Cololabis saira (Pacific saury): 133458146
Help
Entry
133458146 CDS
T09849
Symbol
cilp2
Name
(RefSeq) cartilage intermediate layer protein 1
KO
K24436
cartilage intermediate layer protein
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
csai04990
]
133458146 (cilp2)
Domain-containing proteins not elsewhere classified [BR:
csai04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
133458146 (cilp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
TSP_1
Ig_3
CarboxypepD_reg
Ig_2
TSP1_spondin
CarbopepD_reg_2
I-set
TSP1_CFP_C
TSP1_ADAMTS
ig
TTR_TEN1-4
Motif
Other DBs
NCBI-GeneID:
133458146
NCBI-ProteinID:
XP_061593716
LinkDB
All DBs
Position
13:complement(12632357..12652724)
Genome browser
AA seq
1250 aa
AA seq
DB search
MLELNKLAFLLSCLAWLPLGQGSGMTRDMYNRNRRLAVNTFTDSQTTGVTEWTSWFNIDH
PGGNGDYERLEAIRFYYRERICARPTAMEARTTDWVAAVDTGEVVHSSLEKGFWCINKEQ
PLGRVCSNYHVRFQCPPVQSYWTDWTEWGSCSTTVCNDVGIQVRQRKCVSAQPMPLLFVP
ACQGHHSERMECSTPPCTAKWSPWGRWGVCSVTCGGGRRTRRRTCLRTSVTVQCSGRPVE
VQKCGKNPCPVKCQLVCAVGRPSEDCSRCVCKGHSLHGEIYTVTGVPVAGASVALASHPK
VIQARTDVKGQFRLTGVCSSSSTSVTIKKEKFAPITVSTSSNTTGLSWLRAVLRSAEKPY
IVKHPEDKVRYEGGRVLLCCTATGSPAPDKYYWYHNGTLLDRKFYKYEEDLVLRDLKPEQ
SGQYYCKTSGPAGSIKSSPAILTVIAKGTPACSSTPESHLVRLPMDCVQPGTNSKYYNAG
RCPFNKCAGSLDFDMRCRDGTGFCCGVQTMESRVIDCGSYSLPIKAVANCGCQKCVQPTV
LVRGRVATADNGEPLRFGHIYIGKERVGTTGYQGGFTLQIAPDTQRLVVNFVDPTEKFLD
TPKVFIFDKKGGSIYHDVKVMRKQIPIDINAAETNFIDLGEIKGEDPIGQLVIPPNSFHK
DNGEVYEGTVKASVTFIDPRNITTAAAAPGDLNFVDDEGDMLPLRTYGMFSVDFRDETNK
EMLGAGAVQVLLDTQHVKMQEHIPKMKLWSLNPDTGVWEEESDFSYSTTTSGGHGRSKRE
ERTFLIGNMEIRERRLFNLDVPENRRCYVKVRAYMSDKFLPTEQLEGVVISLINLEPKPG
YSSNPRAWGRFDSVITGPSGACLPAFCDAMRPDAYTAYVTAMLSGEELEAAPSSPKMNPN
IIGVSQPYLDKIDYQRSDHDDPALKKTAFRINLAKPNQNNLDETNGPIYPYQNLIACENA
PVDANHFRFFRVEKDKYEYNVVPFEENDLTTWTGDYLSWWPNPQEFRACFIKVKIHGTKE
VMIRSRNMGGTHPQTKEKLYGIRDIRSTRDMREANTSAACVEFKCSGMLYDQAEVDRSLI
SLLPQGNCRRVGVNNLLHEYLIKHPPVAQSNDSHAFTMLAPVDPLGHNYGIYTVTDQNPR
VAKEIAIGRCFDGTSDGFSREMKSDSGVAMTFSCPERKINRESLFQRLQTNPSQTLSQMA
RDMRELNRLQVPRSATQVVAYPSEQQDGTQGRRVSSSTRRRSSMRVQQRQ
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgttggaattaaataaactggcatttctgctgtcttgtctggcctggttgcctctgggg
caaggatcggggatgaccagagacatgtacaacaggaacaggagactggctgtcaacaca
ttcactgactcacagacaacaggcgtgactgagtggacctcttggttcaatatcgaccat
cccgggggaaatggagactacgaacgcctggaggccatccgtttctactacagggagaga
atctgtgctcggcctacggctatggaggctcgcacaacagactgggtggcagctgtagat
accggcgaagtggtccactcgagtttagagaagggcttctggtgcatcaacaaagagcag
ccacttggccgtgtctgttccaactaccatgttcgatttcagtgtcccccagtgcagagc
tattggactgactggactgaatggggctcttgttcaaccacggtttgcaacgatgtggga
atccaggttcgtcaaaggaagtgtgtgagtgctcagcccatgcccctgctgtttgttcca
gcatgtcaggggcaccactcagagaggatggagtgctccacccccccatgtacagccaag
tggagtccatggggtcgttggggggtgtgctcggtgacctgtggagggggtcggaggaca
aggcgacggacctgtctgaggacctcagtgacagtgcagtgttcaggccgacctgttgaa
gtacaaaagtgtggaaagaatccatgcccagtcaaatgtcagctcgtctgcgcagtaggt
cgtcctagtgaggactgcagccgttgcgtgtgtaagggtcattccctgcatggagaaatc
tacacggtgactggagtcccagtggcaggagcaagtgtggctctagccagccatcccaaa
