Cololabis saira (Pacific saury): 133458209
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Entry
133458209 CDS
T09849
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog isoform X1
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
csai
Cololabis saira (Pacific saury)
Pathway
csai04810
Regulation of actin cytoskeleton
csai05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
csai00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
133458209 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133458209 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csai03019
]
133458209 (cyfip1)
Messenger RNA biogenesis [BR:
csai03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133458209 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
133458209 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
133458209
NCBI-ProteinID:
XP_061593852
LinkDB
All DBs
Position
13:complement(14773421..14808336)
Genome browser
AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSVVYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNDMLEEGQEYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHTERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYEELLAD
IVNLCVDYYENKLYLTPSEKHMLLKVMGFGLYLMDGNSSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWTCTSISSSPQYNICEQMLQIRDDHMRFI
SELARYSNSEVVTGSGRQEAQKTDTEYRKLFDLALQGMQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFAQVTLRDPLRQAIKKKKNVIQSVLQAIRKTVCDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTIMDIEKFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILDTKEASM
MEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKILAGS
LLLDKRLRADCKNQGANIPWPPSNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALQKSL
ELAINRFESEDLTSIMELEGLLDINRLTHKLLSKFLTLDSLDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTILPFSQEFQRDKPSNAQPQYLYGSKTLNLAYNS
IFGTYRNFVGPPHIKVMCRLLGYQGIAVVMEELLKVVKSLLQGTIMQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNALLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHMVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLHWAGCMIIALLGQQRRFDILDFSYHLLKVQKHDGKDEVIKSVP
LKKMVDRIRKFQILNDEIFGILNKYLKSGDGENMPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaccgtgactttagaagatgccctctccaacgtggacctgctggaggagctg
ccactcccagaccagcagccgtgcattgagcccctcccctcctccgttgtgtaccagcca
aacttcaacaccaactttgaagacaggaatgcattcgtcaccggcattgccagatacatc
gagcaggccaccgtccactccagcatgaatgacatgttggaagaggggcaggagtatgcc
atcatgctctacacctggaggagctgctcacgtgcgattccacaggtgaaatgcaatgaa
caacccaacagggtggagatctacgagaagaccgttgaagtccttgagcctgaagttacc
aagctgatgaacttcatgtacttccagcgcacagcgatcgatcgcttctgtggggaggtc
cgtcgtctgtgtcacacagagcgcaggaaagactttgtctcagaggcgtacctgctaacc
ctcggaaagttcatcaacatgtttgcagtcctggatgagctgaagaacatgaagtgcagc
gtcaagaacgaccactctgcatacaaacgagctgctcagttcctcagaaagatgtctgaa
ccctcatccatccaggagtctcagaacttgtccatgtttctggcaaaccataacaagatc
acacagtcgttgcagcagcagctggaggtgatcaatggttatgaagagttgctggcagac
atcgtcaacctgtgtgtggattactacgagaacaagttgtatctcacccccagtgagaaa
cacatgcttctcaaagtcatgggttttgggttgtaccttatggatggaaacagcagcaac
