSGPCHAPGSLDCVELVNDYQCLCRLGYTGRHCESMVDLC
LSKPCRNEGVCSMNMSSVHGYTCSCPPGFTGFSCGEIKDYNCAKLRCQNGGRCIESSGGY
LYCQCQPGFSGPHCENAQRCSVTCRNGGTCIKDPSNPFQHSCHCPNNFYGQYCETRLSQQ
PIPNCPYPQCKQQAGDKVCDYQCNIYECQWDGGDCSLNRLWPWENCTASVPCWELFKNGK
CDQECDNPSCLFDSFECQETKTDSCKYDKYCSDHYGDDICDRSCYNEACRWDGLDCSTAI
PPNLAMGTLVIVVRLQPEELLGDLGRFLRCLSALLHTNVRVKLDDKNKPMVYPYYGKEDE
QGRHAHRSRSKRELDREVIGSEMHLEIDNRECSQTSAQCFSNTDEAASFIIAAHFRDEVP
YPLVSVESNPTVKSEVPYLMYLVGVAVVVILLILVLGMLAAKRKHKHGVLWLPDGFLANK
NDKRREPVGQDDFDMKNFKTGDGGMIDGGQNQRWLEDEVPSKKPKTEDKPLLSINMDGGV
DRREWTLQHRKAADISLTPPQAGLDADCLDVNVKGPDGFTPLMLASLRNGGGPDCSLHGE
EEEESGGDEPGPSVISDLIGQGASLISQTDRTGETALHLAARYARADAAKRLLDAGADPN
AHDNMGRTPLHAAVAADAQGVFQILIRNRATELDARMNDGTTPLILAARLAVEGMVEELI
HCHADINAVDDHGKSALHWAAAVNNVEATLVLLKNGANRDMQDNKEETPLFLAAREGSFE
AAQVLLDHYSNRDITDHLDRLPRDTAQERMHHDIVRLLDQYNLVHSPHNGPNHMAGGNSV
MCGGNGAGFINMRAGQQGKKSRRGGGGAKVGGVGGGVKELKDMKAKRRKKPAGGEGPGLG
AGVAAGNAAGTGGGTANGVKSAGGLPESSVTMSPVDSLESPHSYTGDISGSVSTTANSPP
LLSSPTSRPILPPVSHMLGQQQGWVGMSKHAYGGHMFGLIAHQMGGSHSGMGQHHGQGPM
LTPMNVTVSREQLPPIVTFQMMPPGAGQAMLKQPQGGQVQVTQSQGQNTSQGHSQQGPSH
LHCSQAMMYQVPEQMGMTHGLAHSMQHPHTVNHSSHGGMEGQSRPVPSYPPMPSPVDKYP
TPPSQHSYTTAGSEGTTPGHSAHPASEHPYLTPSPESPDPWSSSSPHSNSDWSDVTTSPT
PLGNSHHALPPSHHTHIPEQAQMQPQSQQMQPPSQQPQLGNMQVFA
NT seq
7521 nt
NT seq
+upstream
nt +downstream
nt
atggaccagattcccggtttctccctgggcaagttactagtctgtgttttctgcttcctt
cacccctctctcgcgctgcagtgtgtggacgaaaaagcgccctgtgttaacaacgccaca
tgtctgacctttaacaatggtaccgaatactgcaggtgtgtgccaggctttctcggtgag
tactgccagcacaaggacccttgtcaacctggatactgcgtgaatggagggaactgctct
gtgtccatgtcagctggtgtaccagtgccaggtagcgcttcatgcacctgccctcttggg
tacaccggacaacattgtcaaactccccagaactccacatgttacccaagcaacccctgt
gccaaccgaggtgtctgcaccctcttgtcacttgacaaatacaagtgcgagtgcgccaga
ggatggacaggtccactctgcgagtacaaggacagctgtctctctagtccctgtgccaat
ggtggaaggtgcagctcccagtctggtggaagttacacctgttcctgttctcctggctac
aaaggacctcgctgccttaatgacacaaatgaatgtgcagacacaccctctctatgccag
aatgaaggcgattgtgtcaacacccctggctcctacaagtgtatctgtaaaccagggttt
actggccagcactgtgagagctcctatgtaccttgttccccctcaccttgcctgaatgga
ggcacctgccaccagagctctgaaaccagctactcatgccactgcctcccaggttttaat
ggaaccaactgtgagaacaacattgacgattgccctaatcatcaatgtgccaatggagga
acctgcatggatggagtcaatacctataactgtcaatgccctccagagtggaccggtcag
cactgtacagaagatgtggacgagtgtcggctgcagccaaatacttgccagaatggaggc