gtcattcaagctcgtacggatgtcaaagggcagttcaggctcacaggagtctgctcctcc
agttcaacttcagtcactatcaagaaggagaagtttgccccgataactgtctcgacctcc
agcaatacaacagggttgtcctggttacgggctgtccttagatccgcagaaaaaccatac
atcgtgaagcacccagaggacaaagtacgttatgaaggaggacgggtgctgttgtgctgc
acggcaacaggatcaccggcacctgacaaatactactggtaccacaatgggactctgctg
gacagaaaattctacaagtatgaagaggacctcgtactgcgtgatctaaagccagagcag
tcaggacagtattattgcaaaaccagcggccctgcaggcagcataaagtcatccccagcc
atccttaccgtcatcgcaaaaggaacaccagcatgcagttctacccctgaatcccacctc
gtcagactaccaatggactgtgttcaacctggaaccaactccaagtactacaatgctggt
agatgccctttcaacaaatgtgctggctccctagactttgatatgcgctgcagagatgga
actggattctgttgtggggtccagacaatggagagccgagtcattgactgtggtagctac
agtcttcctatcaaggccgtggcaaactgcggctgtcagaagtgtgtgcagccaactgtt
ctggtacgtggcagagtggcgactgctgacaatggcgagcctctgcgttttggacacatc
tatattggtaaagaaagagtaggcaccacaggataccaaggaggcttcactttgcaaatt
gctccagatacccaacgattagtggtgaattttgttgaccccactgagaagtttcttgac
actccaaaagtattcatctttgacaagaaaggtggctccatctatcatgacgtgaaagtg
atgaggaagcagataccaattgacatcaatgctgcagaaaccaattttattgatttagga
gaaattaaaggggaggacccaatagggcaattggtcattcctcccaattccttccataag
gacaatggagaagtctatgaggggactgtgaaagccagcgtcacattcattgatcctaga
aacatcacaacagcagctgcagcacctggagacctcaactttgtcgatgacgaaggtgac
atgctcccattgaggacatatggcatgttctctgtggacttcagagatgagaccaataag
gaaatgcttggagctggagctgtccaagtcctcctcgacacacagcatgttaaaatgcag
gaacacattcccaaaatgaagttgtggtctttaaacccagacacaggtgtgtgggaggaa
gagagtgacttctcctacagcacaacaacttctggaggtcatgggcggagcaagcgtgag
gagcgtacattcctcataggcaacatggagatcagagaacgcagactcttcaacttggat
gtccctgaaaacagacgctgttatgttaaagtccgtgcatacatgagtgacaaattcctt
cctactgaacaactggagggtgttgtaatcagtttgataaacctggagccaaaacctggt
tattcgtctaaccccagggcatggggtcgctttgacagcgtcataactgggcccagtgga
gcctgcttgccagctttctgtgatgccatgaggcctgacgcttacacagcttatgttact
gcaatgctaagtggagaagaattggaggcagctccttcttccccaaagatgaatccaaac
atcattggagtgtctcagccctatctagataaaatagactaccagcgttcagaccatgat
gatccagctctgaagaaaacagccttcagaatcaacttggcaaagcctaaccaaaacaat
cttgatgagaccaatggaccaatatatccataccagaatttaatagcttgtgaaaatgcc
cctgtggatgcaaaccacttcaggttttttagagtggaaaaggacaagtatgagtacaat
gttgttccctttgaggagaatgatttgacaacctggacaggagactacctctcctggtgg
ccaaaccctcaggagttcagagcatgcttcatcaaagtgaagattcatggaacgaaggaa
gtgatgatcaggtcgaggaatatgggaggaacacacccacagacaaaagaaaaactttat
ggtattagagacattcgcagtacccgtgacatgcgagaggccaacacctcggctgcctgt
gtcgaattcaaatgtagtggcatgttatatgatcaagcagaggtggatagatcactcata
tcattgcttccacagggtaattgtcgcagggttggtgtcaacaatctcctacatgagtat
ctcattaaacatccaccagtcgctcaaagcaatgattcacatgctttcaccatgttggca
cctgtggatcctctgggacacaactatggaatctacactgtcacagaccagaaccccaga
gtggccaaagagatcgctattgggcgctgctttgatggcacctcagatggtttctccaga
gagatgaagtcagattctggagtggctatgacgttcagctgtccagagaggaaaattaac
agggaaagcctcttccaacgtcttcagaccaaccccagccagacattgtcacagatggca
agggatatgagggagttaaaccgcctgcaggtgccgagatcagccacccaggtggtggct
tatccctcagagcagcaggatgggacccagggtcgcagagtgagttcttcaaccaggagg
agatcatcaatgagagtgcagcagcgtcagtag
DBGET
integrated database retrieval system