atctacaaactggatgccaagaagagaataaacctcacaaagatcgacaagtttttcaag
caactccaggtggtcccactttttggtgacatgcagatcgagttgtcccgctacatcaag
accagtgctcactttgaagaaaacaagtccaggtggacgtgcacatccatatccagcagc
ccccagtacaacatctgcgagcagatgcttcagatcagagatgatcacatgcgcttcatc
tccgagctcgctcgttacagcaacagcgaggtggtgactggatcagggcgtcaagaggcc
cagaagacagatactgagtacaggaagctgtttgacttggctctgcagggcatgcagctg
ctctcccagtggagcgctcacgtcatggaagtgtactcctggaaactggtccatccaaca
gacaaatactccaacaaggagtgccctgacaacgccgaggagtacgagagagccacccgc
tacaactatacaagtgaggagaagtttgcccttgtggaggtgatggctatgataaaggga
ctgcaggtgctgatgggacggatggagagtgtgttcaatcacgccatccgtcacaccatc
tactcggcgctgcaggacttcgctcaagtgactttgcgtgacccactgcggcaggcgatc
aagaagaagaaaaatgtgatccagagcgtcctccaggccatccggaagacggtgtgcgac
tgggagaccggccgggagccccacaacgaccctgccctccgtggagaaaaagatccaaag
ggaggctttgacatcaaagttccccgtcgagctgtggggccctccagcacacagctctac
atggtgaggaccatgctggagtccctcattgctgacaaaagtggctccaagaagaccctg
cgcagcagtctcgagggccccaccatcatggacattgagaagtttcaccgcgagtccttc
ttttacacacatctgctgaactttagtgagactttgcagcagtgctgtgatctttcccag
ctttggttcagggagtttttcctggagctcacaatggggcgcaggatccagttccccatt
gaaatgtccatgccgtggatcctcaccgaccacatcctggataccaaggaagcttccatg
atggagtatgtgctgtatcccctggatttgtacaacgacagtgcacactacgctctgacc
aaattcaagaagcagttcctttacgatgaaatagaggctgaggtcaacttgtgctttgat
caatttgtctacaagcttgctgatcagatatttgcctactacaagatactagctggaagt
cttctgcttgacaagcgtttgagggctgactgcaagaaccagggcgccaacattccctgg
cctccctccaaccgctacgagactctgctgaagcagcgccacgtccagctcctcggccgc
tccatcgatctgaacagactcatcactcagagggtttcagcagctctccagaagtctctg
gagctggccatcaaccgcttcgagagtgaggatctcacctccataatggaactggagggc
cttctggatatcaatcgcctgacacacaagctcctcagcaagttcttgactctggacagc
ttggacgccatgtttcgtgaggccaaccacaacgtttcagcaccttatgggaggataacg
ctgcacgtcttctgggagctgaattacgacttcctgcccaactactgctacaatggctct
accaacaggtttgtgcgcaccatcctgccgttctctcaggagttccagagggataagccc
tccaacgctcagcctcagtatctgtacgggtcgaagaccttgaatctggcgtacaacagc
atatttggcacctacaggaactttgttggccctccacacattaaggtcatgtgcagacta
ctgggctaccagggtattgccgtggtgatggaggagctcctaaaagtcgttaaaagcctg
cttcagggcaccataatgcagtatgtgaagactctgatggaagtgatgcccaagatctgc
agacttccacgccacgagtatggctcgccaggcatcttggagttctttcaccaccagctc
aaggacattgtggagtacgctgagctgaagacggtgtgcttccagaacctgcgggaggtg
ggcaatgccctcctgttctgcctgctgagcgagcagagtctgtcgcaggaagaggtttgt
gatttgctccacgccgcacctttccaaaacattcttcccagagtccacgtcaaagaaggc
gagcggctggatgccaagatgaagcgcttggaggccaaatacacagcgctgcacatggtt
cctctgatagagcgtctcggtaccccacagcaaatagccatcgctcgtgagggcgacctg
ctgaccaaagagaggctctgctgcggcttgtccatgttcgaggtcatcctcacacgtgtg
cgaggtttcttggatgaccccatctggcgcgggccgttgccgagcaacggcgtgatgcac
gtggacgagtgtgtggagttccaccgcctctggagtgccatgcagttcgtctactgcatc
cccgtgggagcccacgagttcacagtggagcagtgctttggagatggcctccactgggcg
gggtgcatgatcatcgccctgctgggacaacagagacgctttgacatcctcgacttcagc
tatcacctccttaaggtgcagaagcacgacggcaaggatgaggtcatcaagagtgtgcct
ctaaagaagatggtggacagaatccgcaagttccaaatcctgaacgatgagatctttgga
atcctgaacaagtacctgaagtctggagacggagagaacatgccggtggaacacgtgcga
tgcttccagccaccgatacaccagtcgctcgccagcagctga
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