Cololabis saira (Pacific saury): 133458128
Help
Entry
133458128 CDS
T09849
Symbol
si:dkey-110c1.10
Name
(RefSeq) unconventional myosin-Vb
KO
K10357
myosin V
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
133458128 (si:dkey-110c1.10)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133458128 (si:dkey-110c1.10)
04131 Membrane trafficking [BR:
csai04131
]
133458128 (si:dkey-110c1.10)
03029 Mitochondrial biogenesis [BR:
csai03029
]
133458128 (si:dkey-110c1.10)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csai04812
]
133458128 (si:dkey-110c1.10)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
133458128 (si:dkey-110c1.10)
mRNA cycle factors
P-body specific factors
133458128 (si:dkey-110c1.10)
Membrane trafficking [BR:
csai04131
]
Others
Actin-binding proteins
Myosins
133458128 (si:dkey-110c1.10)
Mitochondrial biogenesis [BR:
csai03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
133458128 (si:dkey-110c1.10)
Cytoskeleton proteins [BR:
csai04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
133458128 (si:dkey-110c1.10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
nSTAND3
AAA_22
Myosin_N
SieB
AAA_16
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
133458128
NCBI-ProteinID:
XP_061593682
LinkDB
All DBs
Position
13:11482088..11502031
Genome browser
AA seq
1652 aa
AA seq
DB search
MATLELYTKGETVWVPDPDAVWVSAQLLQDYTPGEKRLLLQLSNGDTAHFPVDSPSDLPP
LGNPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVAINPYDQLPIYGE
EVIDAYSGQDMTDMEPHIFSVAEEAYRTMTREERNQSIIISGESGSGKTVSAKFTMRYFA
VVGGASQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGGKGGIISANMRT
YLLEKSRVVFQASAERNYHIFYQLCASKDLPEMRSLKLDAPERFRYTNQGGQMQIPGTDD
SADLERTRNAFTILGVQSDQQMELFRILSAVLHLGNVNIQASGRSSDRSYIEADDRSLAI
FSKLLGVEGSQMAHWLCHRRLAVGGEMLVKPVPGQQALEARDALAKHIYGQLFTWTVQRL
NSALRTQREQAKTFIGVLDIYGFETFERNSFEQFCINYANEKLQQQFNRHVFHLEQEEYM
REELAWSRIEFSDNQQCINLIEGQLGMFDLLDEECRMPKGSDESWVRKLYDQHLNSKAHP
HFRKPRMSNSAFIVLHFADTVQYECESFLDKNRDTVFEELINILKASQSELVAELFQQRE
TSSQSVTNGSVRSGKRAAREHKLTVGFQFRQSLQMLMDTLNSTTPHYVRCIKPNDLKEPF
MFDPKRTVQQLRACGVLETIRISAAGYPSRWTYEEFFSRYRVLLGGPQEQTQDLCRRALP
QLIPDPDQYCFGKTKVFFRAGQVAVLERLRADRLRVAAVIIQSQVKGWLARIRYSRICWA
AVTIQRYSRGTLARRLAQTRRYTKAVLVIQKTYRMVVVRQMFLTIRQATLTIQAFTRGTL
ARRTYRQLVVEQAAVLLQARARGWLARRAYRRVRAAVVFMQCCVRRRAARRELLKLKTEA
RSVEKYRELNKGMEVKLIQLQLRADQEARESAALRETLNAERDAAGAELVALRSIVQKLE
SQKLEKPPPPPVISEKEVEERRRAEEKAAQEILQLTQELRELQKEKDNVTCEKEDLSARL
HEQEETQEECVQQAVFKASTALRAELDDEKEKYQGLLREFSRLEQRYDNLREMSLLTERT
KGHRRTDSTQSLEPLSPSFSPSFSPSFSPLSPFQPSLPSPDEVRRISVTSPPLERSLSVR
SSDTTLDQLMEKMDVAKAVKMSGEDLEHAYDAVRVANKFLESQLRKQQSQTEEELEALRL
QLRQAISCSSSSAQTQELQEMLVARECECVRLRRELKELRNTTSLRRLLTQGFPSPSRSP
HVKPAAVTGLLECRKTDKNRLIKAIISDIRADSALSLPPGLPASVLFLCVRQADCSGDQA
