Cololabis saira (Pacific saury): 133458190
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Entry
133458190 CDS
T09849
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
csai
Cololabis saira (Pacific saury)
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
csai04121
]
133458190 (si:dkey-183n20.15)
Enzymes [BR:
csai01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133458190 (si:dkey-183n20.15)
Ubiquitin system [BR:
csai04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133458190 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
zf-RING_2
zf-C3HC4_2
TRAF3_RING
DUF1232
Motif
Other DBs
NCBI-GeneID:
133458190
NCBI-ProteinID:
XP_061593813
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All DBs
Position
13:13781244..13784857
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AA seq
209 aa
AA seq
DB search
MCTSCQKESPQPCLSTSRRDWHCPVCLHTASFPVQTNCGHLFCAPCLLTYWRHGSWLDAI
SCPLCRQKVSVLLNLFNESQSDQQSKDVLGEITDYNKRYSGAPRRVSDYLCDAPLVLQLL
LRGLGTMGGLVWLFLFRVALCCVGTVVSISFPLVEPVSSSSSPLETDPSLCGLLGFLDDL
VVVILLLTCVININQQMAPDRGHSSNVIT
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atgtgtacgagctgtcagaaggaatctccacagccatgtctgtccacaagcagacgagac
tggcattgcccagtgtgcctgcacacagccagtttcccagtccagaccaactgtggtcat
ttattctgtgctccctgtctgctcacctactggagacacggctcgtggttggacgcaatc
agctgtcctctctgcaggcaaaaggtcagcgtgctgctgaacctcttcaacgagagccaa
tcagaccagcagtcaaaggacgtactgggggaaatcacagactacaacaaacgctattct
ggggccccacgaagggtgtcggactacctttgtgacgcccccctggttctgcagttactg
ctccgtggcctgggcaccatggggggacttgtgtggctcttcctcttcagggtggccctg
tgctgcgtggggactgtggtgtccatctccttccctctcgtggagcctgtatcctcatca
tcaagccccctggaaacagacccctccctgtgtggactgctggggttcctggatgacctg
gtagtggtcattctgctcctcacctgcgttatcaatatcaaccagcaaatggcgccagat
agaggacactcttccaacgtgataacctga
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integrated database retrieval system
