Cololabis saira (Pacific saury): 133458140
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Entry
133458140 CDS
T09849
Symbol
hcn2b
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
csai04040
]
133458140 (hcn2b)
Ion channels [BR:
csai04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
133458140 (hcn2b)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
LPD1
Motif
Other DBs
NCBI-GeneID:
133458140
NCBI-ProteinID:
XP_061593709
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Position
13:complement(12195172..12250858)
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AA seq
1006 aa
AA seq
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MKRFTRGGGAASAARKTSSSSTELWLLQREESAPFSATGSALSCQRDAACSRGDSDSDHR
TRGDLGMICNKNGDCRREGASSGSLSSLISRQDDQADGVVVSEEEGTGLAGSMDGTVPSA
GPLTPGPLTPGPLTPGPGAEVKKDSRVSFSYAPTKGQTSGRQSRSSIAFTKSEDGCSQIV
PEDDGEYRGNQTYMQRQFSSMLQPGVNKFSLRMFGSQKAVEKEQERVKSAGNWIIHPYSD
FRFYWDFTMLMFMVGNLIIIPVGITFFKDETTTPWIIFNVVSDTFFLMDLVLNFRTGIVF
EDNTEIILDPKKIKKKYLKSWFVVDFVSSIPVDYIFLIVEKGIDSEVYKTARALRIVRFT
KILSLLRLLRLSRLIRYIHQWEEIFHMTYDLASAVVRIFNLIGMMLLLCHWDGCLQFLVP
MLQDFPSDCWVSLNKMVNDSWSELYSFALFKAMSHMLCIGYGRQAPESMSDIWLTMLSMI
VGATCYAMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPAEFRQKIHDYYEHRYQ
GKMFDEESILEELNEPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLRFEVFQPGD
YIVREGTIGKKMYFIQHGVLSVLTKGNIGMKLMDGSYFGEICLLTRGRRTASVRSDTYCR
LYSLSVDNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILMHKVQHDLNSGVFNNRENE
MIQEIVKYDREMVQQVDVQQPLAMSMTPPCSSIQPRDSAIATLQQAVAMNFCPPMQGNSA
GAGSLQSPRMVRRFQVIQNVPSPVPASPLLHAPGVFAPVLASPPVQSPLVAGGRSFQYGS
SGLACPISGSQLSLAAQQHTASPTHWPGARKSSHSLQLVSLGQDARVLSASQPSLPHEGA
QPAAPSPPQSTRVSSTSIGPPQTPSGHTSVRSALPHRVVLPTQMSAGAFPAASLPGSVHA
FAGAAGLTVGALGTSQADSGRPKKDSVVSLPDTEHIKVRSRLSSNL
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggtttactcgcggaggcggggccgcgtccgctgcgcgtaaaacctccagcagc
agcacggagctgtggctcctgcagagggaagagtccgcacctttcagtgccactggctca
gctctgtcatgccagagggatgctgcttgcagcagaggcgactcagactcggaccacagg
accagaggggacctcgggatgatatgcaacaaaaacggagactgtagaagggaaggggcc
agttccgggagcctctcctccctcatctcaaggcaggatgatcaagcagatggagttgta
gtgagtgaggaggagggcaccgggctggctgggagcatggacggcaccgtgccctcagcg
gggcccctgacaccggggcccctcacaccggggcccctgacaccggggccgggggccgag
gtcaaaaaagactccagagtttccttttcctacgcgccaactaaggggcagacctctggt
cggcagtcgagaagttctatcgctttcaccaagtcagaggacggctgctctcagatagtt
ccggaggatgatggggagtaccgggggaaccagacgtacatgcagcggcagttcagctcc
atgctgcagcccggagttaacaagttctccctgcgcatgttcggcagccagaaggcggtg
gagaaggagcaggagcgggtaaagtcagcggggaactggattattcacccgtacagcgac
ttcaggttttattgggacttcaccatgctgatgttcatggtgggaaacctgatcatcatc
ccagtaggcatcaccttcttcaaggacgagacaaccacaccctggatcatcttcaacgtt
gtctctgacaccttttttctcatggacttggttcttaacttcaggacagggatcgttttc
gaggacaacactgagatcatcctcgatcccaagaagatcaagaaaaagtacctcaagagc
tggtttgtggtggactttgtctcctctattcctgtggattatatcttcctcatcgtggag
aaggggatcgactctgaggtgtacaaaacggcccgggcgctccgcatcgtccgcttcact
aagatcctcagcttgctgcgcctgctccggctgtccagactcatccggtacatccaccag
tgggaggagatcttccacatgacatacgacctggcgagtgccgtggtgcgaatattcaat
ctgattgggatgatgctgctgctgtgccactgggacggctgcctgcagttccttgttccc
atgctgcaggattttccatctgactgctgggtctccctcaacaagatggtgaatgactca
tggagtgagctctactcatttgccctctttaaggccatgagccacatgctgtgcattgga
tatggcaggcaagctccagagagcatgtcggacatctggctgaccatgctcagtatgatc
gtaggagccacctgctacgccatgttcatcggccatgcaactgcactcatccagtctctt
gattcgtctagacgccagtaccaggaaaagtacaagcaagtggaacagtacatgtcgttc
cacaaactaccggctgagttccgacagaaaatccacgactactacgagcacagataccag
ggcaagatgtttgatgaagagagcatcctggaggagcttaatgagcctctgcgcgaggaa
atcgtcaacttcaattgccgtaagctggtggcctccatgccgctgtttgccaatgctgac
cccaactttgtgacagccatgctcaccaaactgagatttgaggtcttccagcctggagac
tacatcgtcagagagggcaccattggcaagaagatgtacttcatccagcacggggtgctg
agtgtcctgaccaaaggaaacatcggcatgaagctgatggacggctcctactttggagag
atctgtctgctgactcgtggccgacggacggccagcgtgcggtcagacacctactgtcgc
ctgtactctctatcggtggacaatttcaacgaggtgctggaggagtaccccatgatgagg
agggcctttgagacggtcgccatcgacagactggacaggataggcaagaaaaactcaatc
ctgatgcacaaagttcagcatgacctcaactcgggtgttttcaacaaccgtgagaacgag
atgattcaggagatcgtgaaatacgatcgagagatggtccagcaggtggacgtgcaacaa
ccactggccatgtccatgacacctccatgttcctccatccagcctcgagattcagccatc
gctactttgcagcaggccgtagccatgaacttctgtcctcccatgcagggaaactcggcg
ggagcggggagcctgcagtctcccaggatggtgaggaggttccaggtcatacagaatgtg
cccagccccgtcccagcgtctccattactccacgctcctggggtctttgctccagttctg
gccagccctcccgtccagagcccgctggtagctggaggacgatcattccagtatggatcc
agcggcctggcctgtcccatttctggctcccagctttcactggcagcccagcagcacacg
gccagccctactcactggccgggcgcacgtaaaagctcccattctttgcagctggtcagc
ctgggccaagatgccagggtgttgtcggcctcccagccctcgttgccacacgagggggca
cagcccgctgcccctagtccaccacagtctactcgtgtttcctccacttccatcggaccc
cctcagactccgtcaggtcacacaagtgtccggagcgctttaccacatagagtggtgctc
cccacccagatgtcagcgggggctttccctgcagcatctctgcctgggtctgtgcacgct
tttgcaggcgctgcagggctgacagttggagctttgggaacaagtcaggcggattcggga
agacccaagaaagactcagtcgtgagccttcccgatacagagcatatcaaagtcagatcg
aggctatcatcaaacttgtga
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