acctgcagcaacctgataggcagttatgtctgtgtgtgtgttaatggttggagtggactg
gactgctctgagaacattgatgactgtgctacagctgcatgcagcccaggctccacctgc
atcgatcgggttgcatcttttatctgtttctgtcctcctggcaagacgggtttgctctgc
caccttgaagatgcctgtatcagtaacccctgtagagacggctcacagtgtgacaccaat
cccatcagtggcatgtttaactgtaactgtccaccaggatatgaaggcaacacctgtaac
attgacaaagatgaatgcagcattgcaaataccaacccatgcgaacatggcggtcagtgt
gtgaacactgaaggctccttcacatgcaactgtgtcaagggttatgctgggcctcgatgt
gagcaagacgtcaatgaatgtgcttcaagcccctgccagaacgatggcacttgtctggat
cgaattggagactacacctgtatttgcatgcctggttatgaggggacacattgtgaaaca
gacacaaatgagtgtaacagctccccctgtctgaaccagggtcgatgtctagaccaagtc
agtcgctttgtctgcgagtgcccagcaggcttcagtggtgaaacatgccaaatagacata
gatgaatgttccagcacaccctgtttgaatggagccaagtgtattgaccgacctaacgga
tatgattgtgaatgtgccgaaggttttactggtcctgtttgtgaggaggatatcaatgac
tgcatcccaccaccatgccaccatggtgtgtgtaaagatggcattgccaccttcttctgc
gagtgctcacctggatacacaggttccatttgcaatatccaggtccaggaatgtcacagc
aacccgtgtcagaaccgaggacgctgcattgacctagttaatgcctaccaatgtaactgt
ctcccaggaactaagggcttgaactgtgagattaatgaggatgactgtgccagcaatcct
tgtgtgtacggagagtgccaggatggcatcagtgagtacaaatgtgtgtgctcccctgga
tacacaggagtaacatgtgatgtggagatcgacgagtgcaagtccaacccatgtaagagt
ggggggacttgtgtggacaaggtgaatgggttccactgcttgtgtccgcccggcacccac
gcacctctgtgcctgtctgggaaagaccactgtgccactcagccttgcgtgcatgggaca
tgtaatgaacaacaatatgggtatatttgtgaatgtgaggaggggtgggtgggagtgcat
tgtgagcaggaaaaggatgagtgccagtcaaatccttgccaaaatggtggaatctgtgtg
gaccgacacaaaggccacacctgtaattgccagctaggattcagaggtgacaactgtgag
aagaacataaatgagtgtgcatcagggccttgtctgaaccaaggtatctgtagagatgga
ataaacagttacacgtgcgagtgtagggcaccattcaaaggtgaacactgccaaaatgag
caggatccttgtgcctctcatccatgtgagaggggaggagtgtgtcttccatctccagat
tacacttcttatacctgtcgatgtccacctggttggcaaggtacacgctgcaaagaggac
gtgaatgaatgcacacggaacccttgcaaaaatggtggtcgttgcataaacagtcaaggg
agctatatgtgtgactgcacacgtggatacagtgggcacaactgtctgactgacattgac
gactgttcaccaaacccgtgcatgaacggaggctcgtgtgtggacaaagttgcaagtttc
tcctgtgactgtcgcccgggtttcgaaggggagcgctgtgaaactgaagtagatgagtgc
gccagccagccctgcagaaatggggccacatgccaggactatgtcaacagctttgtatgc
aactgcgaaccaggctttaatggaattcagtgtgaacacaacatccctgaatgcactgag
agctcatgtctgaataatgggacctgcatcgacgacatcaataccttttcttgccgttgt
cgtcctggcttttatggggttttctgtgagtatgaacagaacgagtgcgactctcagccc