HARSICSAAVTAMKAALKKHTNDVDMSALWLKNVCLLHDLLNQHSPKQALCSDELVPLTT
DLSDLVRALSDLCIQAYQQLLSITGTVLHSIIVAALLESETIAGLSGSAVKAAASRKGAG
AGSGPRPVGGDAPTMASVLRELGSLHAAMTRQALPQSLTEQAFHQLTYLICACAFNNVLL
RKDMCCCSRGMQIRFNVSLLEEWLRSRGLQGGGAVASLEPLIQAAQLLQVGKKTKADAEA
VVRTCTALSSKQIVKILSLYTPNSDLDERVTLNFIRTVQGLLNDGSHSQPLQLMMDHRRA
FPVTFPSSPPPVVSADELAVPDSLKISFLRRV
NT seq
4959 nt
NT seq
+upstream
nt +downstream
nt
atggcaactctggagttatacacaaagggggaaactgtgtgggttcctgatccagatgca
gtctgggtttcagcccagctcctccaggactacacacctggagaaaaacgactgctgcta
cagctctccaatggcgacacggcccatttccccgtggactctccatctgacctcccaccg
ctggggaaccctgacatcctggagggcgagaatgacctgacggctctcagctttctccac
gagcctgctgtcctgcacaatctgcgggttcgatttctggactacagcagcatttacaca
tactgtggcattgtgctggtagccatcaacccctatgaccagcttcccatatacggcgag
gaggtgatcgatgcctacagcggccaggacatgaccgacatggagcctcacatcttttct
gtggcagaagaagcctaccgcaccatgaccagggaggagaggaaccagtccatcatcatc
agcggggagtccggctcaggaaaaactgtctcagccaagttcaccatgcgatactttgct
gtggttggaggagcatcgcagcagaccagtgtcgaggagagagtcctggcctccaacccc
atcatggagtctatcgggaatgctaaaaccactcgcaatgacaacagcagtcgttttggg
aagtacattgagatcggctttggcgggaaggggggaatcatcagtgcaaacatgaggaca
tatctgctggagaagtcacgggtcgtcttccaggcgtcagcagagagaaactaccacatc
ttctatcagctgtgcgcctccaaagacctgcctgaaatgagatccctcaaactggatgca
cctgagcgtttccgctacaccaaccaggggggacagatgcagatacccggcactgacgat
tcggcggacctggagcgcactcgcaacgctttcaccattcttggtgtgcagtccgaccag
caaatggagctgttcaggatcctgtcagcagtgctccacttaggaaacgtcaacattcag
gccagcgggagaagctctgatcggagttacattgaggcagatgaccggtctttagcaatc
ttctccaagctgttaggcgttgaaggatcacagatggctcactggctgtgtcatcgcaga
cttgcggtaggaggggagatgctggtcaagcctgtgcctgggcagcaggctctggaagcc
agagacgcgctggctaaacacatctacggtcagctgttcacatggacggtccagaggctc
aactccgccctgcgcactcagagggaacaggccaaaaccttcataggagtcttggatatc
tacggattcgagacctttgagaggaacagttttgagcagttctgcataaattatgccaat
gaaaaacttcagcaacagtttaacaggcatgtgttccacttggagcaggaagagtacatg
cgtgaggagctggcctggagcaggattgaattcagtgacaaccaacagtgtatcaacctc
atcgaggggcaactgggcatgtttgatctgttagatgaggagtgcaggatgcctaaaggt
tcagatgaaagctgggtgcgcaagctgtatgatcaacacttgaacagcaaggcccatcct
cacttccggaaacctcggatgtccaacagcgcctttatcgttttacactttgctgacaca
gtgcagtatgaatgtgaaagctttttggacaagaaccgagacacggtctttgaagagctc
attaacattctcaaagccagtcagtctgagctggtggccgagctgttccagcagcgggaa
acctcttcccaatctgtgaccaatggaagcgtccgttctgggaaaagagccgccagagaa
cataagctgaccgtcggcttccagtttcgtcagtcccttcagatgttaatggacactctc
aacagcactacacctcactacgtccgctgtatcaaacccaatgacctaaaagaacctttc
atgtttgaccctaaaaggacagtgcagcagctgagagcctgtggggtgctggagaccatt
cggatcagtgcagcaggttacccgtccaggtggacatatgaggagttcttcagcaggtat
cgcgttctgcttggagggcctcaggagcagacccaggacctctgcagacgagccctaccg
cagctcatcccagacccggaccagtactgctttggaaaaaccaaagtgttcttccgggcc
ggtcaagtggcggttctggagaggctgagagccgacaggctgcgcgtggccgccgtgatc
atccagagccaggtcaaagggtggctggcacggatcagatactccaggatctgctgggcg