tgtaagaacggagggacctgcaccgatggcctgggcacttaccgctgcacctgtcccgtg
cgatacagtggactcaactgccagaactttgtaaacctgtgcagccaagtgcgctgtcac
aacggtggctcttgctctcaaactggaacttcctggaactgtcactgtcagatgggatgg
acaggactatactgtgacgtacccaacatgtcctgccaggactttgctgccaggaaaggg
ctggaagtggaaagtgtgtgtaagaacgcagggcgatgcatcaacgtaggaaactcccat
cggtgcgactgtcagcccggatacacgggcagctattgtaaagagatggtggatgagtgt
cagtcaaacccgtgtcggaatggagctacatgcaaggactaccagggcacatacgagtgc
atgtgcaaaccaggttatcagggggtgaactgtgaatatgatgttgacgagtgccactct
aaaccctgcctcaacggagggacatgtatcaacctcatcaaccgttttacctgtgcctgc
ccgccaggaacacatggactgcagtgtgaggtgaatgaggacgactgcgctcctaaacct
ggctcctctgagccacgctgtcgtaacggaggacagtgtgtggatggcgttggccgctac
acgtgctcctgccttccagggtttgttggtgatctctgtgagggggacgtcaacgaatgc
ctgtctgggccgtgccatgctcctggcagcctggactgcgttgagctggtcaatgattat
cagtgtctctgtcgccttggatacacaggtcgccattgtgaatccatggtggatctgtgt
ctgtctaagccctgccgtaatgaaggtgtctgctccatgaacatgagttctgtacacggc
tacacctgctcctgtcctcctggctttactggattcagctgtggtgaaataaaagactac
aactgtgcaaaactgcgttgccagaatggtggtcgctgcattgagtcctcaggtggctac
ctgtactgccagtgtcagccaggcttcagcgggccacactgtgagaatgcgcagaggtgc
tccgtgacttgcagaaatgggggaacctgtatcaaagatccatccaacccattccagcac
agctgccactgtcccaataacttctacggacaatactgtgagacccggttaagtcagcaa
cctattccgaactgcccttatccgcagtgtaaacagcaggcaggagataaagtatgcgac
tatcaatgcaacatctatgaatgtcagtgggatggaggagactgctcgctcaacaggtta
tggccatgggaaaactgcaccgccagcgtgccctgttgggaactcttcaagaatggaaaa
tgtgatcaggagtgtgacaatccttcatgcctctttgatagctttgaatgccaagagacc
aaaacagactcctgcaagtatgataagtactgttcggaccactatggcgatgacatctgt
gaccggagctgctacaatgaggcttgtcgctgggatggcctggactgttccactgctatt
ccacccaatttggctatgggcacactggtcattgtggttcggctgcagccagaagagcta
cttggagacttgggccgtttcttacggtgcctaagtgccctactgcataccaacgtgcga
gtgaagcttgatgataagaataaaccaatggtgtacccatactatggaaaggaggatgag
cagggacgacatgcccataggagtagaagcaagcgggagctggacagggaggttataggc
tctgagatgcacctggaaatcgataaccgtgaatgttcacagacctcggctcaatgtttc
tccaacactgatgaggctgcatccttcatcatagcagcacactttagggatgaagtgcct
taccctctggtgtctgtagagagtaatccaactgtgaagtctgaagtaccatatctgatg
tacctggttggagtagctgtggtggttattctccttattctggtgctggggatgctagca
gccaagaggaagcacaagcatggtgttctgtggctgcctgatggcttcttagcaaataaa
aatgacaaaaggagagagcctgttggacaagacgacttcgacatgaagaatttcaagaca
ggggatggaggcatgattgacggaggtcagaatcagagatggcttgaagatgaagtccca