gccgtcaccatacagagatacagcagaggaactctggcccggcgactggctcagactcga
cgctacacgaaggcggtgttggtgatccagaagacgtaccggatggtggtcgtcagacag
atgttcctcaccatccgacaggccactctcaccatccaggccttcaccaggggcacgctg
gcacgccgcacatacagacagctggtggttgagcaggctgccgtgttgcttcaggcgaga
gcgcgtgggtggctggcgaggcgggcgtacaggcgggtgcgtgcagccgtggtgttcatg
cagtgctgcgtgcgccgcagggccgccaggagagagctgttgaaactgaagaccgaggca
cgctcagtggagaagtacagagagctcaacaagggcatggaagtcaaactgatacagctg
cagctgagagcggaccaggaggcaagggagagtgccgccttgagagagaccctcaatgca
gaacgggatgctgccggtgcggagctggtagctctgagatcgatcgtacagaagctagag
agccagaaactggagaagcctcctcctcctccagttatcagcgagaaggaggtggaggaa
aggaggagagctgaggagaaagctgctcaggagatacttcaactcacacaagagttgcga
gaattacaaaaagagaaggacaatgttacctgtgagaaagaagatctttctgctcgcctg
catgagcaagaagaaactcaggaagagtgtgtgcagcaggctgtgtttaaggcgagcacg
gctcttcgggcagagctggacgatgagaaggaaaagtatcagggtctcctgagggaattc
agccgactggagcagagatatgacaacctgagggagatgagtctgctcaccgagcgtacc
aagggccacagaaggaccgactccacccagagcttagagcctctctctccttccttctct
ccctccttctctccctccttctctccgttgtcgcccttccaaccttccctcccatccccg
gacgaggtgcgcaggatcagcgtgacctctccccccctggagaggagcctctccgtgagg
agctccgacacgacactggaccagctgatggagaagatggatgtggccaaggcggtgaag
atgagcggagaagacttggagcatgcttacgatgcagtacgggtggccaacaagtttctg
gagagccaactgcggaagcagcagagtcagacggaggaggaactggaagctctgaggctc
cagctccgtcaggccatctcttgttcatcatcttctgcacagacacaggagctccaggag
atgctggtagccagagagtgtgagtgtgtgaggctgaggagggagctgaaggagctcaga
aacaccacgtcactcagacgactcctgactcaaggtttcccgtcaccttcccgctcacct
cacgtgaagccggcagcagtcaccggtctgctggaatgtaggaaaacggataaaaacaga
ctcatcaaggctataatctcagacatccgcgctgacagcgcgctgtctctgccccccggg
ctgcccgccagcgtgctcttcctgtgtgtccgtcaggccgactgcagcggggaccaagcc
cacgctcgctccatctgcagcgcggctgtcaccgccatgaaggccgctctgaagaaacat
actaacgatgtagacatgtctgccctgtggctgaaaaacgtctgtctgttgcacgacctg
ctgaaccagcactcacccaaacaggctctttgctcagacgagctggttcctctgaccacc
gacttgagcgacttagtccgcgccctgagtgacctctgcattcaggcttatcagcagctc
ctctccatcactgggacagtcctacacagcatcatagtcgccgccttgttggagagcgag
accattgcgggtctgtccggctcggcggtgaaagcggccgcctccaggaagggagcagga
gcgggctcgggcccccggcccgtagggggagatgctcccacgatggcctccgtgctgagg
gagctcgggtcgcttcacgccgccatgacccgccaggctctgccgcagagtctgacagag
caggccttccaccagctcacctacctcatctgtgcatgtgctttcaacaatgtgctgctg
agaaaagacatgtgctgctgcagtcgtggcatgcaaatacgctttaacgtgagcctgctg
gaggagtggctgcgtagccgaggtctgcagggagggggcgccgtggcctcgctggagcct
ctcatccaggcagctcagctgctgcaggtggggaaaaagaccaaggcggatgcagaggcc
gtggtccggacctgcacagccctctccagcaagcagattgtgaagattttgagcctgtac
actcctaacagtgatctggatgaaagagtcactttaaatttcatccgcactgttcagggc
ctcctcaacgacggctctcacagtcagcccctgcagctcatgatggaccacaggagagcg
tttcccgtcacattcccctcctcgcctccgcctgtcgtcagtgctgacgagctggccgtc
ccagactccctcaagatctcctttctacgcagagtctaa
DBGET
integrated database retrieval system