tccaaaaaaccaaaaactgaagacaaacctctcctgtccatcaacatggatggcggcgtt
gaccgaagggagtggactctgcagcatcgcaaagctgctgacatctctctcactcctcca
caggctggtctggatgctgactgtttggatgttaatgtcaagggacctgatggatttact
cctctgatgctggcgtcgctgcgtaatggtggagggccagactgcagcctgcatggagaa
gaggaggaagagagtgggggagatgaaccggggccgagtgtcatttcagacctgatcggt
cagggtgcttctttgatttctcaaactgatcgcacgggagaaacggcactccacctggca
gcccgctatgccagggcggatgctgctaagagactgttggatgctggagcagatcccaac
gctcatgacaacatgggtaggactccgctgcacgccgctgtggcagcagatgcacaagga
gtttttcaaattctcatccgtaatcgtgcaacggaactggatgcaaggatgaacgatggc
acgaccccactgatcctggcagccagactggctgtggagggaatggtggaggaactgatc
cactgccacgctgacatcaatgctgtggacgaccacggcaaatctgctctgcactgggca
gctgcagttaataatgtggaagccactcttgtgctcctgaagaatggggccaatcgtgac
atgcaagacaataaggaggagacccccttgtttctggctgccagagaaggcagcttcgag
gctgcgcaggttcttctcgaccactattcaaatcgtgacatcactgatcacctggaccga
cttcctcgcgacactgctcaagagcgcatgcatcatgacatcgtccgtctactggaccag
tacaacttggttcacagtccacacaacgggcctaaccacatggctggaggaaactccgtc
atgtgtggaggcaacggagcaggcttcatcaacatgcgtgccggacaacaaggcaagaag
agcaggaggggtggaggtggggcgaaggtgggaggagttggtgggggggtgaaggagctg
aaggacatgaaggcaaagagaagaaagaagcctgctggaggagaagggccaggtctgggt
gctggagtggcagcaggaaatgcagcaggaacaggcggaggcactgctaatggggtaaag
tcagccggaggacttccggagagctctgttactatgtcacccgttgactcgctggaatca
ccacactcgtacacgggggacatttctggctctgtttccaccacagcaaactccccccct
cttctgagcagccccacctccagaccaatcctcccccctgtgagccacatgctgggccag
cagcagggctgggtgggcatgagcaagcacgcctacggcggccacatgttcggcctcatc
gcgcatcagatggggggctcgcactccggcatgggccaacaccacggccagggcccgatg
ctgactcccatgaatgtcacggtgagcagggagcagctgccacccatcgtcacgtttcag
atgatgccccccggagccggccaggccatgctgaagcagccgcagggagggcaggtacag
gtcacgcagtcccaggggcagaacaccagccagggtcactcccagcaggggcccagccac
ctccactgcagccaggctatgatgtaccaggtgcctgagcagatgggtatgacacacggg
ctggcccacagcatgcagcacccccatacagtcaaccacagcagccacggagggatggag
ggccagtctcgacccgtcccctcctatcctcccatgccgagccccgtggataaataccca
acgcccccctcccagcacagctacaccaccgctggctcggaaggcaccacacccggccac
tctgcccacccggctagtgagcacccgtatctcactccttcacccgagtctccagacccg
tggtcctcgtcttcgccacactccaactcggactggtctgacgtcaccaccagccccact
cctctgggaaactcccaccacgcactgccaccatcgcaccacacacacattccagagcag
gcgcagatgcagccgcagtcgcaacagatgcagccgccttctcagcagccccagctggga
aacatgcaggtgtttgcgtag
DBGET
integrated database retrieval